RNA–Protein interactions for RNA: ENST00000299866.12

TVP23A-201, Transcript of trans-golgi network vesicle protein 23 homolog A, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TVP23A, Length 3,360 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23A-201ENST00000299866 CEP152O94986 1710 aa16.16■□□□□ 0.18
TVP23A-201ENST00000299866 KANK1Q14678 1352 aa16.15■□□□□ 0.18
TVP23A-201ENST00000299866 ZSCAN23Q3MJ62 389 aa16.15■□□□□ 0.18
TVP23A-201ENST00000299866 TTC37Q6PGP7 1564 aa16.15■□□□□ 0.18
TVP23A-201ENST00000299866 CHGAP10645 457 aaKnown RBP16.14■□□□□ 0.17
TVP23A-201ENST00000299866 RBM27Q9P2N5 1060 aaKnown RBP16.14■□□□□ 0.17
TVP23A-201ENST00000299866 PRDM4Q9UKN5 801 aa16.14■□□□□ 0.17
TVP23A-201ENST00000299866 CT47B1P0C2W7 299 aaPredicted RBP16.13■□□□□ 0.17
TVP23A-201ENST00000299866 IPO8O15397 1037 aaKnown RBP16.13■□□□□ 0.17
TVP23A-201ENST00000299866 PRIM1P49642 420 aaKnown RBP16.13■□□□□ 0.17
TVP23A-201ENST00000299866 TMPOP42166 694 aaKnown RBP16.13■□□□□ 0.17
TVP23A-201ENST00000299866 NOL7Q9UMY1 257 aaKnown RBP16.13■□□□□ 0.17
TVP23A-201ENST00000299866 SHPRHQ149N8 1683 aa16.13■□□□□ 0.17
TVP23A-201ENST00000299866 PKP1Q13835 747 aa16.12■□□□□ 0.17
TVP23A-201ENST00000299866 ZNF445P59923 1031 aa16.12■□□□□ 0.17
TVP23A-201ENST00000299866 MAP7D2Q96T17 732 aa16.12■□□□□ 0.17
TVP23A-201ENST00000299866 ERCC6Q03468 1493 aa16.12■□□□□ 0.17
TVP23A-201ENST00000299866 PRPF40AO75400 957 aaKnown RBP16.12■□□□□ 0.17
TVP23A-201ENST00000299866 TERF1P54274 439 aa16.12■□□□□ 0.17
TVP23A-201ENST00000299866 PRDM10Q9NQV6 1147 aa16.12■□□□□ 0.17
TVP23A-201ENST00000299866 PODXL2Q9NZ53 605 aa16.12■□□□□ 0.17
TVP23A-201ENST00000299866 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.12■□□□□ 0.17
TVP23A-201ENST00000299866 PTPRTO14522 1441 aa16.11■□□□□ 0.17
TVP23A-201ENST00000299866 TRIM35Q9UPQ4 493 aa16.11■□□□□ 0.17
TVP23A-201ENST00000299866 ZNF518AQ6AHZ1 1483 aa16.11■□□□□ 0.17
TVP23A-201ENST00000299866 LMBRD1Q9NUN5 540 aa16.1■□□□□ 0.17
TVP23A-201ENST00000299866 AFAP1Q8N556 730 aa16.1■□□□□ 0.17
TVP23A-201ENST00000299866 CHAMP1Q96JM3 812 aa16.1■□□□□ 0.17
TVP23A-201ENST00000299866 SPHKAPQ2M3C7 1700 aa16.1■□□□□ 0.17
TVP23A-201ENST00000299866 FOXD4L5Q5VV16 416 aaPredicted RBP16.1■□□□□ 0.17
TVP23A-201ENST00000299866 FOXD4L4Q8WXT5 416 aaPredicted RBP16.1■□□□□ 0.17
TVP23A-201ENST00000299866 KIF16BQ96L93 1317 aa16.1■□□□□ 0.17
TVP23A-201ENST00000299866 ZNF500O60304 480 aaPredicted RBP16.09■□□□□ 0.17
TVP23A-201ENST00000299866 TMEM132EQ6IEE7 984 aa16.09■□□□□ 0.17
TVP23A-201ENST00000299866 IBTKQ9P2D0 1353 aaPredicted RBP16.09■□□□□ 0.17
TVP23A-201ENST00000299866 CLTCL1P53675 1640 aa16.09■□□□□ 0.17
TVP23A-201ENST00000299866 SPAG9O60271 1321 aaKnown RBP16.09■□□□□ 0.17
TVP23A-201ENST00000299866 CLEC17AQ6ZS10 378 aa16.09■□□□□ 0.17
TVP23A-201ENST00000299866 HS1BP3Q53T59 392 aa16.08■□□□□ 0.17
TVP23A-201ENST00000299866 RNF214Q8ND24 703 aa16.08■□□□□ 0.17
TVP23A-201ENST00000299866 ZKSCAN5Q9Y2L8 839 aa16.08■□□□□ 0.17
TVP23A-201ENST00000299866 AK9Q5TCS8 1911 aa16.08■□□□□ 0.16
TVP23A-201ENST00000299866 NUCB2P80303 420 aa16.08■□□□□ 0.16
TVP23A-201ENST00000299866 CDC45O75419 566 aa16.07■□□□□ 0.16
TVP23A-201ENST00000299866 EFCAB2Q5VUJ9 269 aa16.07■□□□□ 0.16
TVP23A-201ENST00000299866 TRPM2O94759 1503 aa16.07■□□□□ 0.16
TVP23A-201ENST00000299866 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.06■□□□□ 0.16
TVP23A-201ENST00000299866 SYCE3A1L190 88 aa16.06■□□□□ 0.16
TVP23A-201ENST00000299866 KIF3BO15066 747 aa16.06■□□□□ 0.16
TVP23A-201ENST00000299866 PDLIM2Q96JY6 352 aa16.06■□□□□ 0.16
TVP23A-201ENST00000299866 TRAPPC8Q9Y2L5 1435 aa16.06■□□□□ 0.16
TVP23A-201ENST00000299866 ZGPATQ8N5A5 531 aaKnown RBP16.06■□□□□ 0.16
TVP23A-201ENST00000299866 GPT2Q8TD30 523 aa16.06■□□□□ 0.16
TVP23A-201ENST00000299866 GCC1Q96CN9 775 aa16.06■□□□□ 0.16
TVP23A-201ENST00000299866 PTMAP06454 111 aaKnown RBP16.05■□□□□ 0.16
TVP23A-201ENST00000299866 MPNDQ8N594 471 aa16.05■□□□□ 0.16
TVP23A-201ENST00000299866 CD109Q6YHK3 1445 aa16.05■□□□□ 0.16
TVP23A-201ENST00000299866 ELL2O00472 640 aaPredicted RBP16.05■□□□□ 0.16
TVP23A-201ENST00000299866 RABEP1Q15276 862 aa16.05■□□□□ 0.16
TVP23A-201ENST00000299866 CSPP1Q1MSJ5 1256 aa16.05■□□□□ 0.16
TVP23A-201ENST00000299866 ZHX1Q9UKY1 873 aaPredicted RBP16.05■□□□□ 0.16
TVP23A-201ENST00000299866 PLEKHF1Q96S99 279 aa16.04■□□□□ 0.16
TVP23A-201ENST00000299866 PPIP5K1Q6PFW1 1433 aa16.04■□□□□ 0.16
TVP23A-201ENST00000299866 DYNC1I1O14576 645 aa16.04■□□□□ 0.16
TVP23A-201ENST00000299866 ZBTB7BO15156 539 aaPredicted RBP16.04■□□□□ 0.16
TVP23A-201ENST00000299866 GGNBP2Q9H3C7 697 aa16.04■□□□□ 0.16
TVP23A-201ENST00000299866 SENP3Q9H4L4 574 aaPredicted RBP16.04■□□□□ 0.16
TVP23A-201ENST00000299866 NOS1P29475 1434 aa16.04■□□□□ 0.16
TVP23A-201ENST00000299866 SAFB2Q14151 953 aaKnown RBP eCLIP16.04■□□□□ 0.16
TVP23A-201ENST00000299866 UGGT1Q9NYU2 1555 aa16.03■□□□□ 0.16
TVP23A-201ENST00000299866 A0A0U1RQG5 324 aaPredicted RBP16.03■□□□□ 0.16
TVP23A-201ENST00000299866 DNTTIP2Q5QJE6 756 aaKnown RBP16.03■□□□□ 0.16
TVP23A-201ENST00000299866 JARID2Q92833 1246 aaPredicted RBP16.03■□□□□ 0.16
TVP23A-201ENST00000299866 TMEM63CQ9P1W3 806 aa16.03■□□□□ 0.16
TVP23A-201ENST00000299866 NSFL1CQ9UNZ2 370 aaKnown RBP16.03■□□□□ 0.16
TVP23A-201ENST00000299866 GSPT1P15170 499 aaKnown RBP16.03■□□□□ 0.16
TVP23A-201ENST00000299866 SASS6Q6UVJ0 657 aa16.03■□□□□ 0.16
TVP23A-201ENST00000299866 CCDC39Q9UFE4 941 aa16.03■□□□□ 0.16
TVP23A-201ENST00000299866 ABCC11Q96J66 1382 aa16.02■□□□□ 0.16
TVP23A-201ENST00000299866 SIRT2Q8IXJ6 389 aa16.02■□□□□ 0.16
TVP23A-201ENST00000299866 NCBP3Q53F19 620 aaKnown RBP16.02■□□□□ 0.15
TVP23A-201ENST00000299866 CABP2Q9NPB3 220 aa16.01■□□□□ 0.15
TVP23A-201ENST00000299866 PLEKHG5O94827 1062 aa16.01■□□□□ 0.15
TVP23A-201ENST00000299866 CYP2E1P05181 493 aaPredicted RBP16.01■□□□□ 0.15
TVP23A-201ENST00000299866 LRSAM1Q6UWE0 723 aa16.01■□□□□ 0.15
TVP23A-201ENST00000299866 TSC1Q92574 1164 aa16.01■□□□□ 0.15
TVP23A-201ENST00000299866 SMAP1Q8IYB5 467 aaPredicted RBP16.01■□□□□ 0.15
TVP23A-201ENST00000299866 ABCA6Q8N139 1617 aa16.01■□□□□ 0.15
TVP23A-201ENST00000299866 C16orf71Q8IYS4 520 aaPredicted RBP16■□□□□ 0.15
TVP23A-201ENST00000299866 SHROOM2Q13796 1616 aa16■□□□□ 0.15
TVP23A-201ENST00000299866 APBB1O00213 710 aa16■□□□□ 0.15
TVP23A-201ENST00000299866 ALDH1L2Q3SY69 923 aa16■□□□□ 0.15
TVP23A-201ENST00000299866 MTERF4Q7Z6M4 381 aaKnown RBP16■□□□□ 0.15
TVP23A-201ENST00000299866 SBNO2Q9Y2G9 1366 aa15.99■□□□□ 0.15
TVP23A-201ENST00000299866 NUTM2DQ5VT03 806 aaPredicted RBP15.99■□□□□ 0.15
TVP23A-201ENST00000299866 THUMPD2Q9BTF0 503 aaKnown RBP15.99■□□□□ 0.15
TVP23A-201ENST00000299866 ZDHHC9Q9Y397 364 aa15.99■□□□□ 0.15
TVP23A-201ENST00000299866 USP26Q9BXU7 913 aa15.99■□□□□ 0.15
TVP23A-201ENST00000299866 IL16Q14005 1332 aa15.98■□□□□ 0.15
TVP23A-201ENST00000299866 CFAP74Q9C0B2 1584 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms