RNA–Protein interactions for RNA: ENST00000296953.6

CREBRF-201, Transcript of CREB3 regulatory factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CREBRF, Length 7,778 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CREBRF-201ENST00000296953 TPM2P07951 284 aa3.94□□□□□ -1.78
CREBRF-201ENST00000296953 HNRNPUL2Q1KMD3 747 aaKnown RBP3.94□□□□□ -1.78
CREBRF-201ENST00000296953 TEX13AQ9BXU3 409 aaPredicted RBP3.94□□□□□ -1.78
CREBRF-201ENST00000296953 SALL2Q9Y467 1007 aaPredicted RBP3.94□□□□□ -1.78
CREBRF-201ENST00000296953 SH3TC1Q8TE82 1336 aa3.94□□□□□ -1.78
CREBRF-201ENST00000296953 SHANK2Q9UPX8 1470 aa3.94□□□□□ -1.78
CREBRF-201ENST00000296953 PLSCR1O15162 318 aa3.94□□□□□ -1.78
CREBRF-201ENST00000296953 TRPV5Q9NQA5 729 aa3.94□□□□□ -1.78
CREBRF-201ENST00000296953 CPS1P31327 1500 aa3.94□□□□□ -1.78
CREBRF-201ENST00000296953 CPP00450 1065 aa3.93□□□□□ -1.78
CREBRF-201ENST00000296953 HNRNPUQ00839 825 aaKnown RBP eCLIP3.93□□□□□ -1.78
CREBRF-201ENST00000296953 CAVIN1Q6NZI2 390 aaKnown RBP3.93□□□□□ -1.78
CREBRF-201ENST00000296953 DHX30Q7L2E3 1194 aaKnown RBP eCLIP3.93□□□□□ -1.78
CREBRF-201ENST00000296953 ERBB3P21860 1342 aa3.93□□□□□ -1.78
CREBRF-201ENST00000296953 CSPP1Q1MSJ5 1256 aa3.93□□□□□ -1.78
CREBRF-201ENST00000296953 DCAF11Q8TEB1 546 aa3.93□□□□□ -1.78
CREBRF-201ENST00000296953 PDCL3Q9H2J4 239 aa3.93□□□□□ -1.78
CREBRF-201ENST00000296953 CGNL1Q0VF96 1302 aa3.93□□□□□ -1.78
CREBRF-201ENST00000296953 DEKP35659 375 aaKnown RBP3.93□□□□□ -1.78
CREBRF-201ENST00000296953 CDK12Q9NYV4 1490 aaPredicted RBP3.93□□□□□ -1.78
CREBRF-201ENST00000296953 PHF14O94880 888 aa3.93□□□□□ -1.78
CREBRF-201ENST00000296953 NOS1P29475 1434 aa3.93□□□□□ -1.78
CREBRF-201ENST00000296953 MAP3K4Q9Y6R4 1608 aa3.92□□□□□ -1.78
CREBRF-201ENST00000296953 WNT7AO00755 349 aa3.92□□□□□ -1.78
CREBRF-201ENST00000296953 PLEKHG5O94827 1062 aa3.92□□□□□ -1.78
CREBRF-201ENST00000296953 IKZF1Q13422 519 aa3.92□□□□□ -1.78
CREBRF-201ENST00000296953 CHMP4CQ96CF2 233 aa3.92□□□□□ -1.78
CREBRF-201ENST00000296953 PER1O15534 1290 aaPredicted RBP3.92□□□□□ -1.78
CREBRF-201ENST00000296953 KAT6BQ8WYB5 2073 aa3.92□□□□□ -1.78
CREBRF-201ENST00000296953 KIAA0232Q92628 1395 aa3.92□□□□□ -1.78
CREBRF-201ENST00000296953 CCDC102AQ96A19 550 aa3.92□□□□□ -1.78
CREBRF-201ENST00000296953 KIAA1522Q9P206 1035 aaPredicted RBP3.92□□□□□ -1.78
CREBRF-201ENST00000296953 ERBINQ96RT1 1412 aa3.92□□□□□ -1.78
CREBRF-201ENST00000296953 PARD3Q8TEW0 1356 aa3.92□□□□□ -1.78
CREBRF-201ENST00000296953 NRDCO43847 1150 aa3.92□□□□□ -1.78
CREBRF-201ENST00000296953 SF3B3Q15393 1217 aaKnown RBP3.92□□□□□ -1.78
CREBRF-201ENST00000296953 MAP2P11137 1827 aaKnown RBP3.92□□□□□ -1.78
CREBRF-201ENST00000296953 TPM3P06753 285 aa3.92□□□□□ -1.78
CREBRF-201ENST00000296953 RIMS1Q86UR5 1692 aaKnown RBP3.92□□□□□ -1.78
CREBRF-201ENST00000296953 EXOC5O00471 708 aa3.91□□□□□ -1.78
CREBRF-201ENST00000296953 CREB5Q02930 508 aa3.91□□□□□ -1.78
CREBRF-201ENST00000296953 SPINK5Q9NQ38 1064 aaPredicted RBP3.91□□□□□ -1.78
CREBRF-201ENST00000296953 RTN2O75298 545 aa3.91□□□□□ -1.78
CREBRF-201ENST00000296953 RPS6KA5O75582 802 aa3.91□□□□□ -1.78
CREBRF-201ENST00000296953 NUDCQ9Y266 331 aa3.91□□□□□ -1.78
CREBRF-201ENST00000296953 UBR1Q8IWV7 1749 aa3.91□□□□□ -1.78
CREBRF-201ENST00000296953 PIK3R4Q99570 1358 aa3.91□□□□□ -1.78
CREBRF-201ENST00000296953 CHD2O14647 1828 aaKnown RBP3.91□□□□□ -1.78
CREBRF-201ENST00000296953 GSE1Q14687 1217 aa3.91□□□□□ -1.78
CREBRF-201ENST00000296953 SPCS2Q15005 226 aa3.91□□□□□ -1.78
CREBRF-201ENST00000296953 CFTRP13569 1480 aa3.91□□□□□ -1.78
CREBRF-201ENST00000296953 ADAMTS7Q9UKP4 1686 aa3.91□□□□□ -1.78
CREBRF-201ENST00000296953 SENP2Q9HC62 589 aa3.91□□□□□ -1.78
CREBRF-201ENST00000296953 FANCAO15360 1455 aa3.91□□□□□ -1.78
CREBRF-201ENST00000296953 BRD4O60885 1362 aaPredicted RBP3.91□□□□□ -1.78
CREBRF-201ENST00000296953 MTA1Q13330 715 aa3.91□□□□□ -1.78
CREBRF-201ENST00000296953 ZNF428Q96B54 188 aa3.91□□□□□ -1.78
CREBRF-201ENST00000296953 MRS2Q9HD23 443 aa3.91□□□□□ -1.78
CREBRF-201ENST00000296953 MUM1L1Q5H9M0 696 aa3.9□□□□□ -1.78
CREBRF-201ENST00000296953 MYH16Q9H6N6 1097 aa3.9□□□□□ -1.78
CREBRF-201ENST00000296953 RALGAPBQ86X10 1494 aa3.9□□□□□ -1.78
CREBRF-201ENST00000296953 WIZO95785 1651 aa3.9□□□□□ -1.78
CREBRF-201ENST00000296953 TATDN2Q93075 761 aa3.9□□□□□ -1.78
CREBRF-201ENST00000296953 LRRC9Q6ZRR7 1453 aa3.9□□□□□ -1.78
CREBRF-201ENST00000296953 COQ9O75208 318 aa3.9□□□□□ -1.78
CREBRF-201ENST00000296953 CT47B1P0C2W7 299 aaPredicted RBP3.9□□□□□ -1.78
CREBRF-201ENST00000296953 IFT140Q96RY7 1462 aa3.9□□□□□ -1.78
CREBRF-201ENST00000296953 DDX11L8A8MPP1 907 aa3.9□□□□□ -1.79
CREBRF-201ENST00000296953 MRE11P49959 708 aa3.9□□□□□ -1.79
CREBRF-201ENST00000296953 FGD5Q6ZNL6 1462 aa3.9□□□□□ -1.79
CREBRF-201ENST00000296953 GLI2P10070 1586 aa3.9□□□□□ -1.79
CREBRF-201ENST00000296953 PZPP20742 1482 aa3.9□□□□□ -1.79
CREBRF-201ENST00000296953 A0A0U1RQG5 324 aaPredicted RBP3.9□□□□□ -1.79
CREBRF-201ENST00000296953 ARAP3Q8WWN8 1544 aa3.9□□□□□ -1.79
CREBRF-201ENST00000296953 MSH6P52701 1360 aa3.9□□□□□ -1.79
CREBRF-201ENST00000296953 WDR7Q9Y4E6 1490 aa3.9□□□□□ -1.79
CREBRF-201ENST00000296953 TUBB4AP04350 444 aa3.9□□□□□ -1.79
CREBRF-201ENST00000296953 EGFL6Q8IUX8 553 aa3.9□□□□□ -1.79
CREBRF-201ENST00000296953 GBP4Q96PP9 640 aa3.9□□□□□ -1.79
CREBRF-201ENST00000296953 SAMD9LQ8IVG5 1584 aa3.9□□□□□ -1.79
CREBRF-201ENST00000296953 SBNO1A3KN83 1393 aa3.9□□□□□ -1.79
CREBRF-201ENST00000296953 PTPRKQ15262 1439 aa3.9□□□□□ -1.79
CREBRF-201ENST00000296953 FAM135BQ49AJ0 1406 aa3.9□□□□□ -1.79
CREBRF-201ENST00000296953 PLCB3Q01970 1234 aa3.89□□□□□ -1.79
CREBRF-201ENST00000296953 DMTNQ08495 405 aa3.89□□□□□ -1.79
CREBRF-201ENST00000296953 ATL2Q8NHH9 583 aa3.89□□□□□ -1.79
CREBRF-201ENST00000296953 XAGE2Q96GT9 111 aa3.89□□□□□ -1.79
CREBRF-201ENST00000296953 CUL7Q14999 1698 aa3.89□□□□□ -1.79
CREBRF-201ENST00000296953 ARHGEF28Q8N1W1 1705 aaKnown RBP3.89□□□□□ -1.79
CREBRF-201ENST00000296953 MCCP23508 829 aa3.89□□□□□ -1.79
CREBRF-201ENST00000296953 PDZRN4Q6ZMN7 1036 aaPredicted RBP3.89□□□□□ -1.79
CREBRF-201ENST00000296953 ATAD2Q6PL18 1390 aa3.89□□□□□ -1.79
CREBRF-201ENST00000296953 DNMT1P26358 1616 aaKnown RBP3.89□□□□□ -1.79
CREBRF-201ENST00000296953 ANKRD7Q92527 254 aa3.89□□□□□ -1.79
CREBRF-201ENST00000296953 TBC1D30Q9Y2I9 924 aa3.89□□□□□ -1.79
CREBRF-201ENST00000296953 C9orf84Q5VXU9 1444 aa3.89□□□□□ -1.79
CREBRF-201ENST00000296953 RAPGEF6Q8TEU7 1601 aa3.89□□□□□ -1.79
CREBRF-201ENST00000296953 RPAP1Q9BWH6 1393 aaPredicted RBP3.89□□□□□ -1.79
CREBRF-201ENST00000296953 HSP90AA1P07900 732 aaKnown RBP3.89□□□□□ -1.79
CREBRF-201ENST00000296953 BCL9LQ86UU0 1499 aa3.89□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms