RNA–Protein interactions for RNA: ENST00000296051.6

HPS3-201, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HPS3, Length 4,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-201ENST00000296051 WAPLQ7Z5K2 1190 aa16.3■□□□□ 0.2
HPS3-201ENST00000296051 ABCA10Q8WWZ4 1543 aa16.3■□□□□ 0.2
HPS3-201ENST00000296051 APPP05067 770 aa16.3■□□□□ 0.2
HPS3-201ENST00000296051 RARSP54136 660 aaKnown RBP16.3■□□□□ 0.2
HPS3-201ENST00000296051 ATF7IPQ6VMQ6 1270 aa16.3■□□□□ 0.2
HPS3-201ENST00000296051 MARCH6O60337 910 aa16.3■□□□□ 0.2
HPS3-201ENST00000296051 INTS3Q68E01 1043 aaKnown RBP16.3■□□□□ 0.2
HPS3-201ENST00000296051 RASSF8Q8NHQ8 419 aa16.3■□□□□ 0.2
HPS3-201ENST00000296051 NGLY1Q96IV0 654 aa16.3■□□□□ 0.2
HPS3-201ENST00000296051 TNNQ9UQP3 1299 aa16.29■□□□□ 0.2
HPS3-201ENST00000296051 SULT6B1Q6IMI4 303 aa16.29■□□□□ 0.2
HPS3-201ENST00000296051 EFCAB5A4FU69 1503 aa16.29■□□□□ 0.2
HPS3-201ENST00000296051 TMEM57Q8N5G2 664 aa16.28■□□□□ 0.2
HPS3-201ENST00000296051 ZNF692Q9BU19 519 aaPredicted RBP16.28■□□□□ 0.2
HPS3-201ENST00000296051 VPS37CA5D8V6 355 aaPredicted RBP16.28■□□□□ 0.2
HPS3-201ENST00000296051 GNAI1P63096 354 aa16.28■□□□□ 0.2
HPS3-201ENST00000296051 ABCC5O15440 1437 aa16.28■□□□□ 0.2
HPS3-201ENST00000296051 PRKAR2BP31323 418 aa16.28■□□□□ 0.2
HPS3-201ENST00000296051 PLEKHH2Q8IVE3 1493 aa16.28■□□□□ 0.2
HPS3-201ENST00000296051 API5Q9BZZ5 524 aaKnown RBP16.28■□□□□ 0.2
HPS3-201ENST00000296051 K7ELQ4 463 aaPredicted RBP16.27■□□□□ 0.2
HPS3-201ENST00000296051 CCDC173Q0VFZ6 552 aa16.27■□□□□ 0.2
HPS3-201ENST00000296051 UBE2Q2Q8WVN8 375 aa16.27■□□□□ 0.2
HPS3-201ENST00000296051 G3BP1Q13283 466 aaKnown RBP eCLIP16.27■□□□□ 0.2
HPS3-201ENST00000296051 CCDC27Q2M243 656 aa16.27■□□□□ 0.2
HPS3-201ENST00000296051 NEUROD6Q96NK8 337 aa16.27■□□□□ 0.2
HPS3-201ENST00000296051 PCDHB15Q9Y5E8 787 aa16.27■□□□□ 0.2
HPS3-201ENST00000296051 AAMPQ13685 434 aa16.27■□□□□ 0.19
HPS3-201ENST00000296051 ZNF530Q6P9A1 599 aaPredicted RBP16.27■□□□□ 0.19
HPS3-201ENST00000296051 TPM2P07951 284 aa16.26■□□□□ 0.19
HPS3-201ENST00000296051 RRP9O43818 475 aaKnown RBP16.26■□□□□ 0.19
HPS3-201ENST00000296051 CSPP1Q1MSJ5 1256 aa16.26■□□□□ 0.19
HPS3-201ENST00000296051 CHD1LQ86WJ1 897 aa16.26■□□□□ 0.19
HPS3-201ENST00000296051 THUMPD2Q9BTF0 503 aaKnown RBP16.26■□□□□ 0.19
HPS3-201ENST00000296051 ZNF771Q7L3S4 317 aaPredicted RBP16.26■□□□□ 0.19
HPS3-201ENST00000296051 IFIT2P09913 472 aaKnown RBP16.25■□□□□ 0.19
HPS3-201ENST00000296051 TNPO1Q92973 898 aaKnown RBP16.25■□□□□ 0.19
HPS3-201ENST00000296051 CTDP1Q9Y5B0 961 aaPredicted RBP16.25■□□□□ 0.19
HPS3-201ENST00000296051 CCDC61Q9Y6R9 512 aa16.25■□□□□ 0.19
HPS3-201ENST00000296051 CABP4P57796 275 aa16.25■□□□□ 0.19
HPS3-201ENST00000296051 IDI1Q13907 227 aa16.25■□□□□ 0.19
HPS3-201ENST00000296051 RTEL1-TNFRSF6BF6WH68 1400 aa16.25■□□□□ 0.19
HPS3-201ENST00000296051 SSFA2P28290 1259 aa16.25■□□□□ 0.19
HPS3-201ENST00000296051 SSH1Q8WYL5 1049 aa16.25■□□□□ 0.19
HPS3-201ENST00000296051 PPP6R1Q9UPN7 881 aa16.25■□□□□ 0.19
HPS3-201ENST00000296051 EPRSP07814 1512 aaKnown RBP16.25■□□□□ 0.19
HPS3-201ENST00000296051 GAS2L2Q8NHY3 880 aa16.25■□□□□ 0.19
HPS3-201ENST00000296051 AMOTL2Q9Y2J4 779 aa16.25■□□□□ 0.19
HPS3-201ENST00000296051 SUPT6HQ7KZ85 1726 aaKnown RBP16.25■□□□□ 0.19
HPS3-201ENST00000296051 RRS1Q15050 365 aaKnown RBP16.24■□□□□ 0.19
HPS3-201ENST00000296051 ZMYND15Q9H091 742 aa16.24■□□□□ 0.19
HPS3-201ENST00000296051 DMRT2Q9Y5R5 561 aa16.24■□□□□ 0.19
HPS3-201ENST00000296051 ARHGEF11O15085 1522 aa16.24■□□□□ 0.19
HPS3-201ENST00000296051 DISP3Q9P2K9 1392 aa16.24■□□□□ 0.19
HPS3-201ENST00000296051 UBAP1LF5GYI3 381 aa16.24■□□□□ 0.19
HPS3-201ENST00000296051 AMOTL1Q8IY63 956 aa16.24■□□□□ 0.19
HPS3-201ENST00000296051 LRPPRCP42704 1394 aaKnown RBP16.23■□□□□ 0.19
HPS3-201ENST00000296051 DHX16O60231 1041 aaKnown RBP16.23■□□□□ 0.19
HPS3-201ENST00000296051 NUDT16Q96DE0 195 aaKnown RBP16.23■□□□□ 0.19
HPS3-201ENST00000296051 UQCRHLA0A096LP55 91 aa16.23■□□□□ 0.19
HPS3-201ENST00000296051 UQCRHP07919 91 aa16.23■□□□□ 0.19
HPS3-201ENST00000296051 TBC1D32Q96NH3 1257 aa16.23■□□□□ 0.19
HPS3-201ENST00000296051 RRAGDQ9NQL2 400 aaPredicted RBP16.23■□□□□ 0.19
HPS3-201ENST00000296051 SPINK5Q9NQ38 1064 aaPredicted RBP16.22■□□□□ 0.19
HPS3-201ENST00000296051 HSPA2P54652 639 aa16.22■□□□□ 0.19
HPS3-201ENST00000296051 PRDM10Q9NQV6 1147 aa16.22■□□□□ 0.19
HPS3-201ENST00000296051 DIAPH3Q9NSV4 1193 aa16.22■□□□□ 0.19
HPS3-201ENST00000296051 DHX29Q7Z478 1369 aaKnown RBP16.22■□□□□ 0.19
HPS3-201ENST00000296051 SPC24Q8NBT2 197 aa16.22■□□□□ 0.19
HPS3-201ENST00000296051 FIBPO43427 364 aa16.21■□□□□ 0.19
HPS3-201ENST00000296051 WDR63Q8IWG1 891 aa16.21■□□□□ 0.19
HPS3-201ENST00000296051 LAMC3Q9Y6N6 1575 aa16.21■□□□□ 0.19
HPS3-201ENST00000296051 ZSCAN30Q86W11 494 aa16.21■□□□□ 0.19
HPS3-201ENST00000296051 SYCE3A1L190 88 aa16.21■□□□□ 0.19
HPS3-201ENST00000296051 FOSBP53539 338 aa16.21■□□□□ 0.19
HPS3-201ENST00000296051 CCDC39Q9UFE4 941 aa16.21■□□□□ 0.19
HPS3-201ENST00000296051 IFT57Q9NWB7 429 aa16.21■□□□□ 0.18
HPS3-201ENST00000296051 ROCK1Q13464 1354 aa16.2■□□□□ 0.18
HPS3-201ENST00000296051 RABEP1Q15276 862 aa16.2■□□□□ 0.18
HPS3-201ENST00000296051 CWC22Q9HCG8 908 aaKnown RBP16.2■□□□□ 0.18
HPS3-201ENST00000296051 FYB1O15117 783 aa16.2■□□□□ 0.18
HPS3-201ENST00000296051 TWISTNBQ3B726 338 aaPredicted RBP16.2■□□□□ 0.18
HPS3-201ENST00000296051 BECN2A8MW95 431 aa16.2■□□□□ 0.18
HPS3-201ENST00000296051 LRRFIP1Q32MZ4 808 aaKnown RBP16.2■□□□□ 0.18
HPS3-201ENST00000296051 SMC3Q9UQE7 1217 aa16.2■□□□□ 0.18
HPS3-201ENST00000296051 ADGRL1O94910 1474 aa16.19■□□□□ 0.18
HPS3-201ENST00000296051 NKTRP30414 1462 aaKnown RBP16.19■□□□□ 0.18
HPS3-201ENST00000296051 GOLGA6L19H0YKK7 550 aa16.19■□□□□ 0.18
HPS3-201ENST00000296051 TNNT3P45378 269 aaPredicted RBP16.19■□□□□ 0.18
HPS3-201ENST00000296051 SPG7Q9UQ90 795 aa16.19■□□□□ 0.18
HPS3-201ENST00000296051 ATP6V1DQ9Y5K8 247 aa16.19■□□□□ 0.18
HPS3-201ENST00000296051 GRIN2AQ12879 1464 aa16.18■□□□□ 0.18
HPS3-201ENST00000296051 AKAP17AQ02040 695 aaKnown RBP16.18■□□□□ 0.18
HPS3-201ENST00000296051 KIF6Q6ZMV9 814 aa16.18■□□□□ 0.18
HPS3-201ENST00000296051 PTCD1O75127 700 aaKnown RBP16.18■□□□□ 0.18
HPS3-201ENST00000296051 TRIM27P14373 513 aa16.18■□□□□ 0.18
HPS3-201ENST00000296051 BICDL1Q6ZP65 573 aa16.18■□□□□ 0.18
HPS3-201ENST00000296051 BICD2Q8TD16 824 aa16.18■□□□□ 0.18
HPS3-201ENST00000296051 PLEKHH1Q9ULM0 1364 aa16.18■□□□□ 0.18
HPS3-201ENST00000296051 RPGRIP1LQ68CZ1 1315 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms