RNA–Protein interactions for RNA: ENST00000311604.7

LSP1-201, Transcript of lymphocyte specific protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene LSP1, Length 1,699 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSP1-201ENST00000311604 MTHFSP49914 203 aa23.48■■□□□ 1.35
LSP1-201ENST00000311604 C14orf37Q86TY3 774 aa23.48■■□□□ 1.35
LSP1-201ENST00000311604 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.48■■□□□ 1.35
LSP1-201ENST00000311604 USP6P35125 1406 aa23.47■■□□□ 1.35
LSP1-201ENST00000311604 TMEM94Q12767 1356 aa23.47■■□□□ 1.35
LSP1-201ENST00000311604 NME9Q86XW9 330 aa23.46■■□□□ 1.35
LSP1-201ENST00000311604 ZNF692Q9BU19 519 aaPredicted RBP23.45■■□□□ 1.34
LSP1-201ENST00000311604 ZRANB1Q9UGI0 708 aa23.45■■□□□ 1.34
LSP1-201ENST00000311604 MAP2P11137 1827 aaKnown RBP23.44■■□□□ 1.34
LSP1-201ENST00000311604 LRRC7Q96NW7 1537 aa23.43■■□□□ 1.34
LSP1-201ENST00000311604 WDR43Q15061 677 aaKnown RBP eCLIP23.42■■□□□ 1.34
LSP1-201ENST00000311604 TTC21BQ7Z4L5 1316 aa23.42■■□□□ 1.34
LSP1-201ENST00000311604 C19orf44Q9H6X5 657 aa23.4■■□□□ 1.34
LSP1-201ENST00000311604 PNPLA6Q8IY17 1366 aa23.4■■□□□ 1.34
LSP1-201ENST00000311604 OVOS2A0A0J9YW53 1432 aa23.39■■□□□ 1.34
LSP1-201ENST00000311604 OVOS2Q6IE36 1432 aa23.39■■□□□ 1.34
LSP1-201ENST00000311604 SMG6Q86US8 1419 aaKnown RBP23.39■■□□□ 1.34
LSP1-201ENST00000311604 FBLN1P23142 703 aa23.39■■□□□ 1.34
LSP1-201ENST00000311604 PMFBP1Q8TBY8 1022 aa23.39■■□□□ 1.34
LSP1-201ENST00000311604 LTBP4Q8N2S1 1624 aa23.38■■□□□ 1.33
LSP1-201ENST00000311604 MARF1Q9Y4F3 1742 aaKnown RBP23.38■■□□□ 1.33
LSP1-201ENST00000311604 PIK3C2AO00443 1686 aa23.37■■□□□ 1.33
LSP1-201ENST00000311604 AATKQ6ZMQ8 1374 aa23.36■■□□□ 1.33
LSP1-201ENST00000311604 NCOA3Q9Y6Q9 1424 aa23.35■■□□□ 1.33
LSP1-201ENST00000311604 POLKQ9UBT6 870 aa23.35■■□□□ 1.33
LSP1-201ENST00000311604 CCDC146Q8IYE0 955 aa23.35■■□□□ 1.33
LSP1-201ENST00000311604 XIRP1Q702N8 1843 aaKnown RBP23.35■■□□□ 1.33
LSP1-201ENST00000311604 USP54Q70EL1 1684 aa23.34■■□□□ 1.33
LSP1-201ENST00000311604 ZNF521Q96K83 1311 aa23.34■■□□□ 1.33
LSP1-201ENST00000311604 IQSEC2Q5JU85 1478 aa23.33■■□□□ 1.33
LSP1-201ENST00000311604 SALL2Q9Y467 1007 aaPredicted RBP23.33■■□□□ 1.33
LSP1-201ENST00000311604 ATF3P18847 181 aa23.32■■□□□ 1.32
LSP1-201ENST00000311604 CFAP53Q96M91 514 aa23.32■■□□□ 1.32
LSP1-201ENST00000311604 NUDCQ9Y266 331 aa23.32■■□□□ 1.32
LSP1-201ENST00000311604 MSH6P52701 1360 aa23.32■■□□□ 1.32
LSP1-201ENST00000311604 USP31Q70CQ4 1352 aa23.31■■□□□ 1.32
LSP1-201ENST00000311604 COG3Q96JB2 828 aa23.31■■□□□ 1.32
LSP1-201ENST00000311604 NGDNQ8NEJ9 315 aaKnown RBP23.3■■□□□ 1.32
LSP1-201ENST00000311604 TTC21AQ8NDW8 1320 aa23.3■■□□□ 1.32
LSP1-201ENST00000311604 CDK12Q9NYV4 1490 aaPredicted RBP23.3■■□□□ 1.32
LSP1-201ENST00000311604 PEAK1Q9H792 1746 aa23.29■■□□□ 1.32
LSP1-201ENST00000311604 EMILIN1Q9Y6C2 1016 aa23.29■■□□□ 1.32
LSP1-201ENST00000311604 APAF1O14727 1248 aa23.28■■□□□ 1.32
LSP1-201ENST00000311604 CADPS2Q86UW7 1296 aa23.28■■□□□ 1.32
LSP1-201ENST00000311604 CDCA7LQ96GN5 454 aa23.28■■□□□ 1.32
LSP1-201ENST00000311604 PHF8Q9UPP1 1060 aa23.28■■□□□ 1.32
LSP1-201ENST00000311604 SUPT16HQ9Y5B9 1047 aaKnown RBP23.27■■□□□ 1.32
LSP1-201ENST00000311604 PDE3BQ13370 1112 aa23.26■■□□□ 1.31
LSP1-201ENST00000311604 RRS1Q15050 365 aaKnown RBP23.24■■□□□ 1.31
LSP1-201ENST00000311604 ESCO1Q5FWF5 840 aa23.24■■□□□ 1.31
LSP1-201ENST00000311604 ORAI2Q96SN7 254 aa23.24■■□□□ 1.31
LSP1-201ENST00000311604 C1orf167Q5SNV9 1468 aa23.23■■□□□ 1.31
LSP1-201ENST00000311604 DCCP43146 1447 aa23.23■■□□□ 1.31
LSP1-201ENST00000311604 RUNDC1Q96C34 613 aa23.22■■□□□ 1.31
LSP1-201ENST00000311604 MST1RQ04912 1400 aa23.22■■□□□ 1.31
LSP1-201ENST00000311604 DIAPH1O60610 1272 aaKnown RBP23.22■■□□□ 1.31
LSP1-201ENST00000311604 PLEKHF1Q96S99 279 aa23.22■■□□□ 1.31
LSP1-201ENST00000311604 SLAIN2Q9P270 581 aa23.22■■□□□ 1.31
LSP1-201ENST00000311604 TRPM3Q9HCF6 1732 aaPredicted RBP23.21■■□□□ 1.31
LSP1-201ENST00000311604 U2AF1L5P0DN76 240 aaPredicted RBP23.21■■□□□ 1.31
LSP1-201ENST00000311604 U2AF1Q01081 240 aaKnown RBP eCLIP23.21■■□□□ 1.31
LSP1-201ENST00000311604 CERKQ8TCT0 537 aa23.2■■□□□ 1.3
LSP1-201ENST00000311604 PHF23Q9BUL5 403 aaPredicted RBP23.2■■□□□ 1.3
LSP1-201ENST00000311604 KIF1AQ12756 1690 aa23.2■■□□□ 1.3
LSP1-201ENST00000311604 IL13P35225 146 aa23.19■■□□□ 1.3
LSP1-201ENST00000311604 RNF123Q5XPI4 1314 aa23.19■■□□□ 1.3
LSP1-201ENST00000311604 PPM1GO15355 546 aaPredicted RBP23.18■■□□□ 1.3
LSP1-201ENST00000311604 TCP11L2Q8N4U5 519 aa23.18■■□□□ 1.3
LSP1-201ENST00000311604 RGPD1P0DJD0 1748 aa23.17■■□□□ 1.3
LSP1-201ENST00000311604 U2SURPO15042 1029 aaKnown RBP23.16■■□□□ 1.3
LSP1-201ENST00000311604 FKBP8Q14318 412 aa23.16■■□□□ 1.3
LSP1-201ENST00000311604 SPINK5Q9NQ38 1064 aaPredicted RBP23.16■■□□□ 1.3
LSP1-201ENST00000311604 TRMT2AQ8IZ69 625 aaKnown RBP23.16■■□□□ 1.3
LSP1-201ENST00000311604 NGEFQ8N5V2 710 aa23.16■■□□□ 1.3
LSP1-201ENST00000311604 FOXO3O43524 673 aa23.14■■□□□ 1.29
LSP1-201ENST00000311604 DUSP27Q5VZP5 1158 aa23.14■■□□□ 1.29
LSP1-201ENST00000311604 MAP3K19Q56UN5 1328 aa23.14■■□□□ 1.29
LSP1-201ENST00000311604 SLFN5Q08AF3 891 aa23.13■■□□□ 1.29
LSP1-201ENST00000311604 RSPH6AQ9H0K4 717 aa23.13■■□□□ 1.29
LSP1-201ENST00000311604 RRP7AQ9Y3A4 280 aaKnown RBP23.13■■□□□ 1.29
LSP1-201ENST00000311604 NFAT5O94916 1531 aa23.13■■□□□ 1.29
LSP1-201ENST00000311604 NLRP6P59044 892 aa23.13■■□□□ 1.29
LSP1-201ENST00000311604 NCBP3Q53F19 620 aaKnown RBP23.13■■□□□ 1.29
LSP1-201ENST00000311604 BRINP3Q76B58 766 aa23.13■■□□□ 1.29
LSP1-201ENST00000311604 WWC1Q8IX03 1113 aa23.13■■□□□ 1.29
LSP1-201ENST00000311604 DDX17Q92841 729 aaKnown RBP23.13■■□□□ 1.29
LSP1-201ENST00000311604 GOLGA2Q08379 1002 aa23.12■■□□□ 1.29
LSP1-201ENST00000311604 NUTM2GQ5VZR2 741 aa23.12■■□□□ 1.29
LSP1-201ENST00000311604 ALS2Q96Q42 1657 aa23.11■■□□□ 1.29
LSP1-201ENST00000311604 UBAP1LF5GYI3 381 aa23.1■■□□□ 1.29
LSP1-201ENST00000311604 TOM1O60784 492 aa23.1■■□□□ 1.29
LSP1-201ENST00000311604 ABTB2Q8N961 1025 aa23.1■■□□□ 1.29
LSP1-201ENST00000311604 XPCQ01831 940 aaPredicted RBP23.09■■□□□ 1.29
LSP1-201ENST00000311604 PSME1Q06323 249 aa23.09■■□□□ 1.29
LSP1-201ENST00000311604 EIF4A2Q14240 407 aaKnown RBP23.09■■□□□ 1.29
LSP1-201ENST00000311604 CCDC27Q2M243 656 aa23.09■■□□□ 1.29
LSP1-201ENST00000311604 LTN1O94822 1766 aa23.09■■□□□ 1.29
LSP1-201ENST00000311604 SBNO1A3KN83 1393 aa23.09■■□□□ 1.29
LSP1-201ENST00000311604 SOX12O15370 315 aa23.09■■□□□ 1.29
LSP1-201ENST00000311604 FCHSD2O94868 740 aa23.09■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms