RNA–Protein interactions for RNA: ENST00000307548.2

SHANK2-AS3-201, SHANK2 antisense RNA 3, humanhuman

TSL 1 (best) BASIC

Gene SHANK2-AS3, Length 1,683 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-AS3-201ENST00000307548 NSD2O96028 1365 aa17.36■□□□□ 0.37
SHANK2-AS3-201ENST00000307548 ESCO1Q5FWF5 840 aa17.36■□□□□ 0.37
SHANK2-AS3-201ENST00000307548 YTHDC1Q96MU7 727 aaKnown RBP17.36■□□□□ 0.37
SHANK2-AS3-201ENST00000307548 CGNL1Q0VF96 1302 aa17.36■□□□□ 0.37
SHANK2-AS3-201ENST00000307548 CENPBP07199 599 aaPredicted RBP17.36■□□□□ 0.37
SHANK2-AS3-201ENST00000307548 IQSEC2Q5JU85 1478 aa17.35■□□□□ 0.37
SHANK2-AS3-201ENST00000307548 SLAIN2Q9P270 581 aa17.35■□□□□ 0.37
SHANK2-AS3-201ENST00000307548 CNGB1Q14028 1251 aaPredicted RBP17.34■□□□□ 0.37
SHANK2-AS3-201ENST00000307548 NGDNQ8NEJ9 315 aaKnown RBP17.34■□□□□ 0.37
SHANK2-AS3-201ENST00000307548 PNISRQ8TF01 805 aaKnown RBP17.33■□□□□ 0.37
SHANK2-AS3-201ENST00000307548 PPP2R1AP30153 589 aa17.32■□□□□ 0.36
SHANK2-AS3-201ENST00000307548 BRINP3Q76B58 766 aa17.32■□□□□ 0.36
SHANK2-AS3-201ENST00000307548 TTC21BQ7Z4L5 1316 aa17.31■□□□□ 0.36
SHANK2-AS3-201ENST00000307548 FYB1O15117 783 aa17.3■□□□□ 0.36
SHANK2-AS3-201ENST00000307548 UBAP1LF5GYI3 381 aa17.29■□□□□ 0.36
SHANK2-AS3-201ENST00000307548 FOXO3O43524 673 aa17.29■□□□□ 0.36
SHANK2-AS3-201ENST00000307548 KIF20BQ96Q89 1820 aa17.29■□□□□ 0.36
SHANK2-AS3-201ENST00000307548 TRPM3Q9HCF6 1732 aaPredicted RBP17.28■□□□□ 0.36
SHANK2-AS3-201ENST00000307548 MORC1Q86VD1 984 aa17.28■□□□□ 0.36
SHANK2-AS3-201ENST00000307548 TTC21AQ8NDW8 1320 aa17.28■□□□□ 0.36
SHANK2-AS3-201ENST00000307548 INSRP06213 1382 aa17.28■□□□□ 0.36
SHANK2-AS3-201ENST00000307548 ANKRD26Q9UPS8 1709 aa17.28■□□□□ 0.36
SHANK2-AS3-201ENST00000307548 PXDNQ92626 1479 aa17.27■□□□□ 0.36
SHANK2-AS3-201ENST00000307548 NME9Q86XW9 330 aa17.27■□□□□ 0.36
SHANK2-AS3-201ENST00000307548 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.27■□□□□ 0.36
SHANK2-AS3-201ENST00000307548 PSME1Q06323 249 aa17.26■□□□□ 0.35
SHANK2-AS3-201ENST00000307548 PIK3C2AO00443 1686 aa17.26■□□□□ 0.35
SHANK2-AS3-201ENST00000307548 NPHP3Q7Z494 1330 aa17.26■□□□□ 0.35
SHANK2-AS3-201ENST00000307548 FAM9BQ8IZU0 186 aa17.26■□□□□ 0.35
SHANK2-AS3-201ENST00000307548 GGNBP2Q9H3C7 697 aa17.26■□□□□ 0.35
SHANK2-AS3-201ENST00000307548 NHSL1Q5SYE7 1610 aa17.25■□□□□ 0.35
SHANK2-AS3-201ENST00000307548 OVOS2A0A0J9YW53 1432 aa17.25■□□□□ 0.35
SHANK2-AS3-201ENST00000307548 OVOS2Q6IE36 1432 aa17.25■□□□□ 0.35
SHANK2-AS3-201ENST00000307548 USP31Q70CQ4 1352 aa17.25■□□□□ 0.35
SHANK2-AS3-201ENST00000307548 KRT28Q7Z3Y7 464 aa17.25■□□□□ 0.35
SHANK2-AS3-201ENST00000307548 DDX17Q92841 729 aaKnown RBP17.25■□□□□ 0.35
SHANK2-AS3-201ENST00000307548 USP54Q70EL1 1684 aa17.24■□□□□ 0.35
SHANK2-AS3-201ENST00000307548 ROBO1Q9Y6N7 1651 aa17.24■□□□□ 0.35
SHANK2-AS3-201ENST00000307548 ZRANB1Q9UGI0 708 aa17.24■□□□□ 0.35
SHANK2-AS3-201ENST00000307548 PIP4K2BP78356 416 aa17.23■□□□□ 0.35
SHANK2-AS3-201ENST00000307548 XPCQ01831 940 aaPredicted RBP17.23■□□□□ 0.35
SHANK2-AS3-201ENST00000307548 SBNO1A3KN83 1393 aa17.23■□□□□ 0.35
SHANK2-AS3-201ENST00000307548 SOS2Q07890 1332 aaPredicted RBP17.23■□□□□ 0.35
SHANK2-AS3-201ENST00000307548 MARF1Q9Y4F3 1742 aaKnown RBP17.23■□□□□ 0.35
SHANK2-AS3-201ENST00000307548 ALS2Q96Q42 1657 aa17.23■□□□□ 0.35
SHANK2-AS3-201ENST00000307548 TOM1O60784 492 aa17.22■□□□□ 0.35
SHANK2-AS3-201ENST00000307548 SCAF1Q9H7N4 1312 aaKnown RBP17.21■□□□□ 0.35
SHANK2-AS3-201ENST00000307548 AHDC1Q5TGY3 1603 aaPredicted RBP17.21■□□□□ 0.35
SHANK2-AS3-201ENST00000307548 PAK3O75914 559 aaPredicted RBP17.19■□□□□ 0.34
SHANK2-AS3-201ENST00000307548 HNRNPUQ00839 825 aaKnown RBP eCLIP17.19■□□□□ 0.34
SHANK2-AS3-201ENST00000307548 SPATA31A3Q5VYP0 1347 aa17.18■□□□□ 0.34
SHANK2-AS3-201ENST00000307548 TNS3Q68CZ2 1445 aa17.18■□□□□ 0.34
SHANK2-AS3-201ENST00000307548 COG3Q96JB2 828 aa17.18■□□□□ 0.34
SHANK2-AS3-201ENST00000307548 ABTB2Q8N961 1025 aa17.17■□□□□ 0.34
SHANK2-AS3-201ENST00000307548 NLRP6P59044 892 aa17.16■□□□□ 0.34
SHANK2-AS3-201ENST00000307548 AATKQ6ZMQ8 1374 aa17.16■□□□□ 0.34
SHANK2-AS3-201ENST00000307548 SLIT3O75094 1523 aa17.16■□□□□ 0.34
SHANK2-AS3-201ENST00000307548 HSPA1LP34931 641 aa17.16■□□□□ 0.34
SHANK2-AS3-201ENST00000307548 MTHFSP49914 203 aa17.16■□□□□ 0.34
SHANK2-AS3-201ENST00000307548 USP19O94966 1318 aa17.15■□□□□ 0.34
SHANK2-AS3-201ENST00000307548 ZBED9Q6R2W3 1325 aa17.15■□□□□ 0.34
SHANK2-AS3-201ENST00000307548 MED1Q15648 1581 aaPredicted RBP17.14■□□□□ 0.33
SHANK2-AS3-201ENST00000307548 TNNT2P45379 298 aaPredicted RBP17.14■□□□□ 0.33
SHANK2-AS3-201ENST00000307548 NUTM2GQ5VZR2 741 aa17.14■□□□□ 0.33
SHANK2-AS3-201ENST00000307548 CFAP53Q96M91 514 aa17.14■□□□□ 0.33
SHANK2-AS3-201ENST00000307548 ARHGEF10O15013 1369 aa17.14■□□□□ 0.33
SHANK2-AS3-201ENST00000307548 SMG6Q86US8 1419 aaKnown RBP17.14■□□□□ 0.33
SHANK2-AS3-201ENST00000307548 CRYBG1Q9Y4K1 1723 aa17.13■□□□□ 0.33
SHANK2-AS3-201ENST00000307548 COL16A1Q07092 1604 aaPredicted RBP17.13■□□□□ 0.33
SHANK2-AS3-201ENST00000307548 BLMP54132 1417 aaPredicted RBP17.13■□□□□ 0.33
SHANK2-AS3-201ENST00000307548 WDR43Q15061 677 aaKnown RBP eCLIP17.13■□□□□ 0.33
SHANK2-AS3-201ENST00000307548 ADAMTS8Q9UP79 889 aa17.13■□□□□ 0.33
SHANK2-AS3-201ENST00000307548 NFAT5O94916 1531 aa17.13■□□□□ 0.33
SHANK2-AS3-201ENST00000307548 FBLN1P23142 703 aa17.12■□□□□ 0.33
SHANK2-AS3-201ENST00000307548 PNPLA6Q8IY17 1366 aa17.12■□□□□ 0.33
SHANK2-AS3-201ENST00000307548 POLKQ9UBT6 870 aa17.11■□□□□ 0.33
SHANK2-AS3-201ENST00000307548 PHLPP1O60346 1717 aa17.11■□□□□ 0.33
SHANK2-AS3-201ENST00000307548 LMOD2Q6P5Q4 547 aa17.1■□□□□ 0.33
SHANK2-AS3-201ENST00000307548 PHRF1Q9P1Y6 1649 aaKnown RBP17.09■□□□□ 0.33
SHANK2-AS3-201ENST00000307548 MAP2P11137 1827 aaKnown RBP17.09■□□□□ 0.33
SHANK2-AS3-201ENST00000307548 COL3A1P02461 1466 aaPredicted RBP17.08■□□□□ 0.32
SHANK2-AS3-201ENST00000307548 KCNA4P22459 653 aa17.08■□□□□ 0.32
SHANK2-AS3-201ENST00000307548 LRRC59Q96AG4 307 aaKnown RBP17.08■□□□□ 0.32
SHANK2-AS3-201ENST00000307548 PEAK1Q9H792 1746 aa17.08■□□□□ 0.32
SHANK2-AS3-201ENST00000307548 COL22A1Q8NFW1 1626 aaPredicted RBP17.08■□□□□ 0.32
SHANK2-AS3-201ENST00000307548 GCP02774 474 aa17.07■□□□□ 0.32
SHANK2-AS3-201ENST00000307548 KCNH5Q8NCM2 988 aa17.07■□□□□ 0.32
SHANK2-AS3-201ENST00000307548 EMILIN1Q9Y6C2 1016 aa17.07■□□□□ 0.32
SHANK2-AS3-201ENST00000307548 CDK12Q9NYV4 1490 aaPredicted RBP17.07■□□□□ 0.32
SHANK2-AS3-201ENST00000307548 MAP3K19Q56UN5 1328 aa17.07■□□□□ 0.32
SHANK2-AS3-201ENST00000307548 RRS1Q15050 365 aaKnown RBP17.07■□□□□ 0.32
SHANK2-AS3-201ENST00000307548 ABCA3Q99758 1704 aa17.06■□□□□ 0.32
SHANK2-AS3-201ENST00000307548 SHPRHQ149N8 1683 aa17.06■□□□□ 0.32
SHANK2-AS3-201ENST00000307548 SOX12O15370 315 aa17.05■□□□□ 0.32
SHANK2-AS3-201ENST00000307548 NGEFQ8N5V2 710 aa17.05■□□□□ 0.32
SHANK2-AS3-201ENST00000307548 CABLES1Q8TDN4 633 aa17.05■□□□□ 0.32
SHANK2-AS3-201ENST00000307548 KIF24Q5T7B8 1368 aa17.05■□□□□ 0.32
SHANK2-AS3-201ENST00000307548 NUDCQ9Y266 331 aa17.04■□□□□ 0.32
SHANK2-AS3-201ENST00000307548 ARHGEF25Q86VW2 580 aa17.04■□□□□ 0.32
SHANK2-AS3-201ENST00000307548 LTN1O94822 1766 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms