RNA–Protein interactions for RNA: ENST00000303927.3

CAVIN3-201, Transcript of caveolae associated protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAVIN3, Length 1,174 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAVIN3-201ENST00000303927 ITSN1Q15811 1721 aa28.57■■■□□ 2.16
CAVIN3-201ENST00000303927 CCDC125Q86Z20 511 aa28.56■■■□□ 2.16
CAVIN3-201ENST00000303927 NRAPQ86VF7 1730 aa28.55■■■□□ 2.16
CAVIN3-201ENST00000303927 CCDC9Q9Y3X0 531 aaKnown RBP28.54■■■□□ 2.16
CAVIN3-201ENST00000303927 FAM83GA6ND36 823 aa28.53■■■□□ 2.16
CAVIN3-201ENST00000303927 CCER1Q8TC90 406 aaPredicted RBP28.53■■■□□ 2.16
CAVIN3-201ENST00000303927 TIMELESSQ9UNS1 1208 aa28.53■■■□□ 2.16
CAVIN3-201ENST00000303927 ATP7BP35670 1465 aa28.53■■■□□ 2.16
CAVIN3-201ENST00000303927 CRYBG1Q9Y4K1 1723 aa28.52■■■□□ 2.16
CAVIN3-201ENST00000303927 QRICH2Q9H0J4 1663 aa28.52■■■□□ 2.16
CAVIN3-201ENST00000303927 CENPJQ9HC77 1338 aaPredicted RBP28.52■■■□□ 2.16
CAVIN3-201ENST00000303927 SEPT12Q8IYM1 358 aa28.52■■■□□ 2.16
CAVIN3-201ENST00000303927 NGDNQ8NEJ9 315 aaKnown RBP28.52■■■□□ 2.16
CAVIN3-201ENST00000303927 COL14A1Q05707 1796 aaKnown RBP28.52■■■□□ 2.16
CAVIN3-201ENST00000303927 BLMP54132 1417 aaPredicted RBP28.5■■■□□ 2.15
CAVIN3-201ENST00000303927 PAK3O75914 559 aaPredicted RBP28.47■■■□□ 2.15
CAVIN3-201ENST00000303927 TOPAZ1Q8N9V7 1692 aa28.47■■■□□ 2.15
CAVIN3-201ENST00000303927 SRCAPQ6ZRS2 3230 aa28.47■■■□□ 2.15
CAVIN3-201ENST00000303927 ONECUT3O60422 494 aaPredicted RBP28.46■■■□□ 2.15
CAVIN3-201ENST00000303927 NUDT16Q96DE0 195 aaKnown RBP28.46■■■□□ 2.15
CAVIN3-201ENST00000303927 CARD11Q9BXL7 1154 aa28.46■■■□□ 2.15
CAVIN3-201ENST00000303927 BTG4Q9NY30 223 aa28.46■■■□□ 2.15
CAVIN3-201ENST00000303927 ZRANB1Q9UGI0 708 aa28.46■■■□□ 2.15
CAVIN3-201ENST00000303927 CDK19Q9BWU1 502 aa28.42■■■□□ 2.14
CAVIN3-201ENST00000303927 PHRF1Q9P1Y6 1649 aaKnown RBP28.42■■■□□ 2.14
CAVIN3-201ENST00000303927 KRT27Q7Z3Y8 459 aa28.41■■■□□ 2.14
CAVIN3-201ENST00000303927 A0A0G2JS52 829 aa28.4■■■□□ 2.14
CAVIN3-201ENST00000303927 MYT1Q01538 1121 aa28.4■■■□□ 2.14
CAVIN3-201ENST00000303927 FAM98CQ17RN3 349 aaKnown RBP28.39■■■□□ 2.14
CAVIN3-201ENST00000303927 POLR3AO14802 1390 aaPredicted RBP28.37■■■□□ 2.13
CAVIN3-201ENST00000303927 SF3B2Q13435 895 aaKnown RBP28.37■■■□□ 2.13
CAVIN3-201ENST00000303927 PRDM11Q9NQV5 511 aa28.37■■■□□ 2.13
CAVIN3-201ENST00000303927 DEFB132Q7Z7B7 95 aa28.35■■■□□ 2.13
CAVIN3-201ENST00000303927 SBNO2Q9Y2G9 1366 aa28.35■■■□□ 2.13
CAVIN3-201ENST00000303927 SRPK2P78362 688 aaKnown RBP28.34■■■□□ 2.13
CAVIN3-201ENST00000303927 CCDC61Q9Y6R9 512 aa28.34■■■□□ 2.13
CAVIN3-201ENST00000303927 ACEP12821 1306 aa28.34■■■□□ 2.13
CAVIN3-201ENST00000303927 SPATA31A5Q5VU36 1347 aa28.34■■■□□ 2.13
CAVIN3-201ENST00000303927 EVC2Q86UK5 1308 aa28.34■■■□□ 2.13
CAVIN3-201ENST00000303927 SPATA31A7Q8IWB4 1347 aa28.34■■■□□ 2.13
CAVIN3-201ENST00000303927 KIAA0232Q92628 1395 aa28.34■■■□□ 2.13
CAVIN3-201ENST00000303927 THSD7AQ9UPZ6 1657 aa28.32■■■□□ 2.12
CAVIN3-201ENST00000303927 NRKQ7Z2Y5 1582 aa28.3■■■□□ 2.12
CAVIN3-201ENST00000303927 PLEKHG3A1L390 1219 aa28.3■■■□□ 2.12
CAVIN3-201ENST00000303927 NUTM2GQ5VZR2 741 aa28.3■■■□□ 2.12
CAVIN3-201ENST00000303927 CHRNA2Q15822 529 aa28.29■■■□□ 2.12
CAVIN3-201ENST00000303927 CABP2Q9NPB3 220 aa28.28■■■□□ 2.12
CAVIN3-201ENST00000303927 PPIP5K1Q6PFW1 1433 aa28.27■■■□□ 2.12
CAVIN3-201ENST00000303927 ZC3H6P61129 1189 aaKnown RBP28.27■■■□□ 2.12
CAVIN3-201ENST00000303927 RGPD1P0DJD0 1748 aa28.26■■■□□ 2.12
CAVIN3-201ENST00000303927 SPATA31A1Q5TZJ5 1347 aa28.24■■■□□ 2.11
CAVIN3-201ENST00000303927 STRN4Q9NRL3 753 aa28.24■■■□□ 2.11
CAVIN3-201ENST00000303927 ABTB2Q8N961 1025 aa28.23■■■□□ 2.11
CAVIN3-201ENST00000303927 SLC24A1O60721 1099 aa28.22■■■□□ 2.11
CAVIN3-201ENST00000303927 BAG6P46379 1132 aa28.22■■■□□ 2.11
CAVIN3-201ENST00000303927 FAM182BQ5T319 152 aa28.22■■■□□ 2.11
CAVIN3-201ENST00000303927 USP47Q96K76 1375 aa28.21■■■□□ 2.11
CAVIN3-201ENST00000303927 USP19O94966 1318 aa28.2■■■□□ 2.11
CAVIN3-201ENST00000303927 LMO7Q8WWI1 1683 aa28.2■■■□□ 2.11
CAVIN3-201ENST00000303927 SSH2Q76I76 1423 aa28.2■■■□□ 2.11
CAVIN3-201ENST00000303927 TNS1Q9HBL0 1735 aaKnown RBP28.19■■■□□ 2.1
CAVIN3-201ENST00000303927 ST20-MTHFSA0A0A6YYL1 179 aa28.19■■■□□ 2.1
CAVIN3-201ENST00000303927 CPDO75976 1380 aa28.18■■■□□ 2.1
CAVIN3-201ENST00000303927 CAMTA1Q9Y6Y1 1673 aa28.18■■■□□ 2.1
CAVIN3-201ENST00000303927 CABP1Q9NZU7 370 aa28.16■■■□□ 2.1
CAVIN3-201ENST00000303927 BRD4O60885 1362 aaPredicted RBP28.15■■■□□ 2.1
CAVIN3-201ENST00000303927 EVA1CP58658 441 aa28.15■■■□□ 2.1
CAVIN3-201ENST00000303927 TESK2Q96S53 571 aa28.15■■■□□ 2.1
CAVIN3-201ENST00000303927 USP35Q9P2H5 1018 aa28.15■■■□□ 2.1
CAVIN3-201ENST00000303927 NLRP13Q86W25 1043 aa28.14■■■□□ 2.1
CAVIN3-201ENST00000303927 PUS7Q96PZ0 661 aaKnown RBP28.14■■■□□ 2.1
CAVIN3-201ENST00000303927 USP6P35125 1406 aa28.14■■■□□ 2.1
CAVIN3-201ENST00000303927 DISP2A7MBM2 1401 aa28.12■■■□□ 2.09
CAVIN3-201ENST00000303927 LRP5O75197 1615 aa28.12■■■□□ 2.09
CAVIN3-201ENST00000303927 GCP02774 474 aa28.12■■■□□ 2.09
CAVIN3-201ENST00000303927 EN1Q05925 392 aaPredicted RBP28.12■■■□□ 2.09
CAVIN3-201ENST00000303927 AKAP12Q02952 1782 aa28.11■■■□□ 2.09
CAVIN3-201ENST00000303927 LARP1Q6PKG0 1096 aaKnown RBP28.11■■■□□ 2.09
CAVIN3-201ENST00000303927 BARGINQ6ZT62 677 aa28.1■■■□□ 2.09
CAVIN3-201ENST00000303927 PIK3C2AO00443 1686 aa28.09■■■□□ 2.09
CAVIN3-201ENST00000303927 COL5A2P05997 1499 aaPredicted RBP28.08■■■□□ 2.09
CAVIN3-201ENST00000303927 SLIT3O75094 1523 aa28.08■■■□□ 2.09
CAVIN3-201ENST00000303927 PSDA5PKW4 1024 aaPredicted RBP28.08■■■□□ 2.09
CAVIN3-201ENST00000303927 FAM196AQ6ZSG2 479 aa28.08■■■□□ 2.09
CAVIN3-201ENST00000303927 ZNF692Q9BU19 519 aaPredicted RBP28.07■■■□□ 2.08
CAVIN3-201ENST00000303927 TMF1P82094 1093 aa28.06■■■□□ 2.08
CAVIN3-201ENST00000303927 TCP11L2Q8N4U5 519 aa28.06■■■□□ 2.08
CAVIN3-201ENST00000303927 TRIM37O94972 964 aa28.05■■■□□ 2.08
CAVIN3-201ENST00000303927 NLRP6P59044 892 aa28.05■■■□□ 2.08
CAVIN3-201ENST00000303927 PDE3BQ13370 1112 aa28.04■■■□□ 2.08
CAVIN3-201ENST00000303927 PARP4Q9UKK3 1724 aaKnown RBP28.04■■■□□ 2.08
CAVIN3-201ENST00000303927 CPSF1Q10570 1443 aaKnown RBP28.03■■■□□ 2.08
CAVIN3-201ENST00000303927 NINLQ9Y2I6 1382 aa28.03■■■□□ 2.08
CAVIN3-201ENST00000303927 ZBTB7CA1YPR0 619 aa28.03■■■□□ 2.08
CAVIN3-201ENST00000303927 THRAP3Q9Y2W1 955 aaKnown RBP28.03■■■□□ 2.08
CAVIN3-201ENST00000303927 MON2Q7Z3U7 1717 aa28.03■■■□□ 2.08
CAVIN3-201ENST00000303927 EZH2Q15910 746 aaKnown RBP28.02■■■□□ 2.08
CAVIN3-201ENST00000303927 CRB1P82279 1406 aa28.01■■■□□ 2.08
CAVIN3-201ENST00000303927 CDCA8Q53HL2 280 aa28.01■■■□□ 2.07
CAVIN3-201ENST00000303927 TMC1Q8TDI8 760 aa28.01■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms