RNA–Protein interactions for RNA: ENST00000289448.2

HMHB1-201, Transcript of histocompatibility minor HB-1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene HMHB1, Length 384 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMHB1-201ENST00000289448 POLR3AO14802 1390 aaPredicted RBP13.75□□□□□ -0.21
HMHB1-201ENST00000289448 ACEP12821 1306 aa13.75□□□□□ -0.21
HMHB1-201ENST00000289448 NBPF8Q3BBV2 869 aa13.75□□□□□ -0.21
HMHB1-201ENST00000289448 NUTM2GQ5VZR2 741 aa13.74□□□□□ -0.21
HMHB1-201ENST00000289448 CABP2Q9NPB3 220 aa13.74□□□□□ -0.21
HMHB1-201ENST00000289448 PLCH1Q4KWH8 1693 aa13.73□□□□□ -0.21
HMHB1-201ENST00000289448 SRPK2P78362 688 aaKnown RBP13.73□□□□□ -0.21
HMHB1-201ENST00000289448 BTG4Q9NY30 223 aa13.73□□□□□ -0.21
HMHB1-201ENST00000289448 TOPAZ1Q8N9V7 1692 aa13.72□□□□□ -0.21
HMHB1-201ENST00000289448 ONECUT3O60422 494 aaPredicted RBP13.72□□□□□ -0.21
HMHB1-201ENST00000289448 SEPT12Q8IYM1 358 aa13.72□□□□□ -0.21
HMHB1-201ENST00000289448 ITSN1Q15811 1721 aa13.71□□□□□ -0.21
HMHB1-201ENST00000289448 NWD2Q9ULI1 1742 aa13.71□□□□□ -0.21
HMHB1-201ENST00000289448 CRYBG1Q9Y4K1 1723 aa13.71□□□□□ -0.21
HMHB1-201ENST00000289448 CCDC9Q9Y3X0 531 aaKnown RBP13.71□□□□□ -0.21
HMHB1-201ENST00000289448 TRPM1Q7Z4N2 1603 aa13.7□□□□□ -0.22
HMHB1-201ENST00000289448 PPIP5K1Q6PFW1 1433 aa13.7□□□□□ -0.22
HMHB1-201ENST00000289448 ROCK2O75116 1388 aaKnown RBP13.7□□□□□ -0.22
HMHB1-201ENST00000289448 KIAA0232Q92628 1395 aa13.7□□□□□ -0.22
HMHB1-201ENST00000289448 ZC3H6P61129 1189 aaKnown RBP13.69□□□□□ -0.22
HMHB1-201ENST00000289448 CHRNA2Q15822 529 aa13.69□□□□□ -0.22
HMHB1-201ENST00000289448 PRDM11Q9NQV5 511 aa13.69□□□□□ -0.22
HMHB1-201ENST00000289448 CABP1Q9NZU7 370 aa13.69□□□□□ -0.22
HMHB1-201ENST00000289448 QRICH2Q9H0J4 1663 aa13.69□□□□□ -0.22
HMHB1-201ENST00000289448 NRAPQ86VF7 1730 aa13.68□□□□□ -0.22
HMHB1-201ENST00000289448 FAM98CQ17RN3 349 aaKnown RBP13.68□□□□□ -0.22
HMHB1-201ENST00000289448 COL14A1Q05707 1796 aaKnown RBP13.68□□□□□ -0.22
HMHB1-201ENST00000289448 SPATA31A5Q5VU36 1347 aa13.67□□□□□ -0.22
HMHB1-201ENST00000289448 SPATA31A7Q8IWB4 1347 aa13.67□□□□□ -0.22
HMHB1-201ENST00000289448 BRWD3Q6RI45 1802 aa13.67□□□□□ -0.22
HMHB1-201ENST00000289448 ABTB2Q8N961 1025 aa13.67□□□□□ -0.22
HMHB1-201ENST00000289448 CCDC125Q86Z20 511 aa13.66□□□□□ -0.22
HMHB1-201ENST00000289448 USP19O94966 1318 aa13.65□□□□□ -0.22
HMHB1-201ENST00000289448 EVC2Q86UK5 1308 aa13.65□□□□□ -0.22
HMHB1-201ENST00000289448 KRT27Q7Z3Y8 459 aa13.65□□□□□ -0.22
HMHB1-201ENST00000289448 PHRF1Q9P1Y6 1649 aaKnown RBP13.64□□□□□ -0.23
HMHB1-201ENST00000289448 TRIM26Q12899 539 aaPredicted RBP13.64□□□□□ -0.23
HMHB1-201ENST00000289448 USP6P35125 1406 aa13.64□□□□□ -0.23
HMHB1-201ENST00000289448 SSH2Q76I76 1423 aa13.64□□□□□ -0.23
HMHB1-201ENST00000289448 A0A0G2JS52 829 aa13.63□□□□□ -0.23
HMHB1-201ENST00000289448 GCP02774 474 aa13.63□□□□□ -0.23
HMHB1-201ENST00000289448 MYT1Q01538 1121 aa13.63□□□□□ -0.23
HMHB1-201ENST00000289448 STRN4Q9NRL3 753 aa13.63□□□□□ -0.23
HMHB1-201ENST00000289448 BLMP54132 1417 aaPredicted RBP13.63□□□□□ -0.23
HMHB1-201ENST00000289448 SPATA31A1Q5TZJ5 1347 aa13.63□□□□□ -0.23
HMHB1-201ENST00000289448 CPDO75976 1380 aa13.62□□□□□ -0.23
HMHB1-201ENST00000289448 FAM182BQ5T319 152 aa13.62□□□□□ -0.23
HMHB1-201ENST00000289448 DEFB132Q7Z7B7 95 aa13.62□□□□□ -0.23
HMHB1-201ENST00000289448 NLRP13Q86W25 1043 aa13.62□□□□□ -0.23
HMHB1-201ENST00000289448 CARD11Q9BXL7 1154 aa13.62□□□□□ -0.23
HMHB1-201ENST00000289448 NRKQ7Z2Y5 1582 aa13.62□□□□□ -0.23
HMHB1-201ENST00000289448 BRD4O60885 1362 aaPredicted RBP13.61□□□□□ -0.23
HMHB1-201ENST00000289448 CAMTA1Q9Y6Y1 1673 aa13.61□□□□□ -0.23
HMHB1-201ENST00000289448 TONSLQ96HA7 1378 aa13.6□□□□□ -0.23
HMHB1-201ENST00000289448 NLRP6P59044 892 aa13.6□□□□□ -0.23
HMHB1-201ENST00000289448 LARP1Q6PKG0 1096 aaKnown RBP13.6□□□□□ -0.23
HMHB1-201ENST00000289448 EVA1CP58658 441 aa13.59□□□□□ -0.23
HMHB1-201ENST00000289448 USP35Q9P2H5 1018 aa13.59□□□□□ -0.23
HMHB1-201ENST00000289448 THSD7AQ9UPZ6 1657 aa13.59□□□□□ -0.23
HMHB1-201ENST00000289448 TTC21BQ7Z4L5 1316 aa13.59□□□□□ -0.23
HMHB1-201ENST00000289448 ZNF692Q9BU19 519 aaPredicted RBP13.58□□□□□ -0.24
HMHB1-201ENST00000289448 LMO7Q8WWI1 1683 aa13.58□□□□□ -0.24
HMHB1-201ENST00000289448 SBNO2Q9Y2G9 1366 aa13.58□□□□□ -0.24
HMHB1-201ENST00000289448 CPSF1Q10570 1443 aaKnown RBP13.57□□□□□ -0.24
HMHB1-201ENST00000289448 ZRANB1Q9UGI0 708 aa13.57□□□□□ -0.24
HMHB1-201ENST00000289448 SLIT3O75094 1523 aa13.57□□□□□ -0.24
HMHB1-201ENST00000289448 PIK3C2AO00443 1686 aa13.56□□□□□ -0.24
HMHB1-201ENST00000289448 ZBTB7CA1YPR0 619 aa13.56□□□□□ -0.24
HMHB1-201ENST00000289448 SF3B2Q13435 895 aaKnown RBP13.56□□□□□ -0.24
HMHB1-201ENST00000289448 BARGINQ6ZT62 677 aa13.56□□□□□ -0.24
HMHB1-201ENST00000289448 TCP11L2Q8N4U5 519 aa13.55□□□□□ -0.24
HMHB1-201ENST00000289448 AXIN2Q9Y2T1 843 aa13.55□□□□□ -0.24
HMHB1-201ENST00000289448 AATKQ6ZMQ8 1374 aa13.55□□□□□ -0.24
HMHB1-201ENST00000289448 KTN1Q86UP2 1357 aaKnown RBP13.55□□□□□ -0.24
HMHB1-201ENST00000289448 COL5A2P05997 1499 aaPredicted RBP13.55□□□□□ -0.24
HMHB1-201ENST00000289448 CD163L1Q9NR16 1453 aa13.55□□□□□ -0.24
HMHB1-201ENST00000289448 SLC12A5Q9H2X9 1139 aa13.54□□□□□ -0.24
HMHB1-201ENST00000289448 SOX12O15370 315 aa13.53□□□□□ -0.24
HMHB1-201ENST00000289448 ARHGEF25Q86VW2 580 aa13.53□□□□□ -0.24
HMHB1-201ENST00000289448 TESK2Q96S53 571 aa13.53□□□□□ -0.24
HMHB1-201ENST00000289448 TTC21AQ8NDW8 1320 aa13.53□□□□□ -0.24
HMHB1-201ENST00000289448 AKAP12Q02952 1782 aa13.53□□□□□ -0.24
HMHB1-201ENST00000289448 ST20-MTHFSA0A0A6YYL1 179 aa13.52□□□□□ -0.25
HMHB1-201ENST00000289448 EN1Q05925 392 aaPredicted RBP13.52□□□□□ -0.25
HMHB1-201ENST00000289448 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.52□□□□□ -0.25
HMHB1-201ENST00000289448 TMC1Q8TDI8 760 aa13.52□□□□□ -0.25
HMHB1-201ENST00000289448 COL18A1P39060 1754 aa13.51□□□□□ -0.25
HMHB1-201ENST00000289448 TRIM37O94972 964 aa13.51□□□□□ -0.25
HMHB1-201ENST00000289448 BAG6P46379 1132 aa13.51□□□□□ -0.25
HMHB1-201ENST00000289448 NME9Q86XW9 330 aa13.51□□□□□ -0.25
HMHB1-201ENST00000289448 THRAP3Q9Y2W1 955 aaKnown RBP13.51□□□□□ -0.25
HMHB1-201ENST00000289448 CRB1P82279 1406 aa13.5□□□□□ -0.25
HMHB1-201ENST00000289448 FAM196AQ6ZSG2 479 aa13.5□□□□□ -0.25
HMHB1-201ENST00000289448 KCNH5Q8NCM2 988 aa13.5□□□□□ -0.25
HMHB1-201ENST00000289448 NFAT5O94916 1531 aa13.49□□□□□ -0.25
HMHB1-201ENST00000289448 PDE3BQ13370 1112 aa13.49□□□□□ -0.25
HMHB1-201ENST00000289448 PUS7Q96PZ0 661 aaKnown RBP13.49□□□□□ -0.25
HMHB1-201ENST00000289448 DISP2A7MBM2 1401 aa13.48□□□□□ -0.25
HMHB1-201ENST00000289448 USP31Q70CQ4 1352 aa13.48□□□□□ -0.25
HMHB1-201ENST00000289448 MON2Q7Z3U7 1717 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms