RNA–Protein interactions for RNA: ENST00000289416.9

ACSM3-201, Transcript of acyl-CoA synthetase medium chain family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ACSM3, Length 2,845 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACSM3-201ENST00000289416 CFAP70Q5T0N1 1121 aa5.74□□□□□ -1.49
ACSM3-201ENST00000289416 ASXL1Q8IXJ9 1541 aa5.74□□□□□ -1.49
ACSM3-201ENST00000289416 KNDC1Q76NI1 1749 aa5.74□□□□□ -1.49
ACSM3-201ENST00000289416 LRPPRCP42704 1394 aaKnown RBP5.73□□□□□ -1.49
ACSM3-201ENST00000289416 PLEKHG3A1L390 1219 aa5.73□□□□□ -1.49
ACSM3-201ENST00000289416 TSPYL2Q9H2G4 693 aaPredicted RBP5.73□□□□□ -1.49
ACSM3-201ENST00000289416 DLC1Q96QB1 1528 aa5.73□□□□□ -1.49
ACSM3-201ENST00000289416 ZBTB7CA1YPR0 619 aa5.73□□□□□ -1.49
ACSM3-201ENST00000289416 CARD11Q9BXL7 1154 aa5.73□□□□□ -1.49
ACSM3-201ENST00000289416 TECPR2O15040 1411 aa5.73□□□□□ -1.49
ACSM3-201ENST00000289416 YTHDC2Q9H6S0 1430 aaKnown RBP5.73□□□□□ -1.49
ACSM3-201ENST00000289416 NWD1Q149M9 1564 aa5.73□□□□□ -1.49
ACSM3-201ENST00000289416 EIF3AQ14152 1382 aaKnown RBP5.73□□□□□ -1.49
ACSM3-201ENST00000289416 ABCC11Q96J66 1382 aa5.73□□□□□ -1.49
ACSM3-201ENST00000289416 NBPF1Q3BBV0 1214 aa5.72□□□□□ -1.49
ACSM3-201ENST00000289416 GPIHBP1Q8IV16 184 aa5.72□□□□□ -1.49
ACSM3-201ENST00000289416 SIRT1Q96EB6 747 aa5.72□□□□□ -1.49
ACSM3-201ENST00000289416 CCDC9Q9Y3X0 531 aaKnown RBP5.72□□□□□ -1.49
ACSM3-201ENST00000289416 XRN1Q8IZH2 1706 aaKnown RBP5.72□□□□□ -1.49
ACSM3-201ENST00000289416 METP08581 1390 aa5.72□□□□□ -1.49
ACSM3-201ENST00000289416 CPS1P31327 1500 aa5.72□□□□□ -1.49
ACSM3-201ENST00000289416 CHD2O14647 1828 aaKnown RBP5.72□□□□□ -1.49
ACSM3-201ENST00000289416 PHF8Q9UPP1 1060 aa5.72□□□□□ -1.49
ACSM3-201ENST00000289416 PTCH1Q13635 1447 aa5.71□□□□□ -1.49
ACSM3-201ENST00000289416 CHRDL2Q6WN34 429 aa5.71□□□□□ -1.49
ACSM3-201ENST00000289416 SLC26A8Q96RN1 970 aa5.71□□□□□ -1.49
ACSM3-201ENST00000289416 NKTRP30414 1462 aaKnown RBP5.71□□□□□ -1.5
ACSM3-201ENST00000289416 ARHGEF28Q8N1W1 1705 aaKnown RBP5.71□□□□□ -1.5
ACSM3-201ENST00000289416 FAM135BQ49AJ0 1406 aa5.71□□□□□ -1.5
ACSM3-201ENST00000289416 EIF4G2P78344 907 aaKnown RBP eCLIP5.71□□□□□ -1.5
ACSM3-201ENST00000289416 USP47Q96K76 1375 aa5.71□□□□□ -1.5
ACSM3-201ENST00000289416 PTPRUQ92729 1446 aa5.71□□□□□ -1.5
ACSM3-201ENST00000289416 KCNA6P17658 529 aa5.7□□□□□ -1.5
ACSM3-201ENST00000289416 LHX8Q68G74 356 aa5.7□□□□□ -1.5
ACSM3-201ENST00000289416 TMEM132EQ6IEE7 984 aa5.7□□□□□ -1.5
ACSM3-201ENST00000289416 AEBP1Q8IUX7 1158 aa5.7□□□□□ -1.5
ACSM3-201ENST00000289416 EFCAB3Q8N7B9 438 aa5.7□□□□□ -1.5
ACSM3-201ENST00000289416 SBNO2Q9Y2G9 1366 aa5.7□□□□□ -1.5
ACSM3-201ENST00000289416 KCTD17Q8N5Z5 321 aa5.7□□□□□ -1.5
ACSM3-201ENST00000289416 AMOTL2Q9Y2J4 779 aa5.7□□□□□ -1.5
ACSM3-201ENST00000289416 NCOA3Q9Y6Q9 1424 aa5.69□□□□□ -1.5
ACSM3-201ENST00000289416 CENPJQ9HC77 1338 aaPredicted RBP5.69□□□□□ -1.5
ACSM3-201ENST00000289416 PRR29P0C7W0 189 aa5.69□□□□□ -1.5
ACSM3-201ENST00000289416 HSPA5P11021 654 aaKnown RBP5.69□□□□□ -1.5
ACSM3-201ENST00000289416 TRAK1Q9UPV9 953 aa5.69□□□□□ -1.5
ACSM3-201ENST00000289416 QRICH2Q9H0J4 1663 aa5.69□□□□□ -1.5
ACSM3-201ENST00000289416 MYT1Q01538 1121 aa5.68□□□□□ -1.5
ACSM3-201ENST00000289416 FBXO22Q8NEZ5 403 aa5.68□□□□□ -1.5
ACSM3-201ENST00000289416 STK26Q9P289 416 aa5.68□□□□□ -1.5
ACSM3-201ENST00000289416 ROBO2Q9HCK4 1378 aa5.68□□□□□ -1.5
ACSM3-201ENST00000289416 ADGRB2O60241 1585 aa5.68□□□□□ -1.5
ACSM3-201ENST00000289416 POGKQ9P215 609 aa5.68□□□□□ -1.5
ACSM3-201ENST00000289416 IGSF3O75054 1194 aa5.67□□□□□ -1.5
ACSM3-201ENST00000289416 FOXD4L5Q5VV16 416 aaPredicted RBP5.67□□□□□ -1.5
ACSM3-201ENST00000289416 FOXD4L4Q8WXT5 416 aaPredicted RBP5.67□□□□□ -1.5
ACSM3-201ENST00000289416 PRAM1Q96QH2 718 aa5.67□□□□□ -1.5
ACSM3-201ENST00000289416 CABP2Q9NPB3 220 aa5.67□□□□□ -1.5
ACSM3-201ENST00000289416 STRCP1A6NGW2 1772 aa5.67□□□□□ -1.5
ACSM3-201ENST00000289416 ST20-MTHFSA0A0A6YYL1 179 aa5.67□□□□□ -1.5
ACSM3-201ENST00000289416 RAD21O60216 631 aa5.67□□□□□ -1.5
ACSM3-201ENST00000289416 ONECUT3O60422 494 aaPredicted RBP5.66□□□□□ -1.5
ACSM3-201ENST00000289416 PDAP1Q13442 181 aaKnown RBP5.66□□□□□ -1.5
ACSM3-201ENST00000289416 ADGRL3Q9HAR2 1447 aa5.66□□□□□ -1.5
ACSM3-201ENST00000289416 PSEN1P49768 467 aa5.66□□□□□ -1.5
ACSM3-201ENST00000289416 TMF1P82094 1093 aa5.66□□□□□ -1.5
ACSM3-201ENST00000289416 CDCA8Q53HL2 280 aa5.66□□□□□ -1.5
ACSM3-201ENST00000289416 PROSER2Q86WR7 435 aaPredicted RBP5.66□□□□□ -1.5
ACSM3-201ENST00000289416 POM121Q96HA1 1249 aa5.66□□□□□ -1.5
ACSM3-201ENST00000289416 PUS7Q96PZ0 661 aaKnown RBP5.66□□□□□ -1.5
ACSM3-201ENST00000289416 TESK2Q96S53 571 aa5.66□□□□□ -1.5
ACSM3-201ENST00000289416 ZNF335Q9H4Z2 1342 aaPredicted RBP5.66□□□□□ -1.5
ACSM3-201ENST00000289416 PLEKHH1Q9ULM0 1364 aa5.66□□□□□ -1.5
ACSM3-201ENST00000289416 CDC42BPGQ6DT37 1551 aa5.66□□□□□ -1.5
ACSM3-201ENST00000289416 SMYD5Q6GMV2 418 aa5.66□□□□□ -1.5
ACSM3-201ENST00000289416 SIPA1L2Q9P2F8 1722 aaPredicted RBP5.65□□□□□ -1.5
ACSM3-201ENST00000289416 DCCP43146 1447 aa5.65□□□□□ -1.5
ACSM3-201ENST00000289416 LRRC7Q96NW7 1537 aa5.65□□□□□ -1.5
ACSM3-201ENST00000289416 LTBP4Q8N2S1 1624 aa5.65□□□□□ -1.5
ACSM3-201ENST00000289416 NALCNQ8IZF0 1738 aa5.65□□□□□ -1.5
ACSM3-201ENST00000289416 WAPLQ7Z5K2 1190 aa5.65□□□□□ -1.5
ACSM3-201ENST00000289416 PCDH10Q9P2E7 1040 aa5.65□□□□□ -1.5
ACSM3-201ENST00000289416 MTMR7Q9Y216 660 aa5.65□□□□□ -1.5
ACSM3-201ENST00000289416 EVC2Q86UK5 1308 aa5.65□□□□□ -1.5
ACSM3-201ENST00000289416 TULP4Q9NRJ4 1543 aa5.65□□□□□ -1.51
ACSM3-201ENST00000289416 FECHP22830 423 aa5.65□□□□□ -1.51
ACSM3-201ENST00000289416 CHADLQ6NUI6 762 aa5.65□□□□□ -1.51
ACSM3-201ENST00000289416 PARP9Q8IXQ6 854 aa5.64□□□□□ -1.51
ACSM3-201ENST00000289416 DDX27Q96GQ7 796 aaKnown RBP5.64□□□□□ -1.51
ACSM3-201ENST00000289416 MINK1Q8N4C8 1332 aaPredicted RBP5.64□□□□□ -1.51
ACSM3-201ENST00000289416 TMEM94Q12767 1356 aa5.64□□□□□ -1.51
ACSM3-201ENST00000289416 IQSEC2Q5JU85 1478 aa5.64□□□□□ -1.51
ACSM3-201ENST00000289416 XIRP1Q702N8 1843 aaKnown RBP5.64□□□□□ -1.51
ACSM3-201ENST00000289416 FMN2Q9NZ56 1722 aa5.64□□□□□ -1.51
ACSM3-201ENST00000289416 ANKARQ7Z5J8 1434 aa5.64□□□□□ -1.51
ACSM3-201ENST00000289416 ATAD2Q6PL18 1390 aa5.64□□□□□ -1.51
ACSM3-201ENST00000289416 TRAK2O60296 914 aa5.64□□□□□ -1.51
ACSM3-201ENST00000289416 MSH6P52701 1360 aa5.63□□□□□ -1.51
ACSM3-201ENST00000289416 DISP3Q9P2K9 1392 aa5.63□□□□□ -1.51
ACSM3-201ENST00000289416 WASLO00401 505 aaPredicted RBP5.63□□□□□ -1.51
ACSM3-201ENST00000289416 SAFB2Q14151 953 aaKnown RBP eCLIP5.63□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms