RNA–Protein interactions for RNA: ENST00000301480.4

ZNF560-201, Transcript of zinc finger protein 560, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZNF560, Length 2,654 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF560-201ENST00000301480 CADPS2Q86UW7 1296 aa6.18□□□□□ -1.42
ZNF560-201ENST00000301480 PCGF6Q9BYE7 350 aa6.18□□□□□ -1.42
ZNF560-201ENST00000301480 TRPM2O94759 1503 aa6.18□□□□□ -1.42
ZNF560-201ENST00000301480 PRAG1Q86YV5 1406 aa6.18□□□□□ -1.42
ZNF560-201ENST00000301480 PITPNM1O00562 1244 aa6.17□□□□□ -1.42
ZNF560-201ENST00000301480 JCADQ9P266 1359 aa6.17□□□□□ -1.42
ZNF560-201ENST00000301480 SPATA31A6Q5VVP1 1343 aa6.17□□□□□ -1.42
ZNF560-201ENST00000301480 PPP1R15AO75807 674 aaPredicted RBP6.17□□□□□ -1.42
ZNF560-201ENST00000301480 ZNF830Q96NB3 372 aaPredicted RBP6.16□□□□□ -1.42
ZNF560-201ENST00000301480 C19orf44Q9H6X5 657 aa6.16□□□□□ -1.42
ZNF560-201ENST00000301480 CHIC2Q9UKJ5 165 aa6.16□□□□□ -1.42
ZNF560-201ENST00000301480 PRDM4Q9UKN5 801 aa6.16□□□□□ -1.42
ZNF560-201ENST00000301480 RPGRIP1LQ68CZ1 1315 aa6.16□□□□□ -1.42
ZNF560-201ENST00000301480 SGSM3Q96HU1 749 aa6.16□□□□□ -1.42
ZNF560-201ENST00000301480 SETBP1Q9Y6X0 1596 aa6.16□□□□□ -1.42
ZNF560-201ENST00000301480 CHD2O14647 1828 aaKnown RBP6.16□□□□□ -1.42
ZNF560-201ENST00000301480 RRBP1Q9P2E9 1410 aaKnown RBP6.15□□□□□ -1.42
ZNF560-201ENST00000301480 XIRP1Q702N8 1843 aaKnown RBP6.15□□□□□ -1.42
ZNF560-201ENST00000301480 TMTC2Q8N394 836 aa6.15□□□□□ -1.42
ZNF560-201ENST00000301480 SLAIN2Q9P270 581 aa6.15□□□□□ -1.42
ZNF560-201ENST00000301480 NUP155O75694 1391 aa6.15□□□□□ -1.42
ZNF560-201ENST00000301480 AHDC1Q5TGY3 1603 aaPredicted RBP6.15□□□□□ -1.42
ZNF560-201ENST00000301480 ADAMTS13Q76LX8 1427 aa6.15□□□□□ -1.42
ZNF560-201ENST00000301480 CDCA8Q53HL2 280 aa6.15□□□□□ -1.43
ZNF560-201ENST00000301480 LAS1LQ9Y4W2 734 aaKnown RBP6.15□□□□□ -1.43
ZNF560-201ENST00000301480 CLGNO14967 610 aa6.14□□□□□ -1.43
ZNF560-201ENST00000301480 E9PCH4 1651 aa6.14□□□□□ -1.43
ZNF560-201ENST00000301480 ATF3P18847 181 aa6.13□□□□□ -1.43
ZNF560-201ENST00000301480 SLC26A8Q96RN1 970 aa6.13□□□□□ -1.43
ZNF560-201ENST00000301480 FOXD4L6Q3SYB3 417 aaPredicted RBP6.13□□□□□ -1.43
ZNF560-201ENST00000301480 FOXD4L3Q6VB84 417 aaPredicted RBP6.13□□□□□ -1.43
ZNF560-201ENST00000301480 ROBO1Q9Y6N7 1651 aa6.13□□□□□ -1.43
ZNF560-201ENST00000301480 CDK12Q9NYV4 1490 aaPredicted RBP6.13□□□□□ -1.43
ZNF560-201ENST00000301480 ZNF772Q68DY9 489 aaPredicted RBP6.12□□□□□ -1.43
ZNF560-201ENST00000301480 LOC102724159A0A0B4J2E5 919 aa6.12□□□□□ -1.43
ZNF560-201ENST00000301480 VGFO15240 615 aaPredicted RBP6.12□□□□□ -1.43
ZNF560-201ENST00000301480 PHF14O94880 888 aa6.12□□□□□ -1.43
ZNF560-201ENST00000301480 RGS3P49796 1198 aa6.12□□□□□ -1.43
ZNF560-201ENST00000301480 PWP2Q15269 919 aaKnown RBP6.12□□□□□ -1.43
ZNF560-201ENST00000301480 LHX8Q68G74 356 aa6.12□□□□□ -1.43
ZNF560-201ENST00000301480 ZNF622Q969S3 477 aaKnown RBP eCLIP6.12□□□□□ -1.43
ZNF560-201ENST00000301480 PTCH1Q13635 1447 aa6.12□□□□□ -1.43
ZNF560-201ENST00000301480 SETD5Q9C0A6 1442 aa6.12□□□□□ -1.43
ZNF560-201ENST00000301480 XRN1Q8IZH2 1706 aaKnown RBP6.12□□□□□ -1.43
ZNF560-201ENST00000301480 AEBP1Q8IUX7 1158 aa6.12□□□□□ -1.43
ZNF560-201ENST00000301480 HDAC5Q9UQL6 1122 aa6.12□□□□□ -1.43
ZNF560-201ENST00000301480 CFAP65Q6ZU64 1925 aaKnown RBP6.11□□□□□ -1.43
ZNF560-201ENST00000301480 SPHKAPQ2M3C7 1700 aa6.11□□□□□ -1.43
ZNF560-201ENST00000301480 HFM1A2PYH4 1435 aa6.11□□□□□ -1.43
ZNF560-201ENST00000301480 SHPRHQ149N8 1683 aa6.11□□□□□ -1.43
ZNF560-201ENST00000301480 COL16A1Q07092 1604 aaPredicted RBP6.11□□□□□ -1.43
ZNF560-201ENST00000301480 APBB1O00213 710 aa6.11□□□□□ -1.43
ZNF560-201ENST00000301480 BRD1O95696 1058 aa6.11□□□□□ -1.43
ZNF560-201ENST00000301480 AMOTL2Q9Y2J4 779 aa6.11□□□□□ -1.43
ZNF560-201ENST00000301480 ADGRL3Q9HAR2 1447 aa6.1□□□□□ -1.43
ZNF560-201ENST00000301480 PHLPP1O60346 1717 aa6.1□□□□□ -1.43
ZNF560-201ENST00000301480 ZNF316A6NFI3 1004 aaPredicted RBP6.1□□□□□ -1.43
ZNF560-201ENST00000301480 RRP9O43818 475 aaKnown RBP6.1□□□□□ -1.43
ZNF560-201ENST00000301480 MMP14P50281 582 aa6.1□□□□□ -1.43
ZNF560-201ENST00000301480 NAIPQ13075 1403 aa6.1□□□□□ -1.43
ZNF560-201ENST00000301480 MFAP1P55081 439 aaKnown RBP6.1□□□□□ -1.43
ZNF560-201ENST00000301480 HSP90AA2PQ14568 343 aaPredicted RBP6.1□□□□□ -1.43
ZNF560-201ENST00000301480 LRRC59Q96AG4 307 aaKnown RBP6.1□□□□□ -1.43
ZNF560-201ENST00000301480 LAMC1P11047 1609 aa6.1□□□□□ -1.43
ZNF560-201ENST00000301480 CHGAP10645 457 aaKnown RBP6.09□□□□□ -1.43
ZNF560-201ENST00000301480 HSP90AB4PQ58FF6 505 aa6.09□□□□□ -1.43
ZNF560-201ENST00000301480 SIRT1Q96EB6 747 aa6.09□□□□□ -1.43
ZNF560-201ENST00000301480 YTHDC1Q96MU7 727 aaKnown RBP6.09□□□□□ -1.43
ZNF560-201ENST00000301480 RGS17Q9UGC6 210 aaPredicted RBP6.09□□□□□ -1.43
ZNF560-201ENST00000301480 SIPA1L2Q9P2F8 1722 aaPredicted RBP6.09□□□□□ -1.43
ZNF560-201ENST00000301480 EXOC8Q8IYI6 725 aa6.09□□□□□ -1.44
ZNF560-201ENST00000301480 NEXMIFQ5QGS0 1516 aa6.09□□□□□ -1.44
ZNF560-201ENST00000301480 ANKRD30BQ9BXX2 1392 aa6.08□□□□□ -1.44
ZNF560-201ENST00000301480 MST1RQ04912 1400 aa6.08□□□□□ -1.44
ZNF560-201ENST00000301480 ASXL1Q8IXJ9 1541 aa6.08□□□□□ -1.44
ZNF560-201ENST00000301480 PTPRUQ92729 1446 aa6.08□□□□□ -1.44
ZNF560-201ENST00000301480 NRXN3Q9Y4C0 1643 aa6.08□□□□□ -1.44
ZNF560-201ENST00000301480 MYO5BQ9ULV0 1848 aa6.07□□□□□ -1.44
ZNF560-201ENST00000301480 NHSL1Q5SYE7 1610 aa6.07□□□□□ -1.44
ZNF560-201ENST00000301480 LRPPRCP42704 1394 aaKnown RBP6.07□□□□□ -1.44
ZNF560-201ENST00000301480 ATXN8OSP0DMR3 200 aa6.07□□□□□ -1.44
ZNF560-201ENST00000301480 BRINP3Q76B58 766 aa6.07□□□□□ -1.44
ZNF560-201ENST00000301480 SH3BP1Q9Y3L3 701 aa6.07□□□□□ -1.44
ZNF560-201ENST00000301480 KIF1BO60333 1816 aa6.07□□□□□ -1.44
ZNF560-201ENST00000301480 TECPR2O15040 1411 aa6.07□□□□□ -1.44
ZNF560-201ENST00000301480 APPP05067 770 aa6.07□□□□□ -1.44
ZNF560-201ENST00000301480 C19orf67A6NJJ6 358 aa6.06□□□□□ -1.44
ZNF560-201ENST00000301480 E9PSI1 815 aa6.06□□□□□ -1.44
ZNF560-201ENST00000301480 CALD1Q05682 793 aaKnown RBP6.06□□□□□ -1.44
ZNF560-201ENST00000301480 TMEM51Q9NW97 253 aa6.06□□□□□ -1.44
ZNF560-201ENST00000301480 RBM19Q9Y4C8 960 aaKnown RBP6.06□□□□□ -1.44
ZNF560-201ENST00000301480 RIPOR2Q9Y4F9 1068 aa6.06□□□□□ -1.44
ZNF560-201ENST00000301480 CLTCL1P53675 1640 aa6.06□□□□□ -1.44
ZNF560-201ENST00000301480 SPDYE2BA6NHP3 402 aa6.06□□□□□ -1.44
ZNF560-201ENST00000301480 VGLL3A8MV65 326 aa6.06□□□□□ -1.44
ZNF560-201ENST00000301480 SPDYE6P0CI01 402 aa6.06□□□□□ -1.44
ZNF560-201ENST00000301480 EVX2Q03828 476 aa6.06□□□□□ -1.44
ZNF560-201ENST00000301480 SPDYE2Q495Y8 402 aa6.06□□□□□ -1.44
ZNF560-201ENST00000301480 TMCO4Q5TGY1 634 aa6.06□□□□□ -1.44
ZNF560-201ENST00000301480 CCDC125Q86Z20 511 aa6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms