RNA–Protein interactions for RNA: ENST00000297439.3

DEFB1-201, Transcript of defensin beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DEFB1, Length 478 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEFB1-201ENST00000297439 RASEFQ8IZ41 740 aa8.65□□□□□ -1.02
DEFB1-201ENST00000297439 ANKRD26Q9UPS8 1709 aa8.65□□□□□ -1.03
DEFB1-201ENST00000297439 KDM2BQ8NHM5 1336 aa8.64□□□□□ -1.03
DEFB1-201ENST00000297439 MAP3K13O43283 966 aa8.64□□□□□ -1.03
DEFB1-201ENST00000297439 BMP2KQ9NSY1 1161 aaPredicted RBP8.64□□□□□ -1.03
DEFB1-201ENST00000297439 RAPGEF3O95398 923 aa8.63□□□□□ -1.03
DEFB1-201ENST00000297439 TIE1P35590 1138 aa8.63□□□□□ -1.03
DEFB1-201ENST00000297439 IDI1Q13907 227 aa8.63□□□□□ -1.03
DEFB1-201ENST00000297439 CENPQQ7L2Z9 268 aaPredicted RBP8.63□□□□□ -1.03
DEFB1-201ENST00000297439 PLCD3Q8N3E9 789 aa8.63□□□□□ -1.03
DEFB1-201ENST00000297439 ZMYM3Q14202 1370 aa8.62□□□□□ -1.03
DEFB1-201ENST00000297439 CDC42BPGQ6DT37 1551 aa8.62□□□□□ -1.03
DEFB1-201ENST00000297439 PDE3AQ14432 1141 aa8.62□□□□□ -1.03
DEFB1-201ENST00000297439 POTEGQ6S5H5 508 aa8.62□□□□□ -1.03
DEFB1-201ENST00000297439 MORC1Q86VD1 984 aa8.62□□□□□ -1.03
DEFB1-201ENST00000297439 WDR63Q8IWG1 891 aa8.62□□□□□ -1.03
DEFB1-201ENST00000297439 RUNDC1Q96C34 613 aa8.62□□□□□ -1.03
DEFB1-201ENST00000297439 TRAK1Q9UPV9 953 aa8.62□□□□□ -1.03
DEFB1-201ENST00000297439 ARHGEF40Q8TER5 1519 aa8.62□□□□□ -1.03
DEFB1-201ENST00000297439 NLRP1Q9C000 1473 aa8.62□□□□□ -1.03
DEFB1-201ENST00000297439 YTHDC2Q9H6S0 1430 aaKnown RBP8.62□□□□□ -1.03
DEFB1-201ENST00000297439 RIMBP3CA6NJZ7 1639 aa8.62□□□□□ -1.03
DEFB1-201ENST00000297439 RIMBP3BA6NNM3 1639 aa8.62□□□□□ -1.03
DEFB1-201ENST00000297439 RIMBP3Q9UFD9 1639 aa8.62□□□□□ -1.03
DEFB1-201ENST00000297439 ALKQ9UM73 1620 aa8.62□□□□□ -1.03
DEFB1-201ENST00000297439 SETD1AO15047 1707 aaKnown RBP8.61□□□□□ -1.03
DEFB1-201ENST00000297439 ANP32AP39687 249 aaKnown RBP8.61□□□□□ -1.03
DEFB1-201ENST00000297439 CFAP53Q96M91 514 aa8.61□□□□□ -1.03
DEFB1-201ENST00000297439 CRBNQ96SW2 442 aa8.61□□□□□ -1.03
DEFB1-201ENST00000297439 SCUBE2Q9NQ36 999 aa8.61□□□□□ -1.03
DEFB1-201ENST00000297439 TRPC6Q9Y210 931 aa8.61□□□□□ -1.03
DEFB1-201ENST00000297439 COL3A1P02461 1466 aaPredicted RBP8.61□□□□□ -1.03
DEFB1-201ENST00000297439 A2ML1A8K2U0 1454 aa8.6□□□□□ -1.03
DEFB1-201ENST00000297439 ATP7BP35670 1465 aa8.6□□□□□ -1.03
DEFB1-201ENST00000297439 CD163L1Q9NR16 1453 aa8.6□□□□□ -1.03
DEFB1-201ENST00000297439 APAF1O14727 1248 aa8.6□□□□□ -1.03
DEFB1-201ENST00000297439 CT47B1P0C2W7 299 aaPredicted RBP8.6□□□□□ -1.03
DEFB1-201ENST00000297439 CHGAP10645 457 aaKnown RBP8.6□□□□□ -1.03
DEFB1-201ENST00000297439 IPO9Q96P70 1041 aaKnown RBP8.6□□□□□ -1.03
DEFB1-201ENST00000297439 BACH2Q9BYV9 841 aa8.6□□□□□ -1.03
DEFB1-201ENST00000297439 SLC12A5Q9H2X9 1139 aa8.6□□□□□ -1.03
DEFB1-201ENST00000297439 ZBTB47Q9UFB7 747 aaPredicted RBP8.6□□□□□ -1.03
DEFB1-201ENST00000297439 NOP58Q9Y2X3 529 aaKnown RBP8.6□□□□□ -1.03
DEFB1-201ENST00000297439 MYO5BQ9ULV0 1848 aa8.59□□□□□ -1.03
DEFB1-201ENST00000297439 ERICH6Q7L0X2 663 aa8.59□□□□□ -1.03
DEFB1-201ENST00000297439 WWC1Q8IX03 1113 aa8.59□□□□□ -1.03
DEFB1-201ENST00000297439 SALL2Q9Y467 1007 aaPredicted RBP8.59□□□□□ -1.03
DEFB1-201ENST00000297439 TECPR2O15040 1411 aa8.59□□□□□ -1.03
DEFB1-201ENST00000297439 KNDC1Q76NI1 1749 aa8.59□□□□□ -1.03
DEFB1-201ENST00000297439 A0A1W2PP64 1363 aa8.59□□□□□ -1.03
DEFB1-201ENST00000297439 PNPLA6Q8IY17 1366 aa8.59□□□□□ -1.03
DEFB1-201ENST00000297439 PDE4AP27815 886 aa8.58□□□□□ -1.04
DEFB1-201ENST00000297439 TMEM132EQ6IEE7 984 aa8.58□□□□□ -1.04
DEFB1-201ENST00000297439 SIRT1Q96EB6 747 aa8.58□□□□□ -1.04
DEFB1-201ENST00000297439 SGIP1Q9BQI5 828 aa8.58□□□□□ -1.04
DEFB1-201ENST00000297439 TERF2IPQ9NYB0 399 aa8.58□□□□□ -1.04
DEFB1-201ENST00000297439 IL16Q14005 1332 aa8.57□□□□□ -1.04
DEFB1-201ENST00000297439 FAM135BQ49AJ0 1406 aa8.57□□□□□ -1.04
DEFB1-201ENST00000297439 POTEFA5A3E0 1075 aa8.57□□□□□ -1.04
DEFB1-201ENST00000297439 TTLL13PA6NNM8 815 aa8.57□□□□□ -1.04
DEFB1-201ENST00000297439 CFAP65Q6ZU64 1925 aaKnown RBP8.56□□□□□ -1.04
DEFB1-201ENST00000297439 NRXN3Q9Y4C0 1643 aa8.56□□□□□ -1.04
DEFB1-201ENST00000297439 PLIN1O60240 522 aa8.56□□□□□ -1.04
DEFB1-201ENST00000297439 PCDH10Q9P2E7 1040 aa8.56□□□□□ -1.04
DEFB1-201ENST00000297439 RIMS2Q9UQ26 1411 aa8.55□□□□□ -1.04
DEFB1-201ENST00000297439 CPS1P31327 1500 aa8.55□□□□□ -1.04
DEFB1-201ENST00000297439 KIF20BQ96Q89 1820 aa8.55□□□□□ -1.04
DEFB1-201ENST00000297439 SENP3-EIF4A1A0A087X0R7 540 aa8.55□□□□□ -1.04
DEFB1-201ENST00000297439 MTHFSP49914 203 aa8.55□□□□□ -1.04
DEFB1-201ENST00000297439 C20orf194Q5TEA3 1177 aa8.55□□□□□ -1.04
DEFB1-201ENST00000297439 CCDC146Q8IYE0 955 aa8.55□□□□□ -1.04
DEFB1-201ENST00000297439 TCP11L2Q8N4U5 519 aa8.55□□□□□ -1.04
DEFB1-201ENST00000297439 MYH16Q9H6N6 1097 aa8.55□□□□□ -1.04
DEFB1-201ENST00000297439 PCDHB13Q9Y5F0 798 aa8.55□□□□□ -1.04
DEFB1-201ENST00000297439 SEC24BO95487 1268 aa8.54□□□□□ -1.04
DEFB1-201ENST00000297439 NUBP1P53384 320 aa8.54□□□□□ -1.04
DEFB1-201ENST00000297439 ABCF1Q8NE71 845 aaKnown RBP eCLIP8.54□□□□□ -1.04
DEFB1-201ENST00000297439 PNNQ9H307 717 aaKnown RBP8.54□□□□□ -1.04
DEFB1-201ENST00000297439 CPSF1Q10570 1443 aaKnown RBP8.54□□□□□ -1.04
DEFB1-201ENST00000297439 PPIP5K1Q6PFW1 1433 aa8.54□□□□□ -1.04
DEFB1-201ENST00000297439 AATKQ6ZMQ8 1374 aa8.53□□□□□ -1.04
DEFB1-201ENST00000297439 FAM69CQ0P6D2 419 aa8.53□□□□□ -1.04
DEFB1-201ENST00000297439 HDGFL2Q7Z4V5 671 aaPredicted RBP8.53□□□□□ -1.04
DEFB1-201ENST00000297439 DDRGK1Q96HY6 314 aa8.53□□□□□ -1.04
DEFB1-201ENST00000297439 EDC4Q6P2E9 1401 aaKnown RBP8.53□□□□□ -1.04
DEFB1-201ENST00000297439 MAPK8IP3Q9UPT6 1336 aa8.53□□□□□ -1.04
DEFB1-201ENST00000297439 FYB1O15117 783 aa8.52□□□□□ -1.05
DEFB1-201ENST00000297439 RARSP54136 660 aaKnown RBP8.52□□□□□ -1.05
DEFB1-201ENST00000297439 FAM161AQ3B820 660 aa8.52□□□□□ -1.05
DEFB1-201ENST00000297439 IER5LQ5T953 404 aa8.52□□□□□ -1.05
DEFB1-201ENST00000297439 CLUAP1Q96AJ1 413 aa8.52□□□□□ -1.05
DEFB1-201ENST00000297439 ZNF428Q96B54 188 aa8.52□□□□□ -1.05
DEFB1-201ENST00000297439 FAM163AQ96GL9 167 aaPredicted RBP8.52□□□□□ -1.05
DEFB1-201ENST00000297439 PRAM1Q96QH2 718 aa8.52□□□□□ -1.05
DEFB1-201ENST00000297439 PLEKHF1Q96S99 279 aa8.52□□□□□ -1.05
DEFB1-201ENST00000297439 CABP2Q9NPB3 220 aa8.52□□□□□ -1.05
DEFB1-201ENST00000297439 COLQQ9Y215 455 aaPredicted RBP8.52□□□□□ -1.05
DEFB1-201ENST00000297439 VIRMAQ69YN4 1812 aaKnown RBP8.52□□□□□ -1.05
DEFB1-201ENST00000297439 CDK12Q9NYV4 1490 aaPredicted RBP8.51□□□□□ -1.05
DEFB1-201ENST00000297439 HDGFP51858 240 aaKnown RBP8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms