RNA–Protein interactions for RNA: ENST00000310931.8

HDLBP-201, Transcript of high density lipoprotein binding protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDLBP, Length 4,571 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-201ENST00000310931 GBP4Q96PP9 640 aa11.98□□□□□ -0.49
HDLBP-201ENST00000310931 GOLGA6L6A8MZA4 724 aa11.98□□□□□ -0.49
HDLBP-201ENST00000310931 LTKP29376 864 aa11.98□□□□□ -0.49
HDLBP-201ENST00000310931 ASXL1Q8IXJ9 1541 aa11.97□□□□□ -0.49
HDLBP-201ENST00000310931 DRC7Q8IY82 874 aa11.97□□□□□ -0.49
HDLBP-201ENST00000310931 NRXN3Q9Y4C0 1643 aa11.97□□□□□ -0.49
HDLBP-201ENST00000310931 PANK3Q9H999 370 aa11.96□□□□□ -0.49
HDLBP-201ENST00000310931 MYBBP1AQ9BQG0 1328 aaKnown RBP11.96□□□□□ -0.5
HDLBP-201ENST00000310931 SETD1AO15047 1707 aaKnown RBP11.96□□□□□ -0.5
HDLBP-201ENST00000310931 C11orf95C9JLR9 678 aaPredicted RBP11.96□□□□□ -0.5
HDLBP-201ENST00000310931 PRKRIP1Q9H875 184 aaPredicted RBP11.96□□□□□ -0.5
HDLBP-201ENST00000310931 AMOTL2Q9Y2J4 779 aa11.96□□□□□ -0.5
HDLBP-201ENST00000310931 ZNF692Q9BU19 519 aaPredicted RBP11.95□□□□□ -0.5
HDLBP-201ENST00000310931 ZMYND15Q9H091 742 aa11.95□□□□□ -0.5
HDLBP-201ENST00000310931 MINK1Q8N4C8 1332 aaPredicted RBP11.95□□□□□ -0.5
HDLBP-201ENST00000310931 ANKRD36BQ8N2N9 1353 aa11.95□□□□□ -0.5
HDLBP-201ENST00000310931 WASLO00401 505 aaPredicted RBP11.95□□□□□ -0.5
HDLBP-201ENST00000310931 METP08581 1390 aa11.95□□□□□ -0.5
HDLBP-201ENST00000310931 NCOA3Q9Y6Q9 1424 aa11.95□□□□□ -0.5
HDLBP-201ENST00000310931 FAM43AQ8N2R8 423 aa11.94□□□□□ -0.5
HDLBP-201ENST00000310931 ADGRB2O60241 1585 aa11.94□□□□□ -0.5
HDLBP-201ENST00000310931 KCNA6P17658 529 aa11.94□□□□□ -0.5
HDLBP-201ENST00000310931 BRD4O60885 1362 aaPredicted RBP11.94□□□□□ -0.5
HDLBP-201ENST00000310931 ATP7BP35670 1465 aa11.94□□□□□ -0.5
HDLBP-201ENST00000310931 CDK19Q9BWU1 502 aa11.94□□□□□ -0.5
HDLBP-201ENST00000310931 MAP7D2Q96T17 732 aa11.94□□□□□ -0.5
HDLBP-201ENST00000310931 ANKARQ7Z5J8 1434 aa11.93□□□□□ -0.5
HDLBP-201ENST00000310931 NKTRP30414 1462 aaKnown RBP11.93□□□□□ -0.5
HDLBP-201ENST00000310931 NLRP13Q86W25 1043 aa11.93□□□□□ -0.5
HDLBP-201ENST00000310931 SLC4A3P48751 1232 aa11.93□□□□□ -0.5
HDLBP-201ENST00000310931 SLC26A8Q96RN1 970 aa11.92□□□□□ -0.5
HDLBP-201ENST00000310931 RRP9O43818 475 aaKnown RBP11.92□□□□□ -0.5
HDLBP-201ENST00000310931 CFAP53Q96M91 514 aa11.91□□□□□ -0.5
HDLBP-201ENST00000310931 CCDC61Q9Y6R9 512 aa11.91□□□□□ -0.5
HDLBP-201ENST00000310931 USP32Q8NFA0 1604 aa11.91□□□□□ -0.5
HDLBP-201ENST00000310931 SAFB2Q14151 953 aaKnown RBP eCLIP11.91□□□□□ -0.5
HDLBP-201ENST00000310931 CCDC184Q52MB2 194 aa11.91□□□□□ -0.5
HDLBP-201ENST00000310931 TULP4Q9NRJ4 1543 aa11.9□□□□□ -0.5
HDLBP-201ENST00000310931 XRN1Q8IZH2 1706 aaKnown RBP11.9□□□□□ -0.5
HDLBP-201ENST00000310931 C14orf37Q86TY3 774 aa11.9□□□□□ -0.5
HDLBP-201ENST00000310931 INSRP06213 1382 aa11.89□□□□□ -0.51
HDLBP-201ENST00000310931 PARD3Q8TEW0 1356 aa11.89□□□□□ -0.51
HDLBP-201ENST00000310931 CABP2Q9NPB3 220 aa11.88□□□□□ -0.51
HDLBP-201ENST00000310931 NWD1Q149M9 1564 aa11.88□□□□□ -0.51
HDLBP-201ENST00000310931 MORC1Q86VD1 984 aa11.88□□□□□ -0.51
HDLBP-201ENST00000310931 GOLGA6L4A6NEF3 574 aa11.87□□□□□ -0.51
HDLBP-201ENST00000310931 CALD1Q05682 793 aaKnown RBP11.87□□□□□ -0.51
HDLBP-201ENST00000310931 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.87□□□□□ -0.51
HDLBP-201ENST00000310931 MTERF4Q7Z6M4 381 aaKnown RBP11.87□□□□□ -0.51
HDLBP-201ENST00000310931 NUDT16Q96DE0 195 aaKnown RBP11.87□□□□□ -0.51
HDLBP-201ENST00000310931 ROBO2Q9HCK4 1378 aa11.87□□□□□ -0.51
HDLBP-201ENST00000310931 GOLGA6L1Q8N7Z2 621 aa11.87□□□□□ -0.51
HDLBP-201ENST00000310931 MAPK8IP2Q13387 824 aaPredicted RBP11.87□□□□□ -0.51
HDLBP-201ENST00000310931 WAPLQ7Z5K2 1190 aa11.87□□□□□ -0.51
HDLBP-201ENST00000310931 NSD3Q9BZ95 1437 aa11.87□□□□□ -0.51
HDLBP-201ENST00000310931 ITSN1Q15811 1721 aa11.87□□□□□ -0.51
HDLBP-201ENST00000310931 NCKAP5LQ9HCH0 1330 aa11.86□□□□□ -0.51
HDLBP-201ENST00000310931 SETQ01105 290 aaPredicted RBP11.86□□□□□ -0.51
HDLBP-201ENST00000310931 PROSER2Q86WR7 435 aaPredicted RBP11.86□□□□□ -0.51
HDLBP-201ENST00000310931 PER1O15534 1290 aaPredicted RBP11.86□□□□□ -0.51
HDLBP-201ENST00000310931 CASC1Q6TDU7 716 aa11.86□□□□□ -0.51
HDLBP-201ENST00000310931 EDC4Q6P2E9 1401 aaKnown RBP11.86□□□□□ -0.51
HDLBP-201ENST00000310931 PPIP5K1Q6PFW1 1433 aa11.86□□□□□ -0.51
HDLBP-201ENST00000310931 ADGRL3Q9HAR2 1447 aa11.86□□□□□ -0.51
HDLBP-201ENST00000310931 CDC42BPGQ6DT37 1551 aa11.86□□□□□ -0.51
HDLBP-201ENST00000310931 KDM4FA0A1W2PPD8 638 aa11.85□□□□□ -0.51
HDLBP-201ENST00000310931 NGEFQ8N5V2 710 aa11.85□□□□□ -0.51
HDLBP-201ENST00000310931 TTC21AQ8NDW8 1320 aa11.85□□□□□ -0.51
HDLBP-201ENST00000310931 DCCP43146 1447 aa11.85□□□□□ -0.51
HDLBP-201ENST00000310931 MYOM1P52179 1685 aa11.85□□□□□ -0.51
HDLBP-201ENST00000310931 PLEKHG3A1L390 1219 aa11.85□□□□□ -0.51
HDLBP-201ENST00000310931 PTPRUQ92729 1446 aa11.85□□□□□ -0.51
HDLBP-201ENST00000310931 CHD2O14647 1828 aaKnown RBP11.85□□□□□ -0.51
HDLBP-201ENST00000310931 TPM2P07951 284 aa11.84□□□□□ -0.51
HDLBP-201ENST00000310931 FRAT1Q92837 279 aaPredicted RBP11.84□□□□□ -0.51
HDLBP-201ENST00000310931 PDE4AP27815 886 aa11.84□□□□□ -0.51
HDLBP-201ENST00000310931 CC2D1BQ5T0F9 858 aaKnown RBP11.84□□□□□ -0.51
HDLBP-201ENST00000310931 FTSJ3Q8IY81 847 aaKnown RBP11.84□□□□□ -0.51
HDLBP-201ENST00000310931 RBM10P98175 930 aaKnown RBP11.84□□□□□ -0.51
HDLBP-201ENST00000310931 SENP3Q9H4L4 574 aaPredicted RBP11.84□□□□□ -0.51
HDLBP-201ENST00000310931 SLC12A5Q9H2X9 1139 aa11.83□□□□□ -0.52
HDLBP-201ENST00000310931 R3HCC1Q9Y3T6 440 aaKnown RBP11.83□□□□□ -0.52
HDLBP-201ENST00000310931 PLEKHH1Q9ULM0 1364 aa11.83□□□□□ -0.52
HDLBP-201ENST00000310931 ATF3P18847 181 aa11.83□□□□□ -0.52
HDLBP-201ENST00000310931 NUDCQ9Y266 331 aa11.83□□□□□ -0.52
HDLBP-201ENST00000310931 NFKBIBQ15653 356 aa11.83□□□□□ -0.52
HDLBP-201ENST00000310931 NGDNQ8NEJ9 315 aaKnown RBP11.82□□□□□ -0.52
HDLBP-201ENST00000310931 CABP1Q9NZU7 370 aa11.82□□□□□ -0.52
HDLBP-201ENST00000310931 PLEKHG5O94827 1062 aa11.82□□□□□ -0.52
HDLBP-201ENST00000310931 CCDC66A2RUB6 948 aa11.82□□□□□ -0.52
HDLBP-201ENST00000310931 C19orf44Q9H6X5 657 aa11.82□□□□□ -0.52
HDLBP-201ENST00000310931 MSH6P52701 1360 aa11.82□□□□□ -0.52
HDLBP-201ENST00000310931 LMTK3Q96Q04 1460 aa11.81□□□□□ -0.52
HDLBP-201ENST00000310931 COG3Q96JB2 828 aa11.81□□□□□ -0.52
HDLBP-201ENST00000310931 A0A1W2PP64 1363 aa11.81□□□□□ -0.52
HDLBP-201ENST00000310931 CADPS2Q86UW7 1296 aa11.81□□□□□ -0.52
HDLBP-201ENST00000310931 SYAP1Q96A49 352 aaPredicted RBP11.81□□□□□ -0.52
HDLBP-201ENST00000310931 HTATSF1O43719 755 aaKnown RBP11.81□□□□□ -0.52
HDLBP-201ENST00000310931 CSPP1Q1MSJ5 1256 aa11.8□□□□□ -0.52
HDLBP-201ENST00000310931 PSME1Q06323 249 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms