RNA–Protein interactions for RNA: ENST00000307859.4

TRIM40-205, Transcript of tripartite motif containing 40, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRIM40, Length 1,640 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-205ENST00000307859 PIK3R4Q99570 1358 aa15.91■□□□□ 0.14
TRIM40-205ENST00000307859 NKTRP30414 1462 aaKnown RBP15.91■□□□□ 0.14
TRIM40-205ENST00000307859 MORC1Q86VD1 984 aa15.9■□□□□ 0.14
TRIM40-205ENST00000307859 SLC26A8Q96RN1 970 aa15.9■□□□□ 0.14
TRIM40-205ENST00000307859 COL16A1Q07092 1604 aaPredicted RBP15.9■□□□□ 0.14
TRIM40-205ENST00000307859 CPSF1Q10570 1443 aaKnown RBP15.89■□□□□ 0.13
TRIM40-205ENST00000307859 HDGFL2Q7Z4V5 671 aaPredicted RBP15.89■□□□□ 0.13
TRIM40-205ENST00000307859 PPIP5K1Q6PFW1 1433 aa15.89■□□□□ 0.13
TRIM40-205ENST00000307859 CABP1Q9NZU7 370 aa15.88■□□□□ 0.13
TRIM40-205ENST00000307859 NRKQ7Z2Y5 1582 aa15.88■□□□□ 0.13
TRIM40-205ENST00000307859 RGPD8O14715 1765 aaPredicted RBP15.88■□□□□ 0.13
TRIM40-205ENST00000307859 WDR43Q15061 677 aaKnown RBP eCLIP15.87■□□□□ 0.13
TRIM40-205ENST00000307859 SUPT16HQ9Y5B9 1047 aaKnown RBP15.87■□□□□ 0.13
TRIM40-205ENST00000307859 ADAMTS8Q9UP79 889 aa15.86■□□□□ 0.13
TRIM40-205ENST00000307859 NWD1Q149M9 1564 aa15.86■□□□□ 0.13
TRIM40-205ENST00000307859 AMOTL2Q9Y2J4 779 aa15.86■□□□□ 0.13
TRIM40-205ENST00000307859 MAP2P11137 1827 aaKnown RBP15.85■□□□□ 0.13
TRIM40-205ENST00000307859 EDC4Q6P2E9 1401 aaKnown RBP15.85■□□□□ 0.13
TRIM40-205ENST00000307859 NUDT16Q96DE0 195 aaKnown RBP15.85■□□□□ 0.13
TRIM40-205ENST00000307859 FMN2Q9NZ56 1722 aa15.84■□□□□ 0.13
TRIM40-205ENST00000307859 NUDCQ9Y266 331 aa15.84■□□□□ 0.13
TRIM40-205ENST00000307859 CCDC61Q9Y6R9 512 aa15.84■□□□□ 0.13
TRIM40-205ENST00000307859 PRR36Q9H6K5 1346 aa15.84■□□□□ 0.13
TRIM40-205ENST00000307859 FYB1O15117 783 aa15.83■□□□□ 0.13
TRIM40-205ENST00000307859 NALCNQ8IZF0 1738 aa15.83■□□□□ 0.13
TRIM40-205ENST00000307859 NEFLP07196 543 aa15.83■□□□□ 0.12
TRIM40-205ENST00000307859 PDE3BQ13370 1112 aa15.83■□□□□ 0.12
TRIM40-205ENST00000307859 RBM33Q96EV2 1170 aaKnown RBP15.83■□□□□ 0.12
TRIM40-205ENST00000307859 NCOA3Q9Y6Q9 1424 aa15.82■□□□□ 0.12
TRIM40-205ENST00000307859 AHDC1Q5TGY3 1603 aaPredicted RBP15.82■□□□□ 0.12
TRIM40-205ENST00000307859 GGNBP2Q9H3C7 697 aa15.81■□□□□ 0.12
TRIM40-205ENST00000307859 ZRANB1Q9UGI0 708 aa15.81■□□□□ 0.12
TRIM40-205ENST00000307859 COL3A1P02461 1466 aaPredicted RBP15.81■□□□□ 0.12
TRIM40-205ENST00000307859 TNNT2P45379 298 aaPredicted RBP15.8■□□□□ 0.12
TRIM40-205ENST00000307859 FKBP8Q14318 412 aa15.8■□□□□ 0.12
TRIM40-205ENST00000307859 MTHFSP49914 203 aa15.79■□□□□ 0.12
TRIM40-205ENST00000307859 AFF2P51816 1311 aa15.79■□□□□ 0.12
TRIM40-205ENST00000307859 SENP3-EIF4A1A0A087X0R7 540 aa15.79■□□□□ 0.12
TRIM40-205ENST00000307859 RBM6P78332 1123 aaKnown RBP15.79■□□□□ 0.12
TRIM40-205ENST00000307859 CFAP53Q96M91 514 aa15.79■□□□□ 0.12
TRIM40-205ENST00000307859 RGS12O14924 1447 aa15.78■□□□□ 0.12
TRIM40-205ENST00000307859 ANKARQ7Z5J8 1434 aa15.77■□□□□ 0.12
TRIM40-205ENST00000307859 PLEKHG3A1L390 1219 aa15.77■□□□□ 0.12
TRIM40-205ENST00000307859 ZNF692Q9BU19 519 aaPredicted RBP15.77■□□□□ 0.12
TRIM40-205ENST00000307859 ZNF521Q96K83 1311 aa15.76■□□□□ 0.11
TRIM40-205ENST00000307859 RNF123Q5XPI4 1314 aa15.75■□□□□ 0.11
TRIM40-205ENST00000307859 CADPS2Q86UW7 1296 aa15.75■□□□□ 0.11
TRIM40-205ENST00000307859 USP6P35125 1406 aa15.75■□□□□ 0.11
TRIM40-205ENST00000307859 PNPLA6Q8IY17 1366 aa15.74■□□□□ 0.11
TRIM40-205ENST00000307859 NUTM2BA6NNL0 878 aaPredicted RBP15.74■□□□□ 0.11
TRIM40-205ENST00000307859 NUTM2EB1AL46 878 aaPredicted RBP15.74■□□□□ 0.11
TRIM40-205ENST00000307859 NUTM2AQ8IVF1 878 aaPredicted RBP15.74■□□□□ 0.11
TRIM40-205ENST00000307859 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.74■□□□□ 0.11
TRIM40-205ENST00000307859 NGEFQ8N5V2 710 aa15.74■□□□□ 0.11
TRIM40-205ENST00000307859 SALL2Q9Y467 1007 aaPredicted RBP15.74■□□□□ 0.11
TRIM40-205ENST00000307859 USP54Q70EL1 1684 aa15.74■□□□□ 0.11
TRIM40-205ENST00000307859 SSH2Q76I76 1423 aa15.73■□□□□ 0.11
TRIM40-205ENST00000307859 QTRT2Q9H974 415 aaKnown RBP15.73■□□□□ 0.11
TRIM40-205ENST00000307859 CCDC146Q8IYE0 955 aa15.72■□□□□ 0.11
TRIM40-205ENST00000307859 AATKQ6ZMQ8 1374 aa15.72■□□□□ 0.11
TRIM40-205ENST00000307859 ACEP12821 1306 aa15.72■□□□□ 0.11
TRIM40-205ENST00000307859 NME9Q86XW9 330 aa15.72■□□□□ 0.11
TRIM40-205ENST00000307859 NGLY1Q96IV0 654 aa15.72■□□□□ 0.11
TRIM40-205ENST00000307859 ERICH6BQ5W0A0 696 aa15.71■□□□□ 0.11
TRIM40-205ENST00000307859 CDCA7LQ96GN5 454 aa15.71■□□□□ 0.11
TRIM40-205ENST00000307859 C19orf44Q9H6X5 657 aa15.71■□□□□ 0.11
TRIM40-205ENST00000307859 MARF1Q9Y4F3 1742 aaKnown RBP15.7■□□□□ 0.1
TRIM40-205ENST00000307859 OVOS2A0A0J9YW53 1432 aa15.7■□□□□ 0.1
TRIM40-205ENST00000307859 OVOS2Q6IE36 1432 aa15.7■□□□□ 0.1
TRIM40-205ENST00000307859 ADGRL3Q9HAR2 1447 aa15.7■□□□□ 0.1
TRIM40-205ENST00000307859 PIK3C2AO00443 1686 aa15.7■□□□□ 0.1
TRIM40-205ENST00000307859 APAF1O14727 1248 aa15.7■□□□□ 0.1
TRIM40-205ENST00000307859 CCDC125Q86Z20 511 aa15.7■□□□□ 0.1
TRIM40-205ENST00000307859 ATF3P18847 181 aa15.69■□□□□ 0.1
TRIM40-205ENST00000307859 RUNDC1Q96C34 613 aa15.69■□□□□ 0.1
TRIM40-205ENST00000307859 SRCAPQ6ZRS2 3230 aa15.69■□□□□ 0.1
TRIM40-205ENST00000307859 TTC21BQ7Z4L5 1316 aa15.69■□□□□ 0.1
TRIM40-205ENST00000307859 NUTM2FA1L443 756 aa15.68■□□□□ 0.1
TRIM40-205ENST00000307859 BRINP3Q76B58 766 aa15.68■□□□□ 0.1
TRIM40-205ENST00000307859 COG3Q96JB2 828 aa15.68■□□□□ 0.1
TRIM40-205ENST00000307859 POLKQ9UBT6 870 aa15.68■□□□□ 0.1
TRIM40-205ENST00000307859 NCBP3Q53F19 620 aaKnown RBP15.67■□□□□ 0.1
TRIM40-205ENST00000307859 C14orf37Q86TY3 774 aa15.67■□□□□ 0.1
TRIM40-205ENST00000307859 TTC21AQ8NDW8 1320 aa15.67■□□□□ 0.1
TRIM40-205ENST00000307859 GOLGA2Q08379 1002 aa15.66■□□□□ 0.1
TRIM40-205ENST00000307859 LRRC59Q96AG4 307 aaKnown RBP15.65■□□□□ 0.1
TRIM40-205ENST00000307859 PEAK1Q9H792 1746 aa15.65■□□□□ 0.1
TRIM40-205ENST00000307859 USP31Q70CQ4 1352 aa15.65■□□□□ 0.1
TRIM40-205ENST00000307859 DIAPH1O60610 1272 aaKnown RBP15.65■□□□□ 0.1
TRIM40-205ENST00000307859 U2AF1L5P0DN76 240 aaPredicted RBP15.65■□□□□ 0.1
TRIM40-205ENST00000307859 IRX6P78412 446 aaPredicted RBP15.65■□□□□ 0.1
TRIM40-205ENST00000307859 U2AF1Q01081 240 aaKnown RBP eCLIP15.65■□□□□ 0.1
TRIM40-205ENST00000307859 DUSP27Q5VZP5 1158 aa15.65■□□□□ 0.1
TRIM40-205ENST00000307859 TRMT2AQ8IZ69 625 aaKnown RBP15.65■□□□□ 0.1
TRIM40-205ENST00000307859 C8orf37Q96NL8 207 aa15.65■□□□□ 0.1
TRIM40-205ENST00000307859 RCAN3Q9UKA8 241 aa15.65■□□□□ 0.1
TRIM40-205ENST00000307859 SLFN5Q08AF3 891 aa15.64■□□□□ 0.09
TRIM40-205ENST00000307859 TCP11L2Q8N4U5 519 aa15.63■□□□□ 0.09
TRIM40-205ENST00000307859 DCCP43146 1447 aa15.63■□□□□ 0.09
TRIM40-205ENST00000307859 CCDC27Q2M243 656 aa15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms