RNA–Protein interactions for RNA: ENST00000312849.4

LSMEM1-201, Transcript of leucine rich single-pass membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSMEM1, Length 1,870 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSMEM1-201ENST00000312849 DZIP1LQ8IYY4 767 aaKnown RBP12.32□□□□□ -0.44
LSMEM1-201ENST00000312849 STK26Q9P289 416 aa12.32□□□□□ -0.44
LSMEM1-201ENST00000312849 NLRP1Q9C000 1473 aa12.32□□□□□ -0.44
LSMEM1-201ENST00000312849 AGLP35573 1532 aa12.32□□□□□ -0.44
LSMEM1-201ENST00000312849 FYB1O15117 783 aa12.31□□□□□ -0.44
LSMEM1-201ENST00000312849 RLBP1P12271 317 aa12.31□□□□□ -0.44
LSMEM1-201ENST00000312849 PRAM1Q96QH2 718 aa12.31□□□□□ -0.44
LSMEM1-201ENST00000312849 UPF2Q9HAU5 1272 aaKnown RBP12.31□□□□□ -0.44
LSMEM1-201ENST00000312849 PCDHB15Q9Y5E8 787 aa12.31□□□□□ -0.44
LSMEM1-201ENST00000312849 PNPLA6Q8IY17 1366 aa12.31□□□□□ -0.44
LSMEM1-201ENST00000312849 ARHGEF40Q8TER5 1519 aa12.31□□□□□ -0.44
LSMEM1-201ENST00000312849 FTSJ3Q8IY81 847 aaKnown RBP12.31□□□□□ -0.44
LSMEM1-201ENST00000312849 ATP7BP35670 1465 aa12.3□□□□□ -0.44
LSMEM1-201ENST00000312849 USP19O94966 1318 aa12.3□□□□□ -0.44
LSMEM1-201ENST00000312849 MINK1Q8N4C8 1332 aaPredicted RBP12.3□□□□□ -0.44
LSMEM1-201ENST00000312849 U2SURPO15042 1029 aaKnown RBP12.3□□□□□ -0.44
LSMEM1-201ENST00000312849 DIAPH1O60610 1272 aaKnown RBP12.3□□□□□ -0.44
LSMEM1-201ENST00000312849 SAFB2Q14151 953 aaKnown RBP eCLIP12.3□□□□□ -0.44
LSMEM1-201ENST00000312849 GGNBP2Q9H3C7 697 aa12.3□□□□□ -0.44
LSMEM1-201ENST00000312849 PDZRN3Q9UPQ7 1066 aa12.3□□□□□ -0.44
LSMEM1-201ENST00000312849 TRIM35Q9UPQ4 493 aa12.29□□□□□ -0.44
LSMEM1-201ENST00000312849 IPO8O15397 1037 aaKnown RBP12.29□□□□□ -0.44
LSMEM1-201ENST00000312849 SLC4A3P48751 1232 aa12.29□□□□□ -0.44
LSMEM1-201ENST00000312849 ZNF428Q96B54 188 aa12.29□□□□□ -0.44
LSMEM1-201ENST00000312849 CDK19Q9BWU1 502 aa12.29□□□□□ -0.44
LSMEM1-201ENST00000312849 DDX19BQ9UMR2 479 aa12.29□□□□□ -0.44
LSMEM1-201ENST00000312849 FCHSD2O94868 740 aa12.28□□□□□ -0.44
LSMEM1-201ENST00000312849 EXOSC9Q06265 439 aaKnown RBP12.28□□□□□ -0.44
LSMEM1-201ENST00000312849 HDAC1Q13547 482 aaPredicted RBP12.28□□□□□ -0.44
LSMEM1-201ENST00000312849 BCL2L13Q9BXK5 485 aa12.28□□□□□ -0.44
LSMEM1-201ENST00000312849 SMC4Q9NTJ3 1288 aa12.28□□□□□ -0.44
LSMEM1-201ENST00000312849 SETD1AO15047 1707 aaKnown RBP12.28□□□□□ -0.44
LSMEM1-201ENST00000312849 KIF16BQ96L93 1317 aa12.28□□□□□ -0.44
LSMEM1-201ENST00000312849 GSE1Q14687 1217 aa12.27□□□□□ -0.44
LSMEM1-201ENST00000312849 SPATA31D1Q6ZQQ2 1576 aa12.27□□□□□ -0.45
LSMEM1-201ENST00000312849 RIPK4P57078 832 aa12.27□□□□□ -0.45
LSMEM1-201ENST00000312849 ALDH1L2Q3SY69 923 aa12.27□□□□□ -0.45
LSMEM1-201ENST00000312849 ATF7IPQ6VMQ6 1270 aa12.27□□□□□ -0.45
LSMEM1-201ENST00000312849 STAG3Q9UJ98 1225 aa12.27□□□□□ -0.45
LSMEM1-201ENST00000312849 TNNQ9UQP3 1299 aa12.27□□□□□ -0.45
LSMEM1-201ENST00000312849 MAP2P11137 1827 aaKnown RBP12.26□□□□□ -0.45
LSMEM1-201ENST00000312849 CALD1Q05682 793 aaKnown RBP12.26□□□□□ -0.45
LSMEM1-201ENST00000312849 SSH1Q8WYL5 1049 aa12.25□□□□□ -0.45
LSMEM1-201ENST00000312849 TSR2Q969E8 191 aaKnown RBP12.25□□□□□ -0.45
LSMEM1-201ENST00000312849 TBC1D32Q96NH3 1257 aa12.25□□□□□ -0.45
LSMEM1-201ENST00000312849 CHMP4BQ9H444 224 aaKnown RBP12.25□□□□□ -0.45
LSMEM1-201ENST00000312849 RIMBP3CA6NJZ7 1639 aa12.25□□□□□ -0.45
LSMEM1-201ENST00000312849 RIMBP3BA6NNM3 1639 aa12.25□□□□□ -0.45
LSMEM1-201ENST00000312849 RIMBP3Q9UFD9 1639 aa12.25□□□□□ -0.45
LSMEM1-201ENST00000312849 A2ML1A8K2U0 1454 aa12.25□□□□□ -0.45
LSMEM1-201ENST00000312849 PPIP5K1Q6PFW1 1433 aa12.25□□□□□ -0.45
LSMEM1-201ENST00000312849 TRIM27P14373 513 aa12.25□□□□□ -0.45
LSMEM1-201ENST00000312849 BRPF1P55201 1214 aaPredicted RBP12.25□□□□□ -0.45
LSMEM1-201ENST00000312849 FAM135BQ49AJ0 1406 aa12.24□□□□□ -0.45
LSMEM1-201ENST00000312849 RIMS2Q9UQ26 1411 aa12.24□□□□□ -0.45
LSMEM1-201ENST00000312849 LRRC7Q96NW7 1537 aa12.24□□□□□ -0.45
LSMEM1-201ENST00000312849 CABP1Q9NZU7 370 aa12.24□□□□□ -0.45
LSMEM1-201ENST00000312849 DIP2BQ9P265 1576 aa12.24□□□□□ -0.45
LSMEM1-201ENST00000312849 KNDC1Q76NI1 1749 aa12.23□□□□□ -0.45
LSMEM1-201ENST00000312849 SEC24BO95487 1268 aa12.23□□□□□ -0.45
LSMEM1-201ENST00000312849 FBXO31Q5XUX0 539 aaPredicted RBP12.23□□□□□ -0.45
LSMEM1-201ENST00000312849 EDC4Q6P2E9 1401 aaKnown RBP12.23□□□□□ -0.45
LSMEM1-201ENST00000312849 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.23□□□□□ -0.45
LSMEM1-201ENST00000312849 ITPRIPQ8IWB1 547 aa12.22□□□□□ -0.45
LSMEM1-201ENST00000312849 SMC5Q8IY18 1101 aa12.22□□□□□ -0.45
LSMEM1-201ENST00000312849 NOB1Q9ULX3 412 aaKnown RBP12.22□□□□□ -0.45
LSMEM1-201ENST00000312849 CDK12Q9NYV4 1490 aaPredicted RBP12.21□□□□□ -0.45
LSMEM1-201ENST00000312849 SIRT1Q96EB6 747 aa12.21□□□□□ -0.45
LSMEM1-201ENST00000312849 RSPH6AQ9H0K4 717 aa12.21□□□□□ -0.45
LSMEM1-201ENST00000312849 CPSF1Q10570 1443 aaKnown RBP12.21□□□□□ -0.45
LSMEM1-201ENST00000312849 MON2Q7Z3U7 1717 aa12.21□□□□□ -0.46
LSMEM1-201ENST00000312849 AATKQ6ZMQ8 1374 aa12.21□□□□□ -0.46
LSMEM1-201ENST00000312849 NFE2L2Q16236 605 aa12.21□□□□□ -0.46
LSMEM1-201ENST00000312849 ARHGAP45Q92619 1136 aa12.21□□□□□ -0.46
LSMEM1-201ENST00000312849 ZBTB40Q9NUA8 1239 aa12.21□□□□□ -0.46
LSMEM1-201ENST00000312849 POLKQ9UBT6 870 aa12.21□□□□□ -0.46
LSMEM1-201ENST00000312849 AKAP12Q02952 1782 aa12.2□□□□□ -0.46
LSMEM1-201ENST00000312849 ITSN1Q15811 1721 aa12.2□□□□□ -0.46
LSMEM1-201ENST00000312849 TSPOAP1O95153 1857 aa12.19□□□□□ -0.46
LSMEM1-201ENST00000312849 FRAT2O75474 233 aaPredicted RBP12.19□□□□□ -0.46
LSMEM1-201ENST00000312849 PRKAR2BP31323 418 aa12.19□□□□□ -0.46
LSMEM1-201ENST00000312849 HDGFP51858 240 aaKnown RBP12.19□□□□□ -0.46
LSMEM1-201ENST00000312849 LMOD3Q0VAK6 560 aa12.19□□□□□ -0.46
LSMEM1-201ENST00000312849 TMEM57Q8N5G2 664 aa12.19□□□□□ -0.46
LSMEM1-201ENST00000312849 NRXN3Q9Y4C0 1643 aa12.19□□□□□ -0.46
LSMEM1-201ENST00000312849 GNAI1P63096 354 aa12.19□□□□□ -0.46
LSMEM1-201ENST00000312849 WASLO00401 505 aaPredicted RBP12.18□□□□□ -0.46
LSMEM1-201ENST00000312849 FAM69CQ0P6D2 419 aa12.18□□□□□ -0.46
LSMEM1-201ENST00000312849 IFT57Q9NWB7 429 aa12.18□□□□□ -0.46
LSMEM1-201ENST00000312849 DLG5Q8TDM6 1919 aa12.18□□□□□ -0.46
LSMEM1-201ENST00000312849 PIK3R4Q99570 1358 aa12.18□□□□□ -0.46
LSMEM1-201ENST00000312849 TECPR2O15040 1411 aa12.17□□□□□ -0.46
LSMEM1-201ENST00000312849 PTCH1Q13635 1447 aa12.17□□□□□ -0.46
LSMEM1-201ENST00000312849 NUCB1Q02818 461 aa12.17□□□□□ -0.46
LSMEM1-201ENST00000312849 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.17□□□□□ -0.46
LSMEM1-201ENST00000312849 ANTXR1Q9H6X2 564 aa12.17□□□□□ -0.46
LSMEM1-201ENST00000312849 CPS1P31327 1500 aa12.16□□□□□ -0.46
LSMEM1-201ENST00000312849 IL13P35225 146 aa12.16□□□□□ -0.46
LSMEM1-201ENST00000312849 WAPLQ7Z5K2 1190 aa12.16□□□□□ -0.46
LSMEM1-201ENST00000312849 TBC1D2Q9BYX2 928 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms