RNA–Protein interactions for RNA: ENST00000302536.2

VAT1L-201, Transcript of vesicle amine transport 1 like, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAT1L, Length 3,825 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1L-201ENST00000302536 RIPK4P57078 832 aa16.31■□□□□ 0.2
VAT1L-201ENST00000302536 CAMSAP1Q5T5Y3 1602 aa16.31■□□□□ 0.2
VAT1L-201ENST00000302536 E9PSI1 815 aa16.31■□□□□ 0.2
VAT1L-201ENST00000302536 LTV1Q96GA3 475 aaPredicted RBP16.3■□□□□ 0.2
VAT1L-201ENST00000302536 NGDNQ8NEJ9 315 aaKnown RBP16.3■□□□□ 0.2
VAT1L-201ENST00000302536 PRKAR2BP31323 418 aa16.29■□□□□ 0.2
VAT1L-201ENST00000302536 SIGLEC1Q9BZZ2 1709 aa16.29■□□□□ 0.2
VAT1L-201ENST00000302536 KDM5AP29375 1690 aaKnown RBP16.29■□□□□ 0.2
VAT1L-201ENST00000302536 IQGAP1P46940 1657 aa16.29■□□□□ 0.2
VAT1L-201ENST00000302536 LMTK2Q8IWU2 1503 aa16.29■□□□□ 0.2
VAT1L-201ENST00000302536 TNRQ92752 1358 aa16.29■□□□□ 0.2
VAT1L-201ENST00000302536 WASLO00401 505 aaPredicted RBP16.29■□□□□ 0.2
VAT1L-201ENST00000302536 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.29■□□□□ 0.2
VAT1L-201ENST00000302536 DIP2BQ9P265 1576 aa16.28■□□□□ 0.2
VAT1L-201ENST00000302536 ANKRD36BQ8N2N9 1353 aa16.28■□□□□ 0.2
VAT1L-201ENST00000302536 COG3Q96JB2 828 aa16.28■□□□□ 0.2
VAT1L-201ENST00000302536 RRAGDQ9NQL2 400 aaPredicted RBP16.28■□□□□ 0.2
VAT1L-201ENST00000302536 DCTN1Q14203 1278 aa16.26■□□□□ 0.19
VAT1L-201ENST00000302536 AMOTL2Q9Y2J4 779 aa16.26■□□□□ 0.19
VAT1L-201ENST00000302536 BLMP54132 1417 aaPredicted RBP16.26■□□□□ 0.19
VAT1L-201ENST00000302536 FTSJ3Q8IY81 847 aaKnown RBP16.26■□□□□ 0.19
VAT1L-201ENST00000302536 EXOSC9Q06265 439 aaKnown RBP16.25■□□□□ 0.19
VAT1L-201ENST00000302536 SMC4Q9NTJ3 1288 aa16.25■□□□□ 0.19
VAT1L-201ENST00000302536 ATAD2Q6PL18 1390 aa16.25■□□□□ 0.19
VAT1L-201ENST00000302536 RICTORQ6R327 1708 aa16.25■□□□□ 0.19
VAT1L-201ENST00000302536 GLI2P10070 1586 aa16.24■□□□□ 0.19
VAT1L-201ENST00000302536 CCDC61Q9Y6R9 512 aa16.24■□□□□ 0.19
VAT1L-201ENST00000302536 XPCQ01831 940 aaPredicted RBP16.24■□□□□ 0.19
VAT1L-201ENST00000302536 RNF123Q5XPI4 1314 aa16.24■□□□□ 0.19
VAT1L-201ENST00000302536 NEXMIFQ5QGS0 1516 aa16.24■□□□□ 0.19
VAT1L-201ENST00000302536 PIK3C2BO00750 1634 aa16.23■□□□□ 0.19
VAT1L-201ENST00000302536 ADGRB1O14514 1584 aa16.23■□□□□ 0.19
VAT1L-201ENST00000302536 GOLGA6L3A6NEY3 463 aa16.23■□□□□ 0.19
VAT1L-201ENST00000302536 MFAP1P55081 439 aaKnown RBP16.23■□□□□ 0.19
VAT1L-201ENST00000302536 LAMC1P11047 1609 aa16.23■□□□□ 0.19
VAT1L-201ENST00000302536 TMPOP42166 694 aaKnown RBP16.22■□□□□ 0.19
VAT1L-201ENST00000302536 ARHGAP31Q2M1Z3 1444 aa16.22■□□□□ 0.19
VAT1L-201ENST00000302536 POLKQ9UBT6 870 aa16.22■□□□□ 0.19
VAT1L-201ENST00000302536 SBNO2Q9Y2G9 1366 aa16.21■□□□□ 0.19
VAT1L-201ENST00000302536 TULP4Q9NRJ4 1543 aa16.21■□□□□ 0.19
VAT1L-201ENST00000302536 FAM83GA6ND36 823 aa16.21■□□□□ 0.19
VAT1L-201ENST00000302536 CLTCQ00610 1675 aaKnown RBP16.21■□□□□ 0.19
VAT1L-201ENST00000302536 PHACTR3Q96KR7 559 aa16.21■□□□□ 0.19
VAT1L-201ENST00000302536 MS4A1P11836 297 aa16.21■□□□□ 0.18
VAT1L-201ENST00000302536 DNTTIP2Q5QJE6 756 aaKnown RBP16.21■□□□□ 0.18
VAT1L-201ENST00000302536 A2ML1A8K2U0 1454 aa16.2■□□□□ 0.18
VAT1L-201ENST00000302536 MYO5BQ9ULV0 1848 aa16.2■□□□□ 0.18
VAT1L-201ENST00000302536 QRICH2Q9H0J4 1663 aa16.2■□□□□ 0.18
VAT1L-201ENST00000302536 NRXN1Q9ULB1 1477 aa16.2■□□□□ 0.18
VAT1L-201ENST00000302536 L1TD1Q5T7N2 865 aaKnown RBP16.2■□□□□ 0.18
VAT1L-201ENST00000302536 ITPRIPQ8IWB1 547 aa16.2■□□□□ 0.18
VAT1L-201ENST00000302536 MYH16Q9H6N6 1097 aa16.2■□□□□ 0.18
VAT1L-201ENST00000302536 FAM161AQ3B820 660 aa16.19■□□□□ 0.18
VAT1L-201ENST00000302536 POLR3AO14802 1390 aaPredicted RBP16.19■□□□□ 0.18
VAT1L-201ENST00000302536 PPIP5K1Q6PFW1 1433 aa16.19■□□□□ 0.18
VAT1L-201ENST00000302536 PLCB2Q00722 1185 aa16.19■□□□□ 0.18
VAT1L-201ENST00000302536 AEBP1Q8IUX7 1158 aa16.19■□□□□ 0.18
VAT1L-201ENST00000302536 PPP6R1Q9UPN7 881 aa16.18■□□□□ 0.18
VAT1L-201ENST00000302536 ACEP12821 1306 aa16.18■□□□□ 0.18
VAT1L-201ENST00000302536 NPC1L1Q9UHC9 1359 aa16.18■□□□□ 0.18
VAT1L-201ENST00000302536 ZNF521Q96K83 1311 aa16.18■□□□□ 0.18
VAT1L-201ENST00000302536 ZMYM4Q5VZL5 1548 aa16.18■□□□□ 0.18
VAT1L-201ENST00000302536 RLBP1P12271 317 aa16.18■□□□□ 0.18
VAT1L-201ENST00000302536 PPLO60437 1756 aa16.17■□□□□ 0.18
VAT1L-201ENST00000302536 SULT6B1Q6IMI4 303 aa16.17■□□□□ 0.18
VAT1L-201ENST00000302536 PRR36Q9H6K5 1346 aa16.17■□□□□ 0.18
VAT1L-201ENST00000302536 RARSP54136 660 aaKnown RBP16.16■□□□□ 0.18
VAT1L-201ENST00000302536 KCNA6P17658 529 aa16.16■□□□□ 0.18
VAT1L-201ENST00000302536 AMPHP49418 695 aa16.16■□□□□ 0.18
VAT1L-201ENST00000302536 NLRP6P59044 892 aa16.16■□□□□ 0.18
VAT1L-201ENST00000302536 THEMISQ8N1K5 641 aaPredicted RBP16.16■□□□□ 0.18
VAT1L-201ENST00000302536 MIS18AQ9NYP9 233 aa16.16■□□□□ 0.18
VAT1L-201ENST00000302536 ROBO2Q9HCK4 1378 aa16.16■□□□□ 0.18
VAT1L-201ENST00000302536 HSP90AB2PQ58FF8 381 aa16.16■□□□□ 0.18
VAT1L-201ENST00000302536 PANK2Q9BZ23 570 aa16.16■□□□□ 0.18
VAT1L-201ENST00000302536 ALKQ9UM73 1620 aa16.16■□□□□ 0.18
VAT1L-201ENST00000302536 PREX1Q8TCU6 1659 aa16.15■□□□□ 0.18
VAT1L-201ENST00000302536 MYOM1P52179 1685 aa16.15■□□□□ 0.18
VAT1L-201ENST00000302536 TMEM2Q9UHN6 1383 aa16.15■□□□□ 0.18
VAT1L-201ENST00000302536 HSP90AB1P08238 724 aaKnown RBP16.15■□□□□ 0.18
VAT1L-201ENST00000302536 RBM10P98175 930 aaKnown RBP16.15■□□□□ 0.18
VAT1L-201ENST00000302536 NECTIN2Q92692 538 aa16.15■□□□□ 0.18
VAT1L-201ENST00000302536 IGHDP01880 384 aa16.14■□□□□ 0.17
VAT1L-201ENST00000302536 NKTRP30414 1462 aaKnown RBP16.14■□□□□ 0.17
VAT1L-201ENST00000302536 PTMAP06454 111 aaKnown RBP16.14■□□□□ 0.17
VAT1L-201ENST00000302536 PTPRMP28827 1452 aa16.14■□□□□ 0.17
VAT1L-201ENST00000302536 ABCC11Q96J66 1382 aa16.13■□□□□ 0.17
VAT1L-201ENST00000302536 FAM13BQ9NYF5 915 aa16.13■□□□□ 0.17
VAT1L-201ENST00000302536 FOXD4L5Q5VV16 416 aaPredicted RBP16.13■□□□□ 0.17
VAT1L-201ENST00000302536 FOXD4L4Q8WXT5 416 aaPredicted RBP16.13■□□□□ 0.17
VAT1L-201ENST00000302536 SSH1Q8WYL5 1049 aa16.12■□□□□ 0.17
VAT1L-201ENST00000302536 MCM10Q7L590 875 aa16.12■□□□□ 0.17
VAT1L-201ENST00000302536 TRIM35Q9UPQ4 493 aa16.12■□□□□ 0.17
VAT1L-201ENST00000302536 TMEM131LA2VDJ0 1609 aa16.11■□□□□ 0.17
VAT1L-201ENST00000302536 KRT24Q2M2I5 525 aa16.11■□□□□ 0.17
VAT1L-201ENST00000302536 C1orf115Q9H7X2 142 aa16.11■□□□□ 0.17
VAT1L-201ENST00000302536 NOB1Q9ULX3 412 aaKnown RBP16.11■□□□□ 0.17
VAT1L-201ENST00000302536 USHBP1Q8N6Y0 703 aa16.11■□□□□ 0.17
VAT1L-201ENST00000302536 APBB1O00213 710 aa16.11■□□□□ 0.17
VAT1L-201ENST00000302536 ABTB2Q8N961 1025 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 6 ms