RNA–Protein interactions for RNA: ENST00000313863.10

MKS1-201, Transcript of Meckel syndrome, type 1, humanhuman

TSL 5 BASIC

Gene MKS1, Length 2,091 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-201ENST00000313863 SMC5Q8IY18 1101 aa17.46■□□□□ 0.39
MKS1-201ENST00000313863 ITPRIPQ8IWB1 547 aa17.46■□□□□ 0.39
MKS1-201ENST00000313863 HSCBQ8IWL3 235 aa17.46■□□□□ 0.39
MKS1-201ENST00000313863 PLEKHF1Q96S99 279 aa17.46■□□□□ 0.39
MKS1-201ENST00000313863 CHMP4BQ9H444 224 aaKnown RBP17.46■□□□□ 0.39
MKS1-201ENST00000313863 ATAD2Q6PL18 1390 aa17.45■□□□□ 0.38
MKS1-201ENST00000313863 CLTCQ00610 1675 aaKnown RBP17.45■□□□□ 0.38
MKS1-201ENST00000313863 GOLGA6L3A6NEY3 463 aa17.45■□□□□ 0.38
MKS1-201ENST00000313863 TRIM27P14373 513 aa17.45■□□□□ 0.38
MKS1-201ENST00000313863 ARHGAP31Q2M1Z3 1444 aa17.45■□□□□ 0.38
MKS1-201ENST00000313863 GGT6Q6P531 493 aa17.44■□□□□ 0.38
MKS1-201ENST00000313863 TERF2IPQ9NYB0 399 aa17.44■□□□□ 0.38
MKS1-201ENST00000313863 SIGLEC1Q9BZZ2 1709 aa17.44■□□□□ 0.38
MKS1-201ENST00000313863 CD109Q6YHK3 1445 aa17.44■□□□□ 0.38
MKS1-201ENST00000313863 U2SURPO15042 1029 aaKnown RBP17.44■□□□□ 0.38
MKS1-201ENST00000313863 MFAP1P55081 439 aaKnown RBP17.44■□□□□ 0.38
MKS1-201ENST00000313863 ALDH1L2Q3SY69 923 aa17.44■□□□□ 0.38
MKS1-201ENST00000313863 TSR2Q969E8 191 aaKnown RBP17.44■□□□□ 0.38
MKS1-201ENST00000313863 ZNF428Q96B54 188 aa17.44■□□□□ 0.38
MKS1-201ENST00000313863 DDX11L8A8MPP1 907 aa17.43■□□□□ 0.38
MKS1-201ENST00000313863 SSH1Q8WYL5 1049 aa17.43■□□□□ 0.38
MKS1-201ENST00000313863 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.43■□□□□ 0.38
MKS1-201ENST00000313863 A0A1W2PP64 1363 aa17.43■□□□□ 0.38
MKS1-201ENST00000313863 ISY1Q9ULR0 285 aaKnown RBP17.43■□□□□ 0.38
MKS1-201ENST00000313863 KIF20BQ96Q89 1820 aa17.42■□□□□ 0.38
MKS1-201ENST00000313863 CABP2Q9NPB3 220 aa17.42■□□□□ 0.38
MKS1-201ENST00000313863 TRIM35Q9UPQ4 493 aa17.42■□□□□ 0.38
MKS1-201ENST00000313863 FSD2A1L4K1 749 aa17.41■□□□□ 0.38
MKS1-201ENST00000313863 ZBTB40Q9NUA8 1239 aa17.41■□□□□ 0.38
MKS1-201ENST00000313863 NOB1Q9ULX3 412 aaKnown RBP17.41■□□□□ 0.38
MKS1-201ENST00000313863 CDC42BPGQ6DT37 1551 aa17.4■□□□□ 0.38
MKS1-201ENST00000313863 NPM1P06748 294 aaKnown RBP eCLIP17.4■□□□□ 0.38
MKS1-201ENST00000313863 PTMSP20962 102 aa17.4■□□□□ 0.38
MKS1-201ENST00000313863 RBM25P49756 843 aaKnown RBP17.4■□□□□ 0.38
MKS1-201ENST00000313863 SRPK2P78362 688 aaKnown RBP17.4■□□□□ 0.38
MKS1-201ENST00000313863 SNX21Q969T3 373 aa17.4■□□□□ 0.38
MKS1-201ENST00000313863 NEO1Q92859 1461 aa17.39■□□□□ 0.38
MKS1-201ENST00000313863 EIF5BO60841 1220 aaKnown RBP17.39■□□□□ 0.37
MKS1-201ENST00000313863 RIPK4P57078 832 aa17.39■□□□□ 0.37
MKS1-201ENST00000313863 NCOA3Q9Y6Q9 1424 aa17.38■□□□□ 0.37
MKS1-201ENST00000313863 DIAPH1O60610 1272 aaKnown RBP17.38■□□□□ 0.37
MKS1-201ENST00000313863 NUCB1Q02818 461 aa17.38■□□□□ 0.37
MKS1-201ENST00000313863 CIZ1Q9ULV3 898 aaPredicted RBP17.38■□□□□ 0.37
MKS1-201ENST00000313863 REREQ9P2R6 1566 aa17.38■□□□□ 0.37
MKS1-201ENST00000313863 TRAK2O60296 914 aa17.38■□□□□ 0.37
MKS1-201ENST00000313863 BRPF1P55201 1214 aaPredicted RBP17.38■□□□□ 0.37
MKS1-201ENST00000313863 TMEM57Q8N5G2 664 aa17.38■□□□□ 0.37
MKS1-201ENST00000313863 MRE11P49959 708 aa17.37■□□□□ 0.37
MKS1-201ENST00000313863 HDGFL2Q7Z4V5 671 aaPredicted RBP17.37■□□□□ 0.37
MKS1-201ENST00000313863 SLC52A1Q9NWF4 448 aa17.37■□□□□ 0.37
MKS1-201ENST00000313863 PNPLA6Q8IY17 1366 aa17.37■□□□□ 0.37
MKS1-201ENST00000313863 CALD1Q05682 793 aaKnown RBP17.36■□□□□ 0.37
MKS1-201ENST00000313863 GGNBP2Q9H3C7 697 aa17.36■□□□□ 0.37
MKS1-201ENST00000313863 PPIP5K1Q6PFW1 1433 aa17.36■□□□□ 0.37
MKS1-201ENST00000313863 FCHSD2O94868 740 aa17.36■□□□□ 0.37
MKS1-201ENST00000313863 SPRYD3Q8NCJ5 442 aa17.36■□□□□ 0.37
MKS1-201ENST00000313863 PTPRMP28827 1452 aa17.35■□□□□ 0.37
MKS1-201ENST00000313863 GCC1Q96CN9 775 aa17.35■□□□□ 0.37
MKS1-201ENST00000313863 DIP2CQ9Y2E4 1556 aa17.35■□□□□ 0.37
MKS1-201ENST00000313863 FYB1O15117 783 aa17.35■□□□□ 0.37
MKS1-201ENST00000313863 XRCC6P12956 609 aaKnown RBP eCLIP17.35■□□□□ 0.37
MKS1-201ENST00000313863 BMP2KLQ5H9B9 411 aa17.35■□□□□ 0.37
MKS1-201ENST00000313863 CHD1LQ86WJ1 897 aa17.35■□□□□ 0.37
MKS1-201ENST00000313863 MYO5BQ9ULV0 1848 aa17.34■□□□□ 0.37
MKS1-201ENST00000313863 ARHGAP45Q92619 1136 aa17.33■□□□□ 0.37
MKS1-201ENST00000313863 GBP4Q96PP9 640 aa17.33■□□□□ 0.37
MKS1-201ENST00000313863 SKOR2Q2VWA4 1001 aaPredicted RBP17.33■□□□□ 0.36
MKS1-201ENST00000313863 CFAP44Q96MT7 982 aa17.33■□□□□ 0.36
MKS1-201ENST00000313863 CD163L1Q9NR16 1453 aa17.32■□□□□ 0.36
MKS1-201ENST00000313863 LRRC7Q96NW7 1537 aa17.32■□□□□ 0.36
MKS1-201ENST00000313863 TMEM131LA2VDJ0 1609 aa17.31■□□□□ 0.36
MKS1-201ENST00000313863 PREX1Q8TCU6 1659 aa17.31■□□□□ 0.36
MKS1-201ENST00000313863 HSP90AB1P08238 724 aaKnown RBP17.31■□□□□ 0.36
MKS1-201ENST00000313863 DDIT3P35638 169 aa17.31■□□□□ 0.36
MKS1-201ENST00000313863 SAFB2Q14151 953 aaKnown RBP eCLIP17.31■□□□□ 0.36
MKS1-201ENST00000313863 ZNF692Q9BU19 519 aaPredicted RBP17.31■□□□□ 0.36
MKS1-201ENST00000313863 FAM135BQ49AJ0 1406 aa17.31■□□□□ 0.36
MKS1-201ENST00000313863 YTHDC2Q9H6S0 1430 aaKnown RBP17.31■□□□□ 0.36
MKS1-201ENST00000313863 PIK3R4Q99570 1358 aa17.3■□□□□ 0.36
MKS1-201ENST00000313863 NUTM2DQ5VT03 806 aaPredicted RBP17.3■□□□□ 0.36
MKS1-201ENST00000313863 IDI1Q13907 227 aa17.3■□□□□ 0.36
MKS1-201ENST00000313863 RRAGDQ9NQL2 400 aaPredicted RBP17.3■□□□□ 0.36
MKS1-201ENST00000313863 STK26Q9P289 416 aa17.3■□□□□ 0.36
MKS1-201ENST00000313863 PTCH1Q13635 1447 aa17.3■□□□□ 0.36
MKS1-201ENST00000313863 LNPKQ9C0E8 428 aa17.29■□□□□ 0.36
MKS1-201ENST00000313863 GZF1Q9H116 711 aaPredicted RBP17.29■□□□□ 0.36
MKS1-201ENST00000313863 RICTORQ6R327 1708 aa17.28■□□□□ 0.36
MKS1-201ENST00000313863 MINK1Q8N4C8 1332 aaPredicted RBP17.28■□□□□ 0.36
MKS1-201ENST00000313863 ATP7BP35670 1465 aa17.27■□□□□ 0.36
MKS1-201ENST00000313863 GNAI1P63096 354 aa17.27■□□□□ 0.36
MKS1-201ENST00000313863 PRAM1Q96QH2 718 aa17.27■□□□□ 0.36
MKS1-201ENST00000313863 MAP2P11137 1827 aaKnown RBP17.27■□□□□ 0.36
MKS1-201ENST00000313863 CLCN1P35523 988 aa17.27■□□□□ 0.35
MKS1-201ENST00000313863 NFE2L2Q16236 605 aa17.27■□□□□ 0.35
MKS1-201ENST00000313863 GRPEL1Q9HAV7 217 aa17.27■□□□□ 0.35
MKS1-201ENST00000313863 ARHGEF40Q8TER5 1519 aa17.26■□□□□ 0.35
MKS1-201ENST00000313863 ZBTB7BO15156 539 aaPredicted RBP17.25■□□□□ 0.35
MKS1-201ENST00000313863 HSP90AA1P07900 732 aaKnown RBP17.25■□□□□ 0.35
MKS1-201ENST00000313863 RAB3GAP1Q15042 981 aa17.25■□□□□ 0.35
MKS1-201ENST00000313863 ANKRD45Q5TZF3 282 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms