RNA–Protein interactions for RNA: ENST00000299855.9

MMP3-201, Transcript of matrix metallopeptidase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MMP3, Length 2,016 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP3-201ENST00000299855 PLCH2O75038 1416 aa11.52□□□□□ -0.57
MMP3-201ENST00000299855 DAPK1P53355 1430 aa11.52□□□□□ -0.57
MMP3-201ENST00000299855 DNMT1P26358 1616 aaKnown RBP11.52□□□□□ -0.57
MMP3-201ENST00000299855 ARID4AP29374 1257 aaPredicted RBP11.52□□□□□ -0.57
MMP3-201ENST00000299855 MMP14P50281 582 aa11.52□□□□□ -0.57
MMP3-201ENST00000299855 FNBP4Q8N3X1 1017 aaPredicted RBP11.52□□□□□ -0.57
MMP3-201ENST00000299855 PPP1R1BQ9UD71 204 aaPredicted RBP11.52□□□□□ -0.57
MMP3-201ENST00000299855 RICTORQ6R327 1708 aa11.51□□□□□ -0.57
MMP3-201ENST00000299855 MAP4K4O95819 1239 aaPredicted RBP11.51□□□□□ -0.57
MMP3-201ENST00000299855 SDR16C5Q8N3Y7 309 aa11.51□□□□□ -0.57
MMP3-201ENST00000299855 TROQ12816 1431 aaPredicted RBP11.51□□□□□ -0.57
MMP3-201ENST00000299855 PDE4DQ08499 809 aa11.5□□□□□ -0.57
MMP3-201ENST00000299855 WDR78Q5VTH9 848 aa11.5□□□□□ -0.57
MMP3-201ENST00000299855 FRAT1Q92837 279 aaPredicted RBP11.5□□□□□ -0.57
MMP3-201ENST00000299855 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.5□□□□□ -0.57
MMP3-201ENST00000299855 ARHGEF40Q8TER5 1519 aa11.5□□□□□ -0.57
MMP3-201ENST00000299855 SEMA3EO15041 775 aa11.5□□□□□ -0.57
MMP3-201ENST00000299855 CREB3O43889 395 aa11.5□□□□□ -0.57
MMP3-201ENST00000299855 ZFYVE27Q5T4F4 411 aa11.5□□□□□ -0.57
MMP3-201ENST00000299855 NBPF1Q3BBV0 1214 aa11.49□□□□□ -0.57
MMP3-201ENST00000299855 NLRP13Q86W25 1043 aa11.49□□□□□ -0.57
MMP3-201ENST00000299855 PLSCR2Q9NRY7 297 aa11.49□□□□□ -0.57
MMP3-201ENST00000299855 RALGAPBQ86X10 1494 aa11.49□□□□□ -0.57
MMP3-201ENST00000299855 E9PCH4 1651 aa11.49□□□□□ -0.57
MMP3-201ENST00000299855 MYO5CQ9NQX4 1742 aa11.49□□□□□ -0.57
MMP3-201ENST00000299855 LIG1P18858 919 aa11.48□□□□□ -0.57
MMP3-201ENST00000299855 EFCAB2Q5VUJ9 269 aa11.48□□□□□ -0.57
MMP3-201ENST00000299855 PLEKHH2Q8IVE3 1493 aa11.48□□□□□ -0.57
MMP3-201ENST00000299855 ABCC5O15440 1437 aa11.48□□□□□ -0.57
MMP3-201ENST00000299855 SCAPERQ9BY12 1400 aa11.48□□□□□ -0.57
MMP3-201ENST00000299855 KIAA1107Q9UPP5 1409 aa11.48□□□□□ -0.57
MMP3-201ENST00000299855 ADAMTSL3P82987 1691 aa11.48□□□□□ -0.57
MMP3-201ENST00000299855 METTL14Q9HCE5 456 aaKnown RBP11.48□□□□□ -0.57
MMP3-201ENST00000299855 IVNS1ABPQ9Y6Y0 642 aa11.48□□□□□ -0.57
MMP3-201ENST00000299855 PZPP20742 1482 aa11.47□□□□□ -0.57
MMP3-201ENST00000299855 MAGI2Q86UL8 1455 aa11.47□□□□□ -0.57
MMP3-201ENST00000299855 SH3BP5O60239 455 aa11.47□□□□□ -0.57
MMP3-201ENST00000299855 MCM6Q14566 821 aa11.47□□□□□ -0.57
MMP3-201ENST00000299855 CENPQQ7L2Z9 268 aaPredicted RBP11.47□□□□□ -0.57
MMP3-201ENST00000299855 CIZ1Q9ULV3 898 aaPredicted RBP11.47□□□□□ -0.57
MMP3-201ENST00000299855 ZFYVE16Q7Z3T8 1539 aa11.47□□□□□ -0.57
MMP3-201ENST00000299855 POGZQ7Z3K3 1410 aa11.47□□□□□ -0.57
MMP3-201ENST00000299855 HECW2Q9P2P5 1572 aa11.47□□□□□ -0.57
MMP3-201ENST00000299855 FAM161AQ3B820 660 aa11.47□□□□□ -0.57
MMP3-201ENST00000299855 ARHGEF12Q9NZN5 1544 aa11.47□□□□□ -0.57
MMP3-201ENST00000299855 KDM2BQ8NHM5 1336 aa11.46□□□□□ -0.58
MMP3-201ENST00000299855 PARD3Q8TEW0 1356 aa11.45□□□□□ -0.58
MMP3-201ENST00000299855 PLEKHG3A1L390 1219 aa11.45□□□□□ -0.58
MMP3-201ENST00000299855 EXOC5O00471 708 aa11.45□□□□□ -0.58
MMP3-201ENST00000299855 PTPRMP28827 1452 aa11.45□□□□□ -0.58
MMP3-201ENST00000299855 ARHGAP5Q13017 1502 aa11.45□□□□□ -0.58
MMP3-201ENST00000299855 EIF3JO75822 258 aaKnown RBP11.45□□□□□ -0.58
MMP3-201ENST00000299855 ARHGEF1Q92888 912 aaKnown RBP11.45□□□□□ -0.58
MMP3-201ENST00000299855 CDCA7Q9BWT1 371 aaPredicted RBP11.45□□□□□ -0.58
MMP3-201ENST00000299855 KLHL42Q9P2K6 505 aa11.45□□□□□ -0.58
MMP3-201ENST00000299855 YEATS2Q9ULM3 1422 aa11.44□□□□□ -0.58
MMP3-201ENST00000299855 TRIM66O15016 1216 aa11.44□□□□□ -0.58
MMP3-201ENST00000299855 NRDCO43847 1150 aa11.44□□□□□ -0.58
MMP3-201ENST00000299855 CLEC4GQ6UXB4 293 aa11.44□□□□□ -0.58
MMP3-201ENST00000299855 PNMA2Q9UL42 364 aa11.44□□□□□ -0.58
MMP3-201ENST00000299855 CCDC96Q2M329 555 aa11.43□□□□□ -0.58
MMP3-201ENST00000299855 KRI1Q8N9T8 703 aaKnown RBP11.43□□□□□ -0.58
MMP3-201ENST00000299855 STAC3Q96MF2 364 aa11.43□□□□□ -0.58
MMP3-201ENST00000299855 NBPF20Q3BBV1 942 aa11.43□□□□□ -0.58
MMP3-201ENST00000299855 MADDQ8WXG6 1647 aa11.43□□□□□ -0.58
MMP3-201ENST00000299855 BLMP54132 1417 aaPredicted RBP11.42□□□□□ -0.58
MMP3-201ENST00000299855 APLP1P51693 650 aa11.42□□□□□ -0.58
MMP3-201ENST00000299855 CEP120Q8N960 986 aa11.42□□□□□ -0.58
MMP3-201ENST00000299855 CRBNQ96SW2 442 aa11.42□□□□□ -0.58
MMP3-201ENST00000299855 CARD11Q9BXL7 1154 aa11.42□□□□□ -0.58
MMP3-201ENST00000299855 ADGBQ8N7X0 1667 aa11.42□□□□□ -0.58
MMP3-201ENST00000299855 CDC42BPBQ9Y5S2 1711 aa11.42□□□□□ -0.58
MMP3-201ENST00000299855 PAX3P23760 479 aa11.42□□□□□ -0.58
MMP3-201ENST00000299855 CACTIN-AS1Q8N1I8 211 aa11.42□□□□□ -0.58
MMP3-201ENST00000299855 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.42□□□□□ -0.58
MMP3-201ENST00000299855 MAF1Q9H063 256 aa11.42□□□□□ -0.58
MMP3-201ENST00000299855 ADGRL2O95490 1459 aa11.41□□□□□ -0.58
MMP3-201ENST00000299855 ZNF518AQ6AHZ1 1483 aa11.41□□□□□ -0.58
MMP3-201ENST00000299855 CCDC194A0A1B0GVG4 234 aa11.41□□□□□ -0.58
MMP3-201ENST00000299855 POLA2Q14181 598 aa11.41□□□□□ -0.58
MMP3-201ENST00000299855 C8orf34Q49A92 452 aa11.41□□□□□ -0.58
MMP3-201ENST00000299855 L1TD1Q5T7N2 865 aaKnown RBP11.41□□□□□ -0.58
MMP3-201ENST00000299855 ANP32BQ92688 251 aaKnown RBP11.41□□□□□ -0.58
MMP3-201ENST00000299855 ATP10AO60312 1499 aa11.41□□□□□ -0.58
MMP3-201ENST00000299855 PREX2Q70Z35 1606 aa11.41□□□□□ -0.58
MMP3-201ENST00000299855 SF3A1Q15459 793 aaKnown RBP11.4□□□□□ -0.58
MMP3-201ENST00000299855 CXorf38Q8TB03 319 aa11.4□□□□□ -0.58
MMP3-201ENST00000299855 TRIM44Q96DX7 344 aaPredicted RBP11.4□□□□□ -0.58
MMP3-201ENST00000299855 CDC42BPAQ5VT25 1732 aa11.4□□□□□ -0.58
MMP3-201ENST00000299855 C9orf84Q5VXU9 1444 aa11.4□□□□□ -0.59
MMP3-201ENST00000299855 ZC3H6P61129 1189 aaKnown RBP11.4□□□□□ -0.59
MMP3-201ENST00000299855 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.4□□□□□ -0.59
MMP3-201ENST00000299855 RBM46Q8TBY0 533 aaKnown RBP11.4□□□□□ -0.59
MMP3-201ENST00000299855 RIMS1Q86UR5 1692 aaKnown RBP11.39□□□□□ -0.59
MMP3-201ENST00000299855 PER1O15534 1290 aaPredicted RBP11.39□□□□□ -0.59
MMP3-201ENST00000299855 FRAT2O75474 233 aaPredicted RBP11.39□□□□□ -0.59
MMP3-201ENST00000299855 POM121Q96HA1 1249 aa11.39□□□□□ -0.59
MMP3-201ENST00000299855 SPOCK3Q9BQ16 436 aa11.39□□□□□ -0.59
MMP3-201ENST00000299855 KIF4AO95239 1232 aa11.38□□□□□ -0.59
MMP3-201ENST00000299855 CDCA8Q53HL2 280 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms