RNA–Protein interactions for RNA: ENST00000299413.6

TRIM44-201, Transcript of tripartite motif containing 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM44, Length 12,964 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM44-201ENST00000299413 ZNF76P36508 570 aa11.92□□□□□ -0.5
TRIM44-201ENST00000299413 BAZ1AQ9NRL2 1556 aaPredicted RBP11.92□□□□□ -0.5
TRIM44-201ENST00000299413 CENPHQ9H3R5 247 aa11.91□□□□□ -0.5
TRIM44-201ENST00000299413 EXOC6Q8TAG9 804 aa11.91□□□□□ -0.5
TRIM44-201ENST00000299413 ENOX2Q16206 610 aaKnown RBP11.91□□□□□ -0.5
TRIM44-201ENST00000299413 SLC4A8Q2Y0W8 1093 aa11.91□□□□□ -0.5
TRIM44-201ENST00000299413 E9PSI1 815 aa11.91□□□□□ -0.5
TRIM44-201ENST00000299413 RSPH4AQ5TD94 716 aa11.9□□□□□ -0.5
TRIM44-201ENST00000299413 MNS1Q8NEH6 495 aa11.9□□□□□ -0.5
TRIM44-201ENST00000299413 LIG1P18858 919 aa11.9□□□□□ -0.5
TRIM44-201ENST00000299413 CCDC173Q0VFZ6 552 aa11.9□□□□□ -0.51
TRIM44-201ENST00000299413 FKBP4Q02790 459 aaKnown RBP eCLIP11.89□□□□□ -0.51
TRIM44-201ENST00000299413 SEPT7Q16181 437 aaKnown RBP11.89□□□□□ -0.51
TRIM44-201ENST00000299413 TXNDC2Q86VQ3 553 aa11.89□□□□□ -0.51
TRIM44-201ENST00000299413 CCER2I3L3R5 266 aa11.89□□□□□ -0.51
TRIM44-201ENST00000299413 CNTROBQ8N137 903 aa11.89□□□□□ -0.51
TRIM44-201ENST00000299413 ANKIB1Q9P2G1 1089 aa11.89□□□□□ -0.51
TRIM44-201ENST00000299413 SMG6Q86US8 1419 aaKnown RBP11.89□□□□□ -0.51
TRIM44-201ENST00000299413 PANK1Q8TE04 598 aa11.89□□□□□ -0.51
TRIM44-201ENST00000299413 ROCK1Q13464 1354 aa11.89□□□□□ -0.51
TRIM44-201ENST00000299413 SDF4Q9BRK5 362 aa11.89□□□□□ -0.51
TRIM44-201ENST00000299413 ARHGAP5Q13017 1502 aa11.88□□□□□ -0.51
TRIM44-201ENST00000299413 DZIP1LQ8IYY4 767 aaKnown RBP11.88□□□□□ -0.51
TRIM44-201ENST00000299413 C16orf71Q8IYS4 520 aaPredicted RBP11.88□□□□□ -0.51
TRIM44-201ENST00000299413 PRDM11Q9NQV5 511 aa11.88□□□□□ -0.51
TRIM44-201ENST00000299413 MYBBP1AQ9BQG0 1328 aaKnown RBP11.88□□□□□ -0.51
TRIM44-201ENST00000299413 SURF6O75683 361 aaKnown RBP11.88□□□□□ -0.51
TRIM44-201ENST00000299413 VTI1AQ96AJ9 217 aa11.87□□□□□ -0.51
TRIM44-201ENST00000299413 PTPRGP23470 1445 aa11.87□□□□□ -0.51
TRIM44-201ENST00000299413 TXLNAP40222 546 aa11.87□□□□□ -0.51
TRIM44-201ENST00000299413 RAI14Q9P0K7 980 aa11.87□□□□□ -0.51
TRIM44-201ENST00000299413 IPO9Q96P70 1041 aaKnown RBP11.87□□□□□ -0.51
TRIM44-201ENST00000299413 MPNDQ8N594 471 aa11.87□□□□□ -0.51
TRIM44-201ENST00000299413 RNF214Q8ND24 703 aa11.87□□□□□ -0.51
TRIM44-201ENST00000299413 TEX35Q5T0J7 233 aa11.87□□□□□ -0.51
TRIM44-201ENST00000299413 FAM13BQ9NYF5 915 aa11.87□□□□□ -0.51
TRIM44-201ENST00000299413 TATP17735 454 aaPredicted RBP11.87□□□□□ -0.51
TRIM44-201ENST00000299413 USP47Q96K76 1375 aa11.87□□□□□ -0.51
TRIM44-201ENST00000299413 FAM193AP78312 1265 aa11.86□□□□□ -0.51
TRIM44-201ENST00000299413 DRC1Q96MC2 740 aa11.86□□□□□ -0.51
TRIM44-201ENST00000299413 CCDC69A6NI79 296 aa11.86□□□□□ -0.51
TRIM44-201ENST00000299413 TMOD2Q9NZR1 351 aa11.86□□□□□ -0.51
TRIM44-201ENST00000299413 MTHFSP49914 203 aa11.86□□□□□ -0.51
TRIM44-201ENST00000299413 INTS3Q68E01 1043 aaKnown RBP11.86□□□□□ -0.51
TRIM44-201ENST00000299413 TDO2P48775 406 aa11.85□□□□□ -0.51
TRIM44-201ENST00000299413 CCDC158Q5M9N0 1113 aa11.85□□□□□ -0.51
TRIM44-201ENST00000299413 DEF6Q9H4E7 631 aa11.85□□□□□ -0.51
TRIM44-201ENST00000299413 HSP90AA2PQ14568 343 aaPredicted RBP11.85□□□□□ -0.51
TRIM44-201ENST00000299413 PHLDB1Q86UU1 1377 aa11.85□□□□□ -0.51
TRIM44-201ENST00000299413 ZPR1O75312 459 aa11.85□□□□□ -0.51
TRIM44-201ENST00000299413 WDHD1O75717 1129 aaPredicted RBP11.85□□□□□ -0.51
TRIM44-201ENST00000299413 PLEKHO1Q53GL0 409 aaPredicted RBP11.85□□□□□ -0.51
TRIM44-201ENST00000299413 TAX1BP1Q86VP1 789 aa11.85□□□□□ -0.51
TRIM44-201ENST00000299413 API5Q9BZZ5 524 aaKnown RBP11.85□□□□□ -0.51
TRIM44-201ENST00000299413 CCDC181Q5TID7 509 aa11.84□□□□□ -0.51
TRIM44-201ENST00000299413 CDR1P51861 262 aa11.84□□□□□ -0.51
TRIM44-201ENST00000299413 DDX19BQ9UMR2 479 aa11.84□□□□□ -0.51
TRIM44-201ENST00000299413 CLEC11AQ9Y240 323 aa11.84□□□□□ -0.51
TRIM44-201ENST00000299413 CCDC88BA6NC98 1476 aa11.84□□□□□ -0.51
TRIM44-201ENST00000299413 SPC24Q8NBT2 197 aa11.84□□□□□ -0.51
TRIM44-201ENST00000299413 CRACR2BQ8N4Y2 399 aaPredicted RBP11.84□□□□□ -0.51
TRIM44-201ENST00000299413 ZNF530Q6P9A1 599 aaPredicted RBP11.84□□□□□ -0.51
TRIM44-201ENST00000299413 SOGA3Q5TF21 947 aa11.83□□□□□ -0.52
TRIM44-201ENST00000299413 FAM177A1Q8N128 213 aaPredicted RBP11.83□□□□□ -0.52
TRIM44-201ENST00000299413 MYO6Q9UM54 1294 aa11.83□□□□□ -0.52
TRIM44-201ENST00000299413 ERC1Q8IUD2 1116 aa11.83□□□□□ -0.52
TRIM44-201ENST00000299413 UBA5Q9GZZ9 404 aa11.83□□□□□ -0.52
TRIM44-201ENST00000299413 CENPQQ7L2Z9 268 aaPredicted RBP11.83□□□□□ -0.52
TRIM44-201ENST00000299413 MIA2Q96PC5 1412 aa11.83□□□□□ -0.52
TRIM44-201ENST00000299413 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.82□□□□□ -0.524e-33■■■□□ 15.9
TRIM44-201ENST00000299413 TIMELESSQ9UNS1 1208 aa11.82□□□□□ -0.52
TRIM44-201ENST00000299413 RRP1P56182 461 aaKnown RBP11.82□□□□□ -0.52
TRIM44-201ENST00000299413 FIBPO43427 364 aa11.82□□□□□ -0.52
TRIM44-201ENST00000299413 LRP2BPQ9P2M1 347 aa11.82□□□□□ -0.52
TRIM44-201ENST00000299413 NGLY1Q96IV0 654 aa11.82□□□□□ -0.52
TRIM44-201ENST00000299413 TSPYL1Q9H0U9 437 aa11.82□□□□□ -0.52
TRIM44-201ENST00000299413 CCDC57Q2TAC2 916 aa11.82□□□□□ -0.52
TRIM44-201ENST00000299413 AXDND1Q5T1B0 1012 aaPredicted RBP11.81□□□□□ -0.52
TRIM44-201ENST00000299413 DHX8Q14562 1220 aaKnown RBP11.81□□□□□ -0.52
TRIM44-201ENST00000299413 DHX57Q6P158 1386 aaKnown RBP11.81□□□□□ -0.52
TRIM44-201ENST00000299413 ZC3H6P61129 1189 aaKnown RBP11.81□□□□□ -0.52
TRIM44-201ENST00000299413 RAD54L2Q9Y4B4 1467 aa11.81□□□□□ -0.52
TRIM44-201ENST00000299413 HMGN5P82970 282 aaKnown RBP11.81□□□□□ -0.52
TRIM44-201ENST00000299413 TAF3Q5VWG9 929 aa11.81□□□□□ -0.52
TRIM44-201ENST00000299413 TNNT1P13805 278 aa11.81□□□□□ -0.52
TRIM44-201ENST00000299413 NAT10Q9H0A0 1025 aaKnown RBP11.81□□□□□ -0.52
TRIM44-201ENST00000299413 H0YHG0 523 aa11.81□□□□□ -0.52
TRIM44-201ENST00000299413 ZRSR2Q15696 482 aaKnown RBP11.81□□□□□ -0.52
TRIM44-201ENST00000299413 PRAM1Q96QH2 718 aa11.8□□□□□ -0.52
TRIM44-201ENST00000299413 TRIM5Q9C035 493 aa11.8□□□□□ -0.52
TRIM44-201ENST00000299413 FEZ1Q99689 392 aa11.8□□□□□ -0.52
TRIM44-201ENST00000299413 STK38Q15208 465 aa11.8□□□□□ -0.52
TRIM44-201ENST00000299413 CCDC96Q2M329 555 aa11.8□□□□□ -0.52
TRIM44-201ENST00000299413 POLR3DP05423 398 aaPredicted RBP11.8□□□□□ -0.52
TRIM44-201ENST00000299413 GNAI1P63096 354 aa11.8□□□□□ -0.52
TRIM44-201ENST00000299413 RUNDC1Q96C34 613 aa11.8□□□□□ -0.52
TRIM44-201ENST00000299413 VPS8Q8N3P4 1428 aa11.8□□□□□ -0.52
TRIM44-201ENST00000299413 KINO60870 393 aaKnown RBP11.8□□□□□ -0.52
TRIM44-201ENST00000299413 ABCF2Q9UG63 623 aa11.8□□□□□ -0.52
TRIM44-201ENST00000299413 CCDC191Q8NCU4 936 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms