RNA–Protein interactions for RNA: ENST00000288139.9

CACNA1D-201, Transcript of calcium voltage-gated channel subunit alpha1 D, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CACNA1D, Length 9,341 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1D-201ENST00000288139 MCM3P25205 808 aa10.01□□□□□ -0.81
CACNA1D-201ENST00000288139 JMYQ8N9B5 988 aa10.01□□□□□ -0.81
CACNA1D-201ENST00000288139 DEF6Q9H4E7 631 aa10.01□□□□□ -0.81
CACNA1D-201ENST00000288139 ERLIN2O94905 339 aa10.01□□□□□ -0.81
CACNA1D-201ENST00000288139 HMGB1P09429 215 aaKnown RBP10.01□□□□□ -0.81
CACNA1D-201ENST00000288139 CTR9Q6PD62 1173 aa10.01□□□□□ -0.81
CACNA1D-201ENST00000288139 CCDC73Q6ZRK6 1079 aa10.01□□□□□ -0.81
CACNA1D-201ENST00000288139 RPRD2Q5VT52 1461 aaKnown RBP10.01□□□□□ -0.81
CACNA1D-201ENST00000288139 VGFO15240 615 aaPredicted RBP10.01□□□□□ -0.81
CACNA1D-201ENST00000288139 TMEM132AQ24JP5 1023 aa10.01□□□□□ -0.81
CACNA1D-201ENST00000288139 ANKRD1Q15327 319 aa10□□□□□ -0.81
CACNA1D-201ENST00000288139 CFAP57Q96MR6 1250 aa10□□□□□ -0.81
CACNA1D-201ENST00000288139 WDR33Q9C0J8 1336 aaKnown RBP10□□□□□ -0.81
CACNA1D-201ENST00000288139 NESP48681 1621 aa10□□□□□ -0.81
CACNA1D-201ENST00000288139 H3BQV1 296 aa10□□□□□ -0.81
CACNA1D-201ENST00000288139 IFFO2Q5TF58 517 aa10□□□□□ -0.81
CACNA1D-201ENST00000288139 AEBP1Q8IUX7 1158 aa10□□□□□ -0.81
CACNA1D-201ENST00000288139 CALCOCO1Q9P1Z2 691 aa10□□□□□ -0.81
CACNA1D-201ENST00000288139 NEUROD2Q15784 382 aa10□□□□□ -0.81
CACNA1D-201ENST00000288139 DHX16O60231 1041 aaKnown RBP10□□□□□ -0.81
CACNA1D-201ENST00000288139 CCDC192P0DO97 292 aa10□□□□□ -0.81
CACNA1D-201ENST00000288139 FAM13BQ9NYF5 915 aa10□□□□□ -0.81
CACNA1D-201ENST00000288139 TRIM29Q14134 588 aa10□□□□□ -0.81
CACNA1D-201ENST00000288139 TUBBP07437 444 aa9.99□□□□□ -0.81
CACNA1D-201ENST00000288139 PNISRQ8TF01 805 aaKnown RBP9.99□□□□□ -0.81
CACNA1D-201ENST00000288139 CCDC175P0C221 793 aa9.99□□□□□ -0.81
CACNA1D-201ENST00000288139 TOMM22Q9NS69 142 aa9.99□□□□□ -0.81
CACNA1D-201ENST00000288139 GBP2P32456 591 aaPredicted RBP9.99□□□□□ -0.81
CACNA1D-201ENST00000288139 DDX23Q9BUQ8 820 aaKnown RBP9.99□□□□□ -0.81
CACNA1D-201ENST00000288139 LUC7LQ9NQ29 371 aaKnown RBP9.99□□□□□ -0.81
CACNA1D-201ENST00000288139 GBP3Q9H0R5 595 aa9.99□□□□□ -0.81
CACNA1D-201ENST00000288139 IQGAP2Q13576 1575 aa9.99□□□□□ -0.81
CACNA1D-201ENST00000288139 CLCN1P35523 988 aa9.99□□□□□ -0.81
CACNA1D-201ENST00000288139 SYNJ2O15056 1496 aa9.98□□□□□ -0.81
CACNA1D-201ENST00000288139 SYCP1Q15431 976 aa9.98□□□□□ -0.81
CACNA1D-201ENST00000288139 TEX14Q8IWB6 1497 aa9.98□□□□□ -0.81
CACNA1D-201ENST00000288139 STAMBPO95630 424 aa9.98□□□□□ -0.81
CACNA1D-201ENST00000288139 MNS1Q8NEH6 495 aa9.98□□□□□ -0.81
CACNA1D-201ENST00000288139 GRPEL1Q9HAV7 217 aa9.98□□□□□ -0.81
CACNA1D-201ENST00000288139 NAIPQ13075 1403 aa9.98□□□□□ -0.81
CACNA1D-201ENST00000288139 ABCA10Q8WWZ4 1543 aa9.98□□□□□ -0.81
CACNA1D-201ENST00000288139 OFD1O75665 1012 aa9.98□□□□□ -0.81
CACNA1D-201ENST00000288139 EXOC6Q8TAG9 804 aa9.98□□□□□ -0.81
CACNA1D-201ENST00000288139 LEKR1Q6ZMV7 388 aa9.98□□□□□ -0.81
CACNA1D-201ENST00000288139 GCC2Q8IWJ2 1684 aa9.98□□□□□ -0.81
CACNA1D-201ENST00000288139 H0YHG0 523 aa9.98□□□□□ -0.81
CACNA1D-201ENST00000288139 NAP1L1P55209 391 aaKnown RBP9.98□□□□□ -0.81
CACNA1D-201ENST00000288139 SPATA24Q86W54 205 aa9.98□□□□□ -0.81
CACNA1D-201ENST00000288139 CLASRPQ8N2M8 674 aaKnown RBP9.98□□□□□ -0.81
CACNA1D-201ENST00000288139 TROQ12816 1431 aaPredicted RBP9.97□□□□□ -0.81
CACNA1D-201ENST00000288139 VPS37DQ86XT2 251 aa9.97□□□□□ -0.81
CACNA1D-201ENST00000288139 BCL11BQ9C0K0 894 aaPredicted RBP9.97□□□□□ -0.81
CACNA1D-201ENST00000288139 GRIN2BQ13224 1484 aa9.97□□□□□ -0.81
CACNA1D-201ENST00000288139 TSPY26PQ9H489 355 aa9.97□□□□□ -0.81
CACNA1D-201ENST00000288139 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.97□□□□□ -0.81
CACNA1D-201ENST00000288139 POLR3GO15318 223 aaPredicted RBP9.97□□□□□ -0.81
CACNA1D-201ENST00000288139 NF2P35240 595 aa9.97□□□□□ -0.81
CACNA1D-201ENST00000288139 GOLGA6L9A6NEM1 432 aa9.97□□□□□ -0.81
CACNA1D-201ENST00000288139 WDHD1O75717 1129 aaPredicted RBP9.97□□□□□ -0.81
CACNA1D-201ENST00000288139 SASS6Q6UVJ0 657 aa9.97□□□□□ -0.81
CACNA1D-201ENST00000288139 TMEM87AQ8NBN3 555 aa9.97□□□□□ -0.81
CACNA1D-201ENST00000288139 CRBNQ96SW2 442 aa9.96□□□□□ -0.81
CACNA1D-201ENST00000288139 PCF11O94913 1555 aaKnown RBP9.96□□□□□ -0.81
CACNA1D-201ENST00000288139 POTEB2H3BUK9 544 aa9.96□□□□□ -0.81
CACNA1D-201ENST00000288139 MCM4P33991 863 aa9.96□□□□□ -0.81
CACNA1D-201ENST00000288139 DDX11Q96FC9 970 aa9.96□□□□□ -0.81
CACNA1D-201ENST00000288139 KIF14Q15058 1648 aa9.96□□□□□ -0.81
CACNA1D-201ENST00000288139 RAD21O60216 631 aa9.96□□□□□ -0.82
CACNA1D-201ENST00000288139 GNAI3P08754 354 aa9.96□□□□□ -0.82
CACNA1D-201ENST00000288139 SNAPC4Q5SXM2 1469 aa9.96□□□□□ -0.82
CACNA1D-201ENST00000288139 PANK3Q9H999 370 aa9.96□□□□□ -0.82
CACNA1D-201ENST00000288139 HMGB3O15347 200 aaKnown RBP9.95□□□□□ -0.82
CACNA1D-201ENST00000288139 C9orf84Q5VXU9 1444 aa9.95□□□□□ -0.82
CACNA1D-201ENST00000288139 TRHP20396 242 aaPredicted RBP9.95□□□□□ -0.82
CACNA1D-201ENST00000288139 LRPPRCP42704 1394 aaKnown RBP9.95□□□□□ -0.82
CACNA1D-201ENST00000288139 KINO60870 393 aaKnown RBP9.95□□□□□ -0.82
CACNA1D-201ENST00000288139 NEBLO76041 1014 aa9.95□□□□□ -0.82
CACNA1D-201ENST00000288139 ZWINTO95229 277 aa9.95□□□□□ -0.82
CACNA1D-201ENST00000288139 MSH5O43196 834 aa9.94□□□□□ -0.82
CACNA1D-201ENST00000288139 PHF23Q9BUL5 403 aaPredicted RBP9.94□□□□□ -0.82
CACNA1D-201ENST00000288139 TRIM6-TRIM34B2RNG4 842 aa9.94□□□□□ -0.82
CACNA1D-201ENST00000288139 HOMER2Q9NSB8 354 aa9.94□□□□□ -0.82
CACNA1D-201ENST00000288139 MYH10P35580 1976 aa9.94□□□□□ -0.82
CACNA1D-201ENST00000288139 GOLGA6L10A6NI86 522 aa9.94□□□□□ -0.82
CACNA1D-201ENST00000288139 ERC1Q8IUD2 1116 aa9.94□□□□□ -0.82
CACNA1D-201ENST00000288139 SPDYE4A6NLX3 237 aa9.94□□□□□ -0.82
CACNA1D-201ENST00000288139 CBFA2T2O43439 604 aa9.94□□□□□ -0.82
CACNA1D-201ENST00000288139 UVSSAQ2YD98 709 aa9.94□□□□□ -0.82
CACNA1D-201ENST00000288139 IFT57Q9NWB7 429 aa9.93□□□□□ -0.82
CACNA1D-201ENST00000288139 KIF20AO95235 890 aa9.93□□□□□ -0.82
CACNA1D-201ENST00000288139 ZSCAN31Q96LW9 406 aaPredicted RBP9.93□□□□□ -0.82
CACNA1D-201ENST00000288139 POLR1AO95602 1720 aaPredicted RBP9.93□□□□□ -0.82
CACNA1D-201ENST00000288139 ZNF396Q96N95 335 aaPredicted RBP9.93□□□□□ -0.82
CACNA1D-201ENST00000288139 ZNHIT6Q9NWK9 470 aaKnown RBP9.93□□□□□ -0.82
CACNA1D-201ENST00000288139 SMC3Q9UQE7 1217 aa9.93□□□□□ -0.82
CACNA1D-201ENST00000288139 ERICH2A1L162 156 aa9.93□□□□□ -0.82
CACNA1D-201ENST00000288139 SENP3Q9H4L4 574 aaPredicted RBP9.93□□□□□ -0.82
CACNA1D-201ENST00000288139 DACH1Q9UI36 760 aa9.93□□□□□ -0.82
CACNA1D-201ENST00000288139 RUSC2Q8N2Y8 1516 aa9.92□□□□□ -0.82
CACNA1D-201ENST00000288139 RPGRIP1LQ68CZ1 1315 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms