RNA–Protein interactions for RNA: ENST00000289488.6

LRTOMT-201, Transcript of leucine rich transmembrane and O-methyltransferase domain containing, humanhuman

TSL 1 (best) BASIC

Gene LRTOMT, Length 2,332 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRTOMT-201ENST00000289488 MON2Q7Z3U7 1717 aa12.98□□□□□ -0.33
LRTOMT-201ENST00000289488 PPP2R1AP30153 589 aa12.97□□□□□ -0.33
LRTOMT-201ENST00000289488 AEBP2Q6ZN18 517 aaPredicted RBP12.97□□□□□ -0.33
LRTOMT-201ENST00000289488 NPC1L1Q9UHC9 1359 aa12.97□□□□□ -0.33
LRTOMT-201ENST00000289488 XPCQ01831 940 aaPredicted RBP12.96□□□□□ -0.33
LRTOMT-201ENST00000289488 MORC1Q86VD1 984 aa12.96□□□□□ -0.33
LRTOMT-201ENST00000289488 FAM9BQ8IZU0 186 aa12.96□□□□□ -0.33
LRTOMT-201ENST00000289488 ANKARQ7Z5J8 1434 aa12.96□□□□□ -0.33
LRTOMT-201ENST00000289488 ATF3P18847 181 aa12.96□□□□□ -0.34
LRTOMT-201ENST00000289488 ERICH6BQ5W0A0 696 aa12.96□□□□□ -0.34
LRTOMT-201ENST00000289488 KIF20BQ96Q89 1820 aa12.96□□□□□ -0.34
LRTOMT-201ENST00000289488 SENP3-EIF4A1A0A087X0R7 540 aa12.95□□□□□ -0.34
LRTOMT-201ENST00000289488 FOXO3O43524 673 aa12.95□□□□□ -0.34
LRTOMT-201ENST00000289488 DDX17Q92841 729 aaKnown RBP12.95□□□□□ -0.34
LRTOMT-201ENST00000289488 PHF8Q9UPP1 1060 aa12.95□□□□□ -0.34
LRTOMT-201ENST00000289488 USP6P35125 1406 aa12.95□□□□□ -0.34
LRTOMT-201ENST00000289488 EDC4Q6P2E9 1401 aaKnown RBP12.95□□□□□ -0.34
LRTOMT-201ENST00000289488 PRKCSHP14314 528 aaPredicted RBP12.95□□□□□ -0.34
LRTOMT-201ENST00000289488 NLRP13Q86W25 1043 aa12.95□□□□□ -0.34
LRTOMT-201ENST00000289488 POLR3AO14802 1390 aaPredicted RBP12.95□□□□□ -0.34
LRTOMT-201ENST00000289488 ZNF692Q9BU19 519 aaPredicted RBP12.94□□□□□ -0.34
LRTOMT-201ENST00000289488 MSH6P52701 1360 aa12.94□□□□□ -0.34
LRTOMT-201ENST00000289488 C1orf167Q5SNV9 1468 aa12.94□□□□□ -0.34
LRTOMT-201ENST00000289488 NRKQ7Z2Y5 1582 aa12.94□□□□□ -0.34
LRTOMT-201ENST00000289488 MST1RQ04912 1400 aa12.93□□□□□ -0.34
LRTOMT-201ENST00000289488 TTC21BQ7Z4L5 1316 aa12.93□□□□□ -0.34
LRTOMT-201ENST00000289488 NUTM2GQ5VZR2 741 aa12.93□□□□□ -0.34
LRTOMT-201ENST00000289488 PAK3O75914 559 aaPredicted RBP12.93□□□□□ -0.34
LRTOMT-201ENST00000289488 DEKP35659 375 aaKnown RBP12.92□□□□□ -0.34
LRTOMT-201ENST00000289488 ANKRD26Q9UPS8 1709 aa12.92□□□□□ -0.34
LRTOMT-201ENST00000289488 SOX12O15370 315 aa12.91□□□□□ -0.34
LRTOMT-201ENST00000289488 CADPS2Q86UW7 1296 aa12.91□□□□□ -0.34
LRTOMT-201ENST00000289488 SSH2Q76I76 1423 aa12.91□□□□□ -0.34
LRTOMT-201ENST00000289488 BRD4O60885 1362 aaPredicted RBP12.91□□□□□ -0.34
LRTOMT-201ENST00000289488 NCOA3Q9Y6Q9 1424 aa12.91□□□□□ -0.34
LRTOMT-201ENST00000289488 PLEKHG5O94827 1062 aa12.91□□□□□ -0.34
LRTOMT-201ENST00000289488 PNISRQ8TF01 805 aaKnown RBP12.91□□□□□ -0.34
LRTOMT-201ENST00000289488 PSME1Q06323 249 aa12.9□□□□□ -0.34
LRTOMT-201ENST00000289488 NSD2O96028 1365 aa12.9□□□□□ -0.34
LRTOMT-201ENST00000289488 MAP2P11137 1827 aaKnown RBP12.9□□□□□ -0.34
LRTOMT-201ENST00000289488 DCCP43146 1447 aa12.9□□□□□ -0.34
LRTOMT-201ENST00000289488 MTHFSP49914 203 aa12.9□□□□□ -0.34
LRTOMT-201ENST00000289488 HNRNPUQ00839 825 aaKnown RBP eCLIP12.89□□□□□ -0.35
LRTOMT-201ENST00000289488 PPP4R2Q9NY27 417 aa12.89□□□□□ -0.35
LRTOMT-201ENST00000289488 LTBP4Q8N2S1 1624 aa12.89□□□□□ -0.35
LRTOMT-201ENST00000289488 PIK3C2AO00443 1686 aa12.89□□□□□ -0.35
LRTOMT-201ENST00000289488 SLAIN2Q9P270 581 aa12.89□□□□□ -0.35
LRTOMT-201ENST00000289488 PPM1GO15355 546 aaPredicted RBP12.88□□□□□ -0.35
LRTOMT-201ENST00000289488 RRS1Q15050 365 aaKnown RBP12.88□□□□□ -0.35
LRTOMT-201ENST00000289488 COG3Q96JB2 828 aa12.88□□□□□ -0.35
LRTOMT-201ENST00000289488 IRX6P78412 446 aaPredicted RBP12.88□□□□□ -0.35
LRTOMT-201ENST00000289488 ABTB2Q8N961 1025 aa12.88□□□□□ -0.35
LRTOMT-201ENST00000289488 NLRP6P59044 892 aa12.87□□□□□ -0.35
LRTOMT-201ENST00000289488 LMOD2Q6P5Q4 547 aa12.87□□□□□ -0.35
LRTOMT-201ENST00000289488 BRINP3Q76B58 766 aa12.87□□□□□ -0.35
LRTOMT-201ENST00000289488 EMILIN1Q9Y6C2 1016 aa12.87□□□□□ -0.35
LRTOMT-201ENST00000289488 OVOS2A0A0J9YW53 1432 aa12.86□□□□□ -0.35
LRTOMT-201ENST00000289488 OVOS2Q6IE36 1432 aa12.86□□□□□ -0.35
LRTOMT-201ENST00000289488 POLKQ9UBT6 870 aa12.85□□□□□ -0.35
LRTOMT-201ENST00000289488 MARF1Q9Y4F3 1742 aaKnown RBP12.85□□□□□ -0.35
LRTOMT-201ENST00000289488 TTC21AQ8NDW8 1320 aa12.85□□□□□ -0.35
LRTOMT-201ENST00000289488 KRT28Q7Z3Y7 464 aa12.85□□□□□ -0.35
LRTOMT-201ENST00000289488 ADAMTS8Q9UP79 889 aa12.84□□□□□ -0.35
LRTOMT-201ENST00000289488 KIF1AQ12756 1690 aa12.84□□□□□ -0.35
LRTOMT-201ENST00000289488 TRPM3Q9HCF6 1732 aaPredicted RBP12.83□□□□□ -0.36
LRTOMT-201ENST00000289488 NOP58Q9Y2X3 529 aaKnown RBP12.83□□□□□ -0.36
LRTOMT-201ENST00000289488 SHPRHQ149N8 1683 aa12.82□□□□□ -0.36
LRTOMT-201ENST00000289488 SALL2Q9Y467 1007 aaPredicted RBP12.8□□□□□ -0.36
LRTOMT-201ENST00000289488 NPHP3Q7Z494 1330 aa12.8□□□□□ -0.36
LRTOMT-201ENST00000289488 WDR43Q15061 677 aaKnown RBP eCLIP12.8□□□□□ -0.36
LRTOMT-201ENST00000289488 CCDC146Q8IYE0 955 aa12.8□□□□□ -0.36
LRTOMT-201ENST00000289488 PXDNQ92626 1479 aa12.8□□□□□ -0.36
LRTOMT-201ENST00000289488 USP31Q70CQ4 1352 aa12.79□□□□□ -0.36
LRTOMT-201ENST00000289488 CABLES1Q8TDN4 633 aa12.79□□□□□ -0.36
LRTOMT-201ENST00000289488 PEAK1Q9H792 1746 aa12.79□□□□□ -0.36
LRTOMT-201ENST00000289488 MAP3K19Q56UN5 1328 aa12.79□□□□□ -0.36
LRTOMT-201ENST00000289488 ALS2Q96Q42 1657 aa12.79□□□□□ -0.36
LRTOMT-201ENST00000289488 COL3A1P02461 1466 aaPredicted RBP12.78□□□□□ -0.36
LRTOMT-201ENST00000289488 AATKQ6ZMQ8 1374 aa12.78□□□□□ -0.36
LRTOMT-201ENST00000289488 HSP90AB2PQ58FF8 381 aa12.78□□□□□ -0.36
LRTOMT-201ENST00000289488 ROBO1Q9Y6N7 1651 aa12.78□□□□□ -0.36
LRTOMT-201ENST00000289488 ZBTB7CA1YPR0 619 aa12.78□□□□□ -0.36
LRTOMT-201ENST00000289488 U2SURPO15042 1029 aaKnown RBP12.78□□□□□ -0.36
LRTOMT-201ENST00000289488 CFAP53Q96M91 514 aa12.78□□□□□ -0.36
LRTOMT-201ENST00000289488 PNPLA6Q8IY17 1366 aa12.77□□□□□ -0.36
LRTOMT-201ENST00000289488 PIP4K2BP78356 416 aa12.77□□□□□ -0.36
LRTOMT-201ENST00000289488 LTN1O94822 1766 aa12.77□□□□□ -0.37
LRTOMT-201ENST00000289488 U2AF1L5P0DN76 240 aaPredicted RBP12.76□□□□□ -0.37
LRTOMT-201ENST00000289488 U2AF1Q01081 240 aaKnown RBP eCLIP12.76□□□□□ -0.37
LRTOMT-201ENST00000289488 USP54Q70EL1 1684 aa12.76□□□□□ -0.37
LRTOMT-201ENST00000289488 DIAPH1O60610 1272 aaKnown RBP12.76□□□□□ -0.37
LRTOMT-201ENST00000289488 GCP02774 474 aa12.76□□□□□ -0.37
LRTOMT-201ENST00000289488 SMG6Q86US8 1419 aaKnown RBP12.75□□□□□ -0.37
LRTOMT-201ENST00000289488 B4GALNT3Q6L9W6 998 aa12.75□□□□□ -0.37
LRTOMT-201ENST00000289488 MED1Q15648 1581 aaPredicted RBP12.75□□□□□ -0.37
LRTOMT-201ENST00000289488 SOS2Q07890 1332 aaPredicted RBP12.75□□□□□ -0.37
LRTOMT-201ENST00000289488 SPATA31A3Q5VYP0 1347 aa12.75□□□□□ -0.37
LRTOMT-201ENST00000289488 TNS3Q68CZ2 1445 aa12.75□□□□□ -0.37
LRTOMT-201ENST00000289488 CDK12Q9NYV4 1490 aaPredicted RBP12.75□□□□□ -0.37
LRTOMT-201ENST00000289488 NFAT5O94916 1531 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms