RNA–Protein interactions for RNA: ENST00000315869.7

TFE3-201, Transcript of transcription factor binding to IGHM enhancer 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TFE3, Length 3,415 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFE3-201ENST00000315869 IFT172Q9UG01 1749 aa18.89■□□□□ 0.61
TFE3-201ENST00000315869 DZIP1LQ8IYY4 767 aaKnown RBP18.89■□□□□ 0.61
TFE3-201ENST00000315869 USP19O94966 1318 aa18.89■□□□□ 0.61
TFE3-201ENST00000315869 CDK19Q9BWU1 502 aa18.88■□□□□ 0.61
TFE3-201ENST00000315869 CABP1Q9NZU7 370 aa18.88■□□□□ 0.61
TFE3-201ENST00000315869 PREX1Q8TCU6 1659 aa18.88■□□□□ 0.61
TFE3-201ENST00000315869 EXOSC9Q06265 439 aaKnown RBP18.88■□□□□ 0.61
TFE3-201ENST00000315869 KDM5AP29375 1690 aaKnown RBP18.86■□□□□ 0.61
TFE3-201ENST00000315869 WDR63Q8IWG1 891 aa18.86■□□□□ 0.61
TFE3-201ENST00000315869 TBC1D2Q9BYX2 928 aa18.86■□□□□ 0.61
TFE3-201ENST00000315869 POLR3AO14802 1390 aaPredicted RBP18.85■□□□□ 0.61
TFE3-201ENST00000315869 RIMS2Q9UQ26 1411 aa18.85■□□□□ 0.61
TFE3-201ENST00000315869 MVPQ14764 893 aaKnown RBP18.84■□□□□ 0.61
TFE3-201ENST00000315869 YTHDC2Q9H6S0 1430 aaKnown RBP18.84■□□□□ 0.61
TFE3-201ENST00000315869 MYOM1P52179 1685 aa18.84■□□□□ 0.61
TFE3-201ENST00000315869 QRICH2Q9H0J4 1663 aa18.82■□□□□ 0.6
TFE3-201ENST00000315869 TMEM131LA2VDJ0 1609 aa18.82■□□□□ 0.6
TFE3-201ENST00000315869 HSP90AA1P07900 732 aaKnown RBP18.82■□□□□ 0.6
TFE3-201ENST00000315869 METP08581 1390 aa18.82■□□□□ 0.6
TFE3-201ENST00000315869 RBM33Q96EV2 1170 aaKnown RBP18.82■□□□□ 0.6
TFE3-201ENST00000315869 C22orf23Q9BZE7 217 aa18.82■□□□□ 0.6
TFE3-201ENST00000315869 SOX12O15370 315 aa18.81■□□□□ 0.6
TFE3-201ENST00000315869 LTKP29376 864 aa18.81■□□□□ 0.6
TFE3-201ENST00000315869 NINLQ9Y2I6 1382 aa18.81■□□□□ 0.6
TFE3-201ENST00000315869 KIAA1210Q9ULL0 1709 aa18.81■□□□□ 0.6
TFE3-201ENST00000315869 A2ML1A8K2U0 1454 aa18.81■□□□□ 0.6
TFE3-201ENST00000315869 TBC1D32Q96NH3 1257 aa18.81■□□□□ 0.6
TFE3-201ENST00000315869 ELL2O00472 640 aaPredicted RBP18.8■□□□□ 0.6
TFE3-201ENST00000315869 RIPK4P57078 832 aa18.8■□□□□ 0.6
TFE3-201ENST00000315869 SSH1Q8WYL5 1049 aa18.8■□□□□ 0.6
TFE3-201ENST00000315869 LNPKQ9C0E8 428 aa18.8■□□□□ 0.6
TFE3-201ENST00000315869 ZRANB1Q9UGI0 708 aa18.8■□□□□ 0.6
TFE3-201ENST00000315869 TULP4Q9NRJ4 1543 aa18.8■□□□□ 0.6
TFE3-201ENST00000315869 A0A1W2PP64 1363 aa18.8■□□□□ 0.6
TFE3-201ENST00000315869 TNRQ92752 1358 aa18.79■□□□□ 0.6
TFE3-201ENST00000315869 FOXD4L1Q9NU39 408 aa18.79■□□□□ 0.6
TFE3-201ENST00000315869 NOB1Q9ULX3 412 aaKnown RBP18.79■□□□□ 0.6
TFE3-201ENST00000315869 TRIM27P14373 513 aa18.78■□□□□ 0.6
TFE3-201ENST00000315869 HSCBQ8IWL3 235 aa18.78■□□□□ 0.6
TFE3-201ENST00000315869 NEURL4Q96JN8 1562 aa18.77■□□□□ 0.6
TFE3-201ENST00000315869 TMPOP42166 694 aaKnown RBP18.77■□□□□ 0.59
TFE3-201ENST00000315869 SBNO2Q9Y2G9 1366 aa18.76■□□□□ 0.59
TFE3-201ENST00000315869 SETBP1Q9Y6X0 1596 aa18.76■□□□□ 0.59
TFE3-201ENST00000315869 ZC3H13Q5T200 1668 aaKnown RBP18.76■□□□□ 0.59
TFE3-201ENST00000315869 ARHGEF40Q8TER5 1519 aa18.76■□□□□ 0.59
TFE3-201ENST00000315869 L1TD1Q5T7N2 865 aaKnown RBP18.75■□□□□ 0.59
TFE3-201ENST00000315869 TMEM57Q8N5G2 664 aa18.75■□□□□ 0.59
TFE3-201ENST00000315869 DDX19BQ9UMR2 479 aa18.75■□□□□ 0.59
TFE3-201ENST00000315869 ALKQ9UM73 1620 aa18.75■□□□□ 0.59
TFE3-201ENST00000315869 PPP6R1Q9UPN7 881 aa18.75■□□□□ 0.59
TFE3-201ENST00000315869 GOLGA6L3A6NEY3 463 aa18.74■□□□□ 0.59
TFE3-201ENST00000315869 ATF7IPQ6VMQ6 1270 aa18.74■□□□□ 0.59
TFE3-201ENST00000315869 FYB1O15117 783 aa18.74■□□□□ 0.59
TFE3-201ENST00000315869 AAMPQ13685 434 aa18.73■□□□□ 0.59
TFE3-201ENST00000315869 C1orf115Q9H7X2 142 aa18.73■□□□□ 0.59
TFE3-201ENST00000315869 TERF2IPQ9NYB0 399 aa18.73■□□□□ 0.59
TFE3-201ENST00000315869 HSP90AB1P08238 724 aaKnown RBP18.73■□□□□ 0.59
TFE3-201ENST00000315869 HDGFL2Q7Z4V5 671 aaPredicted RBP18.73■□□□□ 0.59
TFE3-201ENST00000315869 PTPRMP28827 1452 aa18.73■□□□□ 0.59
TFE3-201ENST00000315869 AGLP35573 1532 aa18.73■□□□□ 0.59
TFE3-201ENST00000315869 ARHGEF28Q8N1W1 1705 aaKnown RBP18.72■□□□□ 0.59
TFE3-201ENST00000315869 IPO8O15397 1037 aaKnown RBP18.71■□□□□ 0.59
TFE3-201ENST00000315869 HMOX1P09601 288 aa18.71■□□□□ 0.59
TFE3-201ENST00000315869 MCM4P33991 863 aa18.71■□□□□ 0.59
TFE3-201ENST00000315869 ANKRD45Q5TZF3 282 aa18.71■□□□□ 0.59
TFE3-201ENST00000315869 ANKRD36BQ8N2N9 1353 aa18.71■□□□□ 0.59
TFE3-201ENST00000315869 NME9Q86XW9 330 aa18.71■□□□□ 0.59
TFE3-201ENST00000315869 THUMPD2Q9BTF0 503 aaKnown RBP18.71■□□□□ 0.59
TFE3-201ENST00000315869 CHMP5Q9NZZ3 219 aa18.71■□□□□ 0.59
TFE3-201ENST00000315869 DIAPH1O60610 1272 aaKnown RBP18.71■□□□□ 0.59
TFE3-201ENST00000315869 ZFYVE9O95405 1425 aa18.69■□□□□ 0.58
TFE3-201ENST00000315869 CCDC27Q2M243 656 aa18.69■□□□□ 0.58
TFE3-201ENST00000315869 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.69■□□□□ 0.58
TFE3-201ENST00000315869 ANTXR1Q9H6X2 564 aa18.68■□□□□ 0.58
TFE3-201ENST00000315869 TRAK2O60296 914 aa18.68■□□□□ 0.58
TFE3-201ENST00000315869 NUDT16Q96DE0 195 aaKnown RBP18.68■□□□□ 0.58
TFE3-201ENST00000315869 PANK2Q9BZ23 570 aa18.68■□□□□ 0.58
TFE3-201ENST00000315869 WASLO00401 505 aaPredicted RBP18.67■□□□□ 0.58
TFE3-201ENST00000315869 FAM43AQ8N2R8 423 aa18.67■□□□□ 0.58
TFE3-201ENST00000315869 RRS1Q15050 365 aaKnown RBP18.67■□□□□ 0.58
TFE3-201ENST00000315869 PHF23Q9BUL5 403 aaPredicted RBP18.67■□□□□ 0.58
TFE3-201ENST00000315869 TMEM2Q9UHN6 1383 aa18.66■□□□□ 0.58
TFE3-201ENST00000315869 SPATA31D1Q6ZQQ2 1576 aa18.66■□□□□ 0.58
TFE3-201ENST00000315869 PRKAR2BP31323 418 aa18.66■□□□□ 0.58
TFE3-201ENST00000315869 TRIM35Q9UPQ4 493 aa18.66■□□□□ 0.58
TFE3-201ENST00000315869 EID1Q9Y6B2 187 aa18.66■□□□□ 0.58
TFE3-201ENST00000315869 MYO3AQ8NEV4 1616 aa18.66■□□□□ 0.58
TFE3-201ENST00000315869 APBB1O00213 710 aa18.65■□□□□ 0.58
TFE3-201ENST00000315869 NAP1L5Q96NT1 182 aaPredicted RBP18.65■□□□□ 0.58
TFE3-201ENST00000315869 EMILIN1Q9Y6C2 1016 aa18.65■□□□□ 0.58
TFE3-201ENST00000315869 HDGFP51858 240 aaKnown RBP18.65■□□□□ 0.58
TFE3-201ENST00000315869 ATAD2Q6PL18 1390 aa18.64■□□□□ 0.58
TFE3-201ENST00000315869 ROBO2Q9HCK4 1378 aa18.64■□□□□ 0.58
TFE3-201ENST00000315869 AMOTL2Q9Y2J4 779 aa18.63■□□□□ 0.57
TFE3-201ENST00000315869 KIF16BQ96L93 1317 aa18.63■□□□□ 0.57
TFE3-201ENST00000315869 XRCC6P12956 609 aaKnown RBP eCLIP18.63■□□□□ 0.57
TFE3-201ENST00000315869 NUTM2GQ5VZR2 741 aa18.62■□□□□ 0.57
TFE3-201ENST00000315869 RRAGDQ9NQL2 400 aaPredicted RBP18.62■□□□□ 0.57
TFE3-201ENST00000315869 PRR36Q9H6K5 1346 aa18.62■□□□□ 0.57
TFE3-201ENST00000315869 CT47B1P0C2W7 299 aaPredicted RBP18.61■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms