RNA–Protein interactions for RNA: ENST00000310397.12

SNED1-201, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

APPRIS P2 TSL 5 BASIC

Gene SNED1, Length 8,174 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-201ENST00000310397 GNAI2P04899 355 aa15.74■□□□□ 0.11
SNED1-201ENST00000310397 SRCIN1Q9C0H9 1055 aa15.74■□□□□ 0.11
SNED1-201ENST00000310397 NECTIN2Q92692 538 aa15.74■□□□□ 0.11
SNED1-201ENST00000310397 ZNF396Q96N95 335 aaPredicted RBP15.73■□□□□ 0.11
SNED1-201ENST00000310397 XBP1P17861 261 aa15.73■□□□□ 0.11
SNED1-201ENST00000310397 ZSCAN30Q86W11 494 aa15.73■□□□□ 0.11
SNED1-201ENST00000310397 CHD1LQ86WJ1 897 aa15.73■□□□□ 0.11
SNED1-201ENST00000310397 CUL7Q14999 1698 aa15.73■□□□□ 0.11
SNED1-201ENST00000310397 ERC1Q8IUD2 1116 aa15.73■□□□□ 0.11
SNED1-201ENST00000310397 EXOSC9Q06265 439 aaKnown RBP15.72■□□□□ 0.11
SNED1-201ENST00000310397 SYNJ2O15056 1496 aa15.72■□□□□ 0.11
SNED1-201ENST00000310397 POLA1P09884 1462 aaPredicted RBP15.72■□□□□ 0.11
SNED1-201ENST00000310397 VPS53Q5VIR6 699 aa15.72■□□□□ 0.11
SNED1-201ENST00000310397 UQCRHLA0A096LP55 91 aa15.72■□□□□ 0.11
SNED1-201ENST00000310397 UQCRHP07919 91 aa15.72■□□□□ 0.11
SNED1-201ENST00000310397 TAF3Q5VWG9 929 aa15.72■□□□□ 0.11
SNED1-201ENST00000310397 BRMS1Q9HCU9 246 aa15.72■□□□□ 0.11
SNED1-201ENST00000310397 FIBPO43427 364 aa15.72■□□□□ 0.11
SNED1-201ENST00000310397 WWC1Q8IX03 1113 aa15.72■□□□□ 0.11
SNED1-201ENST00000310397 NKTRP30414 1462 aaKnown RBP15.72■□□□□ 0.11
SNED1-201ENST00000310397 NBPF8Q3BBV2 869 aa15.71■□□□□ 0.11
SNED1-201ENST00000310397 LEKR1Q6ZMV7 388 aa15.71■□□□□ 0.11
SNED1-201ENST00000310397 KRT85P78386 507 aa15.71■□□□□ 0.11
SNED1-201ENST00000310397 CCDC27Q2M243 656 aa15.71■□□□□ 0.11
SNED1-201ENST00000310397 CCT4P50991 539 aaKnown RBP15.71■□□□□ 0.11
SNED1-201ENST00000310397 SMARCE1Q969G3 411 aa15.71■□□□□ 0.11
SNED1-201ENST00000310397 NOL10Q9BSC4 688 aaKnown RBP15.71■□□□□ 0.11
SNED1-201ENST00000310397 GGNBP2Q9H3C7 697 aa15.71■□□□□ 0.11
SNED1-201ENST00000310397 NCAPD3P42695 1498 aa15.71■□□□□ 0.11
SNED1-201ENST00000310397 TWISTNBQ3B726 338 aaPredicted RBP15.71■□□□□ 0.11
SNED1-201ENST00000310397 MSH5O43196 834 aa15.71■□□□□ 0.1
SNED1-201ENST00000310397 FBXW7Q969H0 707 aa15.7■□□□□ 0.1
SNED1-201ENST00000310397 PCF11O94913 1555 aaKnown RBP15.7■□□□□ 0.1
SNED1-201ENST00000310397 DCTN1Q14203 1278 aa15.7■□□□□ 0.1
SNED1-201ENST00000310397 CCDC112Q8NEF3 446 aa15.7■□□□□ 0.1
SNED1-201ENST00000310397 G3V3G9 751 aa15.7■□□□□ 0.1
SNED1-201ENST00000310397 DCAF8Q5TAQ9 597 aa15.7■□□□□ 0.1
SNED1-201ENST00000310397 JMYQ8N9B5 988 aa15.7■□□□□ 0.1
SNED1-201ENST00000310397 NAIPQ13075 1403 aa15.7■□□□□ 0.1
SNED1-201ENST00000310397 RBM10P98175 930 aaKnown RBP15.7■□□□□ 0.1
SNED1-201ENST00000310397 PDCL2Q8N4E4 241 aa15.7■□□□□ 0.1
SNED1-201ENST00000310397 SMC2O95347 1197 aa15.69■□□□□ 0.1
SNED1-201ENST00000310397 PDILTQ8N807 584 aa15.69■□□□□ 0.1
SNED1-201ENST00000310397 GAS2L2Q8NHY3 880 aa15.69■□□□□ 0.1
SNED1-201ENST00000310397 DAPK1P53355 1430 aa15.69■□□□□ 0.1
SNED1-201ENST00000310397 SURF6O75683 361 aaKnown RBP15.69■□□□□ 0.1
SNED1-201ENST00000310397 FILIP1LQ4L180 1135 aa15.69■□□□□ 0.1
SNED1-201ENST00000310397 TNMDQ9H2S6 317 aa15.69■□□□□ 0.1
SNED1-201ENST00000310397 CYP46A1Q9Y6A2 500 aa15.69■□□□□ 0.1
SNED1-201ENST00000310397 MYO6Q9UM54 1294 aa15.68■□□□□ 0.1
SNED1-201ENST00000310397 PDE4CQ08493 712 aa15.68■□□□□ 0.1
SNED1-201ENST00000310397 GRIN2BQ13224 1484 aa15.68■□□□□ 0.1
SNED1-201ENST00000310397 SPC24Q8NBT2 197 aa15.68■□□□□ 0.1
SNED1-201ENST00000310397 LRRCC1Q9C099 1032 aa15.68■□□□□ 0.1
SNED1-201ENST00000310397 FSD1Q9BTV5 496 aa15.68■□□□□ 0.1
SNED1-201ENST00000310397 H0YHG0 523 aa15.68■□□□□ 0.1
SNED1-201ENST00000310397 SLFN5Q08AF3 891 aa15.67■□□□□ 0.1
SNED1-201ENST00000310397 RIC3Q7Z5B4 369 aa15.67■□□□□ 0.1
SNED1-201ENST00000310397 PRKAR2BP31323 418 aa15.67■□□□□ 0.1
SNED1-201ENST00000310397 CAGE1Q8TC20 777 aa15.67■□□□□ 0.1
SNED1-201ENST00000310397 PIP4K2AP48426 406 aaPredicted RBP15.67■□□□□ 0.1
SNED1-201ENST00000310397 CABP2Q9NPB3 220 aa15.67■□□□□ 0.1
SNED1-201ENST00000310397 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.67■□□□□ 0.1
SNED1-201ENST00000310397 NAP1L1P55209 391 aaKnown RBP15.67■□□□□ 0.1
SNED1-201ENST00000310397 CCDC184Q52MB2 194 aa15.67■□□□□ 0.1
SNED1-201ENST00000310397 CFAP45Q9UL16 551 aa15.66■□□□□ 0.1
SNED1-201ENST00000310397 SART3Q15020 963 aaKnown RBP15.66■□□□□ 0.1
SNED1-201ENST00000310397 NCBP3Q53F19 620 aaKnown RBP15.66■□□□□ 0.1
SNED1-201ENST00000310397 VPS37DQ86XT2 251 aa15.66■□□□□ 0.1
SNED1-201ENST00000310397 NBPF1Q3BBV0 1214 aa15.66■□□□□ 0.1
SNED1-201ENST00000310397 RDXP35241 583 aaKnown RBP15.66■□□□□ 0.1
SNED1-201ENST00000310397 CALRP27797 417 aaKnown RBP15.65■□□□□ 0.1
SNED1-201ENST00000310397 AQRO60306 1485 aaKnown RBP eCLIP15.65■□□□□ 0.1
SNED1-201ENST00000310397 TROQ12816 1431 aaPredicted RBP15.65■□□□□ 0.1
SNED1-201ENST00000310397 RRP12Q5JTH9 1297 aaKnown RBP15.64■□□□□ 0.1
SNED1-201ENST00000310397 FOSBP53539 338 aa15.64■□□□□ 0.09
SNED1-201ENST00000310397 EIF3JO75822 258 aaKnown RBP15.64■□□□□ 0.09
SNED1-201ENST00000310397 C1orf115Q9H7X2 142 aa15.64■□□□□ 0.09
SNED1-201ENST00000310397 PSME1Q06323 249 aa15.64■□□□□ 0.09
SNED1-201ENST00000310397 NCOA1Q15788 1441 aa15.64■□□□□ 0.09
SNED1-201ENST00000310397 KIF2AO00139 706 aaPredicted RBP15.64■□□□□ 0.09
SNED1-201ENST00000310397 TSR2Q969E8 191 aaKnown RBP15.63■□□□□ 0.09
SNED1-201ENST00000310397 CFAP70Q5T0N1 1121 aa15.63■□□□□ 0.09
SNED1-201ENST00000310397 EPS15P42566 896 aa15.63■□□□□ 0.09
SNED1-201ENST00000310397 CCDC191Q8NCU4 936 aa15.63■□□□□ 0.09
SNED1-201ENST00000310397 NEUROD6Q96NK8 337 aa15.63■□□□□ 0.09
SNED1-201ENST00000310397 WASHC4Q2M389 1173 aa15.63■□□□□ 0.09
SNED1-201ENST00000310397 DACH1Q9UI36 760 aa15.63■□□□□ 0.09
SNED1-201ENST00000310397 TRHP20396 242 aaPredicted RBP15.63■□□□□ 0.09
SNED1-201ENST00000310397 CCDC141Q6ZP82 1450 aa15.63■□□□□ 0.09
SNED1-201ENST00000310397 PLEKHH1Q9ULM0 1364 aa15.62■□□□□ 0.09
SNED1-201ENST00000310397 STK38Q15208 465 aa15.62■□□□□ 0.09
SNED1-201ENST00000310397 TXLNAP40222 546 aa15.62■□□□□ 0.09
SNED1-201ENST00000310397 LARP1BQ659C4 914 aaKnown RBP15.62■□□□□ 0.09
SNED1-201ENST00000310397 PDCL3Q9H2J4 239 aa15.62■□□□□ 0.09
SNED1-201ENST00000310397 OFD1O75665 1012 aa15.62■□□□□ 0.09
SNED1-201ENST00000310397 ZSCAN31Q96LW9 406 aaPredicted RBP15.62■□□□□ 0.09
SNED1-201ENST00000310397 ERLIN1O75477 346 aa15.62■□□□□ 0.09
SNED1-201ENST00000310397 CBFA2T2O43439 604 aa15.62■□□□□ 0.09
SNED1-201ENST00000310397 TCEAL9Q9UHQ7 104 aa15.61■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms