RNA–Protein interactions for RNA: ENST00000288723.8

RAB28-201, Transcript of RAB28, member RAS oncogene family, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RAB28, Length 1,810 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB28-201ENST00000288723 NUTM2GQ5VZR2 741 aa28.99■■■□□ 2.23
RAB28-201ENST00000288723 TIMELESSQ9UNS1 1208 aa28.99■■■□□ 2.23
RAB28-201ENST00000288723 MARF1Q9Y4F3 1742 aaKnown RBP28.98■■■□□ 2.23
RAB28-201ENST00000288723 SBNO2Q9Y2G9 1366 aa28.96■■■□□ 2.23
RAB28-201ENST00000288723 ST20-MTHFSA0A0A6YYL1 179 aa28.96■■■□□ 2.23
RAB28-201ENST00000288723 ABCA3Q99758 1704 aa28.95■■■□□ 2.22
RAB28-201ENST00000288723 BCL9LQ86UU0 1499 aa28.95■■■□□ 2.22
RAB28-201ENST00000288723 RBM6P78332 1123 aaKnown RBP28.92■■■□□ 2.22
RAB28-201ENST00000288723 TRPC5Q9UL62 973 aaPredicted RBP28.92■■■□□ 2.22
RAB28-201ENST00000288723 ABTB2Q8N961 1025 aa28.92■■■□□ 2.22
RAB28-201ENST00000288723 FAM83GA6ND36 823 aa28.91■■■□□ 2.22
RAB28-201ENST00000288723 TESK2Q96S53 571 aa28.9■■■□□ 2.22
RAB28-201ENST00000288723 ATAD2Q6PL18 1390 aa28.9■■■□□ 2.22
RAB28-201ENST00000288723 SLIT2O94813 1529 aa28.9■■■□□ 2.22
RAB28-201ENST00000288723 ATRNO75882 1429 aa28.89■■■□□ 2.21
RAB28-201ENST00000288723 UNC5CLQ8IV45 518 aa28.88■■■□□ 2.21
RAB28-201ENST00000288723 USP6P35125 1406 aa28.88■■■□□ 2.21
RAB28-201ENST00000288723 USP47Q96K76 1375 aa28.87■■■□□ 2.21
RAB28-201ENST00000288723 CRYBG1Q9Y4K1 1723 aa28.86■■■□□ 2.21
RAB28-201ENST00000288723 TMC1Q8TDI8 760 aa28.85■■■□□ 2.21
RAB28-201ENST00000288723 ZC3H6P61129 1189 aaKnown RBP28.83■■■□□ 2.21
RAB28-201ENST00000288723 ZNF692Q9BU19 519 aaPredicted RBP28.83■■■□□ 2.21
RAB28-201ENST00000288723 RGS12O14924 1447 aa28.82■■■□□ 2.2
RAB28-201ENST00000288723 GJD4Q96KN9 370 aaPredicted RBP28.82■■■□□ 2.2
RAB28-201ENST00000288723 SLC12A5Q9H2X9 1139 aa28.82■■■□□ 2.2
RAB28-201ENST00000288723 CDK12Q9NYV4 1490 aaPredicted RBP28.82■■■□□ 2.2
RAB28-201ENST00000288723 SSH2Q76I76 1423 aa28.82■■■□□ 2.2
RAB28-201ENST00000288723 PLCH1Q4KWH8 1693 aa28.81■■■□□ 2.2
RAB28-201ENST00000288723 BTG4Q9NY30 223 aa28.81■■■□□ 2.2
RAB28-201ENST00000288723 BRD4O60885 1362 aaPredicted RBP28.81■■■□□ 2.2
RAB28-201ENST00000288723 NLRP13Q86W25 1043 aa28.8■■■□□ 2.2
RAB28-201ENST00000288723 PRDM11Q9NQV5 511 aa28.8■■■□□ 2.2
RAB28-201ENST00000288723 KIAA0232Q92628 1395 aa28.8■■■□□ 2.2
RAB28-201ENST00000288723 CPSF1Q10570 1443 aaKnown RBP28.8■■■□□ 2.2
RAB28-201ENST00000288723 CHRNA2Q15822 529 aa28.8■■■□□ 2.2
RAB28-201ENST00000288723 PHRF1Q9P1Y6 1649 aaKnown RBP28.79■■■□□ 2.2
RAB28-201ENST00000288723 NLRP6P59044 892 aa28.79■■■□□ 2.2
RAB28-201ENST00000288723 KTN1Q86UP2 1357 aaKnown RBP28.79■■■□□ 2.2
RAB28-201ENST00000288723 TTC21BQ7Z4L5 1316 aa28.79■■■□□ 2.2
RAB28-201ENST00000288723 USP19O94966 1318 aa28.78■■■□□ 2.2
RAB28-201ENST00000288723 TNKS1BP1Q9C0C2 1729 aaKnown RBP28.78■■■□□ 2.2
RAB28-201ENST00000288723 AKAP12Q02952 1782 aa28.77■■■□□ 2.2
RAB28-201ENST00000288723 CCDC9Q9Y3X0 531 aaKnown RBP28.77■■■□□ 2.2
RAB28-201ENST00000288723 CD163L1Q9NR16 1453 aa28.76■■■□□ 2.19
RAB28-201ENST00000288723 GCP02774 474 aa28.76■■■□□ 2.19
RAB28-201ENST00000288723 PUS7Q96PZ0 661 aaKnown RBP28.76■■■□□ 2.19
RAB28-201ENST00000288723 NWD2Q9ULI1 1742 aa28.75■■■□□ 2.19
RAB28-201ENST00000288723 COL14A1Q05707 1796 aaKnown RBP28.75■■■□□ 2.19
RAB28-201ENST00000288723 VPS72Q15906 364 aa28.75■■■□□ 2.19
RAB28-201ENST00000288723 SLC24A1O60721 1099 aa28.73■■■□□ 2.19
RAB28-201ENST00000288723 TMF1P82094 1093 aa28.73■■■□□ 2.19
RAB28-201ENST00000288723 SUGP2Q8IX01 1082 aaKnown RBP eCLIP28.73■■■□□ 2.193e-7■■■■□ 22.8
RAB28-201ENST00000288723 NRKQ7Z2Y5 1582 aa28.73■■■□□ 2.19
RAB28-201ENST00000288723 PIK3C2AO00443 1686 aa28.73■■■□□ 2.19
RAB28-201ENST00000288723 HDGFL2Q7Z4V5 671 aaPredicted RBP28.72■■■□□ 2.19
RAB28-201ENST00000288723 GLI3P10071 1580 aa28.72■■■□□ 2.19
RAB28-201ENST00000288723 TTC21AQ8NDW8 1320 aa28.7■■■□□ 2.18
RAB28-201ENST00000288723 TERF2IPQ9NYB0 399 aa28.69■■■□□ 2.18
RAB28-201ENST00000288723 NRAPQ86VF7 1730 aa28.69■■■□□ 2.18
RAB28-201ENST00000288723 ZBTB7CA1YPR0 619 aa28.69■■■□□ 2.18
RAB28-201ENST00000288723 ZRANB1Q9UGI0 708 aa28.69■■■□□ 2.18
RAB28-201ENST00000288723 A0A1W2PP64 1363 aa28.69■■■□□ 2.18
RAB28-201ENST00000288723 MON2Q7Z3U7 1717 aa28.68■■■□□ 2.18
RAB28-201ENST00000288723 SOX12O15370 315 aa28.67■■■□□ 2.18
RAB28-201ENST00000288723 STRN4Q9NRL3 753 aa28.67■■■□□ 2.18
RAB28-201ENST00000288723 CPDO75976 1380 aa28.66■■■□□ 2.18
RAB28-201ENST00000288723 NME9Q86XW9 330 aa28.66■■■□□ 2.18
RAB28-201ENST00000288723 UPF1Q92900 1129 aaKnown RBP eCLIP28.65■■■□□ 2.18
RAB28-201ENST00000288723 SLIT3O75094 1523 aa28.64■■■□□ 2.18
RAB28-201ENST00000288723 SEPT12Q8IYM1 358 aa28.62■■■□□ 2.17
RAB28-201ENST00000288723 NINLQ9Y2I6 1382 aa28.62■■■□□ 2.17
RAB28-201ENST00000288723 EDC4Q6P2E9 1401 aaKnown RBP28.62■■■□□ 2.17
RAB28-201ENST00000288723 EVA1CP58658 441 aa28.62■■■□□ 2.17
RAB28-201ENST00000288723 CAMTA1Q9Y6Y1 1673 aa28.62■■■□□ 2.17
RAB28-201ENST00000288723 SPATA31A5Q5VU36 1347 aa28.61■■■□□ 2.17
RAB28-201ENST00000288723 SPATA31A7Q8IWB4 1347 aa28.61■■■□□ 2.17
RAB28-201ENST00000288723 FAM98CQ17RN3 349 aaKnown RBP28.61■■■□□ 2.17
RAB28-201ENST00000288723 HSPA5P11021 654 aaKnown RBP28.6■■■□□ 2.17
RAB28-201ENST00000288723 ONECUT3O60422 494 aaPredicted RBP28.59■■■□□ 2.17
RAB28-201ENST00000288723 EIF4G2P78344 907 aaKnown RBP eCLIP28.59■■■□□ 2.17
RAB28-201ENST00000288723 CDCA8Q53HL2 280 aa28.59■■■□□ 2.17
RAB28-201ENST00000288723 A0A0G2JS52 829 aa28.59■■■□□ 2.17
RAB28-201ENST00000288723 MYT1Q01538 1121 aa28.59■■■□□ 2.17
RAB28-201ENST00000288723 KCNH5Q8NCM2 988 aa28.59■■■□□ 2.17
RAB28-201ENST00000288723 LARP1Q6PKG0 1096 aaKnown RBP28.57■■■□□ 2.16
RAB28-201ENST00000288723 USP35Q9P2H5 1018 aa28.57■■■□□ 2.16
RAB28-201ENST00000288723 LMO7Q8WWI1 1683 aa28.57■■■□□ 2.16
RAB28-201ENST00000288723 USP31Q70CQ4 1352 aa28.57■■■□□ 2.16
RAB28-201ENST00000288723 ANKRD36BQ8N2N9 1353 aa28.56■■■□□ 2.16
RAB28-201ENST00000288723 ARHGEF25Q86VW2 580 aa28.55■■■□□ 2.16
RAB28-201ENST00000288723 SPATA31A1Q5TZJ5 1347 aa28.55■■■□□ 2.16
RAB28-201ENST00000288723 EP400Q96L91 3159 aa28.55■■■□□ 2.16
RAB28-201ENST00000288723 AXIN2Q9Y2T1 843 aa28.55■■■□□ 2.16
RAB28-201ENST00000288723 AATKQ6ZMQ8 1374 aa28.54■■■□□ 2.16
RAB28-201ENST00000288723 POLR3GLQ9BT43 218 aa28.54■■■□□ 2.16
RAB28-201ENST00000288723 NFAT5O94916 1531 aa28.52■■■□□ 2.16
RAB28-201ENST00000288723 BRWD3Q6RI45 1802 aa28.52■■■□□ 2.16
RAB28-201ENST00000288723 COL5A2P05997 1499 aaPredicted RBP28.51■■■□□ 2.15
RAB28-201ENST00000288723 COL18A1P39060 1754 aa28.48■■■□□ 2.15
RAB28-201ENST00000288723 KRT27Q7Z3Y8 459 aa28.48■■■□□ 2.15
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms