RNA–Protein interactions for RNA: ENST00000315544.6

CNOT4-201, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 1 (best) BASIC

Gene CNOT4, Length 3,783 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-201ENST00000315544 ADGRF5Q8IZF2 1346 aa10.78□□□□□ -0.68
CNOT4-201ENST00000315544 CACNA1FO60840 1977 aa10.77□□□□□ -0.68
CNOT4-201ENST00000315544 RRP1P56182 461 aaKnown RBP10.77□□□□□ -0.69
CNOT4-201ENST00000315544 MYT1Q01538 1121 aa10.77□□□□□ -0.69
CNOT4-201ENST00000315544 PAPPAQ13219 1627 aa10.76□□□□□ -0.69
CNOT4-201ENST00000315544 RGPD5Q99666 1765 aa10.76□□□□□ -0.69
CNOT4-201ENST00000315544 THEMISQ8N1K5 641 aaPredicted RBP10.76□□□□□ -0.69
CNOT4-201ENST00000315544 FBXO41Q8TF61 875 aa10.76□□□□□ -0.69
CNOT4-201ENST00000315544 PAK3O75914 559 aaPredicted RBP10.76□□□□□ -0.69
CNOT4-201ENST00000315544 PLEKHF1Q96S99 279 aa10.76□□□□□ -0.69
CNOT4-201ENST00000315544 HNRNPUQ00839 825 aaKnown RBP eCLIP10.75□□□□□ -0.69
CNOT4-201ENST00000315544 NLRP13Q86W25 1043 aa10.75□□□□□ -0.69
CNOT4-201ENST00000315544 NCAPD2Q15021 1401 aa10.75□□□□□ -0.69
CNOT4-201ENST00000315544 PDE3BQ13370 1112 aa10.75□□□□□ -0.69
CNOT4-201ENST00000315544 KCNA6P17658 529 aa10.74□□□□□ -0.69
CNOT4-201ENST00000315544 RGS12O14924 1447 aa10.74□□□□□ -0.69
CNOT4-201ENST00000315544 ROBO2Q9HCK4 1378 aa10.74□□□□□ -0.69
CNOT4-201ENST00000315544 C1orf167Q5SNV9 1468 aa10.74□□□□□ -0.69
CNOT4-201ENST00000315544 PPP2R1AP30153 589 aa10.74□□□□□ -0.69
CNOT4-201ENST00000315544 C8orf34Q49A92 452 aa10.74□□□□□ -0.69
CNOT4-201ENST00000315544 ZNF777Q9ULD5 760 aaPredicted RBP10.74□□□□□ -0.69
CNOT4-201ENST00000315544 C14orf93Q9H972 538 aaKnown RBP10.73□□□□□ -0.69
CNOT4-201ENST00000315544 NCKAP5LQ9HCH0 1330 aa10.73□□□□□ -0.69
CNOT4-201ENST00000315544 CERKQ8TCT0 537 aa10.73□□□□□ -0.69
CNOT4-201ENST00000315544 CDCA7LQ96GN5 454 aa10.73□□□□□ -0.69
CNOT4-201ENST00000315544 RGPD2P0DJD1 1756 aa10.72□□□□□ -0.69
CNOT4-201ENST00000315544 SLFN5Q08AF3 891 aa10.72□□□□□ -0.69
CNOT4-201ENST00000315544 BACH2Q9BYV9 841 aa10.72□□□□□ -0.69
CNOT4-201ENST00000315544 C20orf194Q5TEA3 1177 aa10.71□□□□□ -0.69
CNOT4-201ENST00000315544 DCAF11Q8TEB1 546 aa10.71□□□□□ -0.69
CNOT4-201ENST00000315544 DDIT3P35638 169 aa10.71□□□□□ -0.69
CNOT4-201ENST00000315544 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.71□□□□□ -0.7
CNOT4-201ENST00000315544 LY75O60449 1722 aa10.7□□□□□ -0.7
CNOT4-201ENST00000315544 CARD11Q9BXL7 1154 aa10.7□□□□□ -0.7
CNOT4-201ENST00000315544 MRS2Q9HD23 443 aa10.7□□□□□ -0.7
CNOT4-201ENST00000315544 CCDC27Q2M243 656 aa10.69□□□□□ -0.7
CNOT4-201ENST00000315544 ANKRD36BQ8N2N9 1353 aa10.68□□□□□ -0.7
CNOT4-201ENST00000315544 NUP188Q5SRE5 1749 aa10.68□□□□□ -0.7
CNOT4-201ENST00000315544 ZNF335Q9H4Z2 1342 aaPredicted RBP10.68□□□□□ -0.7
CNOT4-201ENST00000315544 PANK3Q9H999 370 aa10.67□□□□□ -0.7
CNOT4-201ENST00000315544 SLIT2O94813 1529 aa10.67□□□□□ -0.7
CNOT4-201ENST00000315544 NSD2O96028 1365 aa10.67□□□□□ -0.7
CNOT4-201ENST00000315544 CASZ1Q86V15 1759 aa10.67□□□□□ -0.7
CNOT4-201ENST00000315544 NHSQ6T4R5 1651 aa10.67□□□□□ -0.7
CNOT4-201ENST00000315544 ANKLE2Q86XL3 938 aa10.67□□□□□ -0.7
CNOT4-201ENST00000315544 ADAMTS8Q9UP79 889 aa10.67□□□□□ -0.7
CNOT4-201ENST00000315544 GGT6Q6P531 493 aa10.66□□□□□ -0.7
CNOT4-201ENST00000315544 MS4A1P11836 297 aa10.65□□□□□ -0.7
CNOT4-201ENST00000315544 B4GALNT3Q6L9W6 998 aa10.65□□□□□ -0.7
CNOT4-201ENST00000315544 PLEKHG2Q9H7P9 1386 aa10.65□□□□□ -0.7
CNOT4-201ENST00000315544 LRP5O75197 1615 aa10.64□□□□□ -0.71
CNOT4-201ENST00000315544 ATP1B4Q9UN42 357 aaPredicted RBP10.64□□□□□ -0.71
CNOT4-201ENST00000315544 NINLQ9Y2I6 1382 aa10.64□□□□□ -0.71
CNOT4-201ENST00000315544 SBNO1A3KN83 1393 aa10.64□□□□□ -0.71
CNOT4-201ENST00000315544 BRPF1P55201 1214 aaPredicted RBP10.64□□□□□ -0.71
CNOT4-201ENST00000315544 EXOC6Q8TAG9 804 aa10.64□□□□□ -0.71
CNOT4-201ENST00000315544 ANTXR1Q9H6X2 564 aa10.64□□□□□ -0.71
CNOT4-201ENST00000315544 UBR2Q8IWV8 1755 aa10.63□□□□□ -0.71
CNOT4-201ENST00000315544 TOGARAM1Q9Y4F4 1720 aa10.63□□□□□ -0.71
CNOT4-201ENST00000315544 TMEM94Q12767 1356 aa10.63□□□□□ -0.71
CNOT4-201ENST00000315544 HSPA2P54652 639 aa10.63□□□□□ -0.71
CNOT4-201ENST00000315544 OVOS2A0A0J9YW53 1432 aa10.63□□□□□ -0.71
CNOT4-201ENST00000315544 OVOS2Q6IE36 1432 aa10.63□□□□□ -0.71
CNOT4-201ENST00000315544 A0A1W2PP64 1363 aa10.62□□□□□ -0.71
CNOT4-201ENST00000315544 MYH15Q9Y2K3 1946 aa10.61□□□□□ -0.71
CNOT4-201ENST00000315544 SOS2Q07890 1332 aaPredicted RBP10.61□□□□□ -0.71
CNOT4-201ENST00000315544 IRX6P78412 446 aaPredicted RBP10.61□□□□□ -0.71
CNOT4-201ENST00000315544 ATRNO75882 1429 aa10.61□□□□□ -0.71
CNOT4-201ENST00000315544 BCL9O00512 1426 aa10.6□□□□□ -0.71
CNOT4-201ENST00000315544 COL5A3P25940 1745 aaPredicted RBP10.6□□□□□ -0.71
CNOT4-201ENST00000315544 ZNF692Q9BU19 519 aaPredicted RBP10.6□□□□□ -0.71
CNOT4-201ENST00000315544 NSD3Q9BZ95 1437 aa10.6□□□□□ -0.71
CNOT4-201ENST00000315544 C5P01031 1676 aa10.59□□□□□ -0.71
CNOT4-201ENST00000315544 TAF1LQ8IZX4 1826 aa10.59□□□□□ -0.71
CNOT4-201ENST00000315544 BCANQ96GW7 911 aa10.59□□□□□ -0.71
CNOT4-201ENST00000315544 SKAP1Q86WV1 359 aa10.57□□□□□ -0.72
CNOT4-201ENST00000315544 RCAN3Q9UKA8 241 aa10.57□□□□□ -0.72
CNOT4-201ENST00000315544 FAM9BQ8IZU0 186 aa10.57□□□□□ -0.72
CNOT4-201ENST00000315544 TRIM35Q9UPQ4 493 aa10.56□□□□□ -0.72
CNOT4-201ENST00000315544 AATKQ6ZMQ8 1374 aa10.56□□□□□ -0.72
CNOT4-201ENST00000315544 USP31Q70CQ4 1352 aa10.56□□□□□ -0.72
CNOT4-201ENST00000315544 SCN11AQ9UI33 1791 aa10.56□□□□□ -0.72
CNOT4-201ENST00000315544 IGHDP01880 384 aa10.55□□□□□ -0.72
CNOT4-201ENST00000315544 KIAA1551Q9HCM1 1747 aa10.55□□□□□ -0.72
CNOT4-201ENST00000315544 CFAP70Q5T0N1 1121 aa10.55□□□□□ -0.72
CNOT4-201ENST00000315544 IPO9Q96P70 1041 aaKnown RBP10.55□□□□□ -0.72
CNOT4-201ENST00000315544 TJP1Q07157 1748 aa10.55□□□□□ -0.72
CNOT4-201ENST00000315544 TNS3Q68CZ2 1445 aa10.54□□□□□ -0.72
CNOT4-201ENST00000315544 ATP10DQ9P241 1426 aa10.54□□□□□ -0.72
CNOT4-201ENST00000315544 KIF13BQ9NQT8 1826 aa10.54□□□□□ -0.72
CNOT4-201ENST00000315544 MLECQ14165 292 aa10.53□□□□□ -0.72
CNOT4-201ENST00000315544 IL17RAQ96F46 866 aa10.53□□□□□ -0.72
CNOT4-201ENST00000315544 ZNF853P0CG23 659 aa10.53□□□□□ -0.72
CNOT4-201ENST00000315544 WWC1Q8IX03 1113 aa10.53□□□□□ -0.72
CNOT4-201ENST00000315544 DISP2A7MBM2 1401 aa10.52□□□□□ -0.72
CNOT4-201ENST00000315544 BCL9LQ86UU0 1499 aa10.52□□□□□ -0.73
CNOT4-201ENST00000315544 ITGB4P16144 1822 aa10.52□□□□□ -0.73
CNOT4-201ENST00000315544 RLBP1P12271 317 aa10.52□□□□□ -0.73
CNOT4-201ENST00000315544 CPDO75976 1380 aa10.52□□□□□ -0.73
CNOT4-201ENST00000315544 LAMB4A4D0S4 1761 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms