RNA–Protein interactions for RNA: ENST00000287437.7

NSMCE2-201, Transcript of NSE2 (MMS21) homolog, SMC5-SMC6 complex SUMO ligase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NSMCE2, Length 1,195 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE2-201ENST00000287437 GPRASP1Q5JY77 1395 aa15.92■□□□□ 0.14
NSMCE2-201ENST00000287437 EN1Q05925 392 aaPredicted RBP15.92■□□□□ 0.14
NSMCE2-201ENST00000287437 TRAK1Q9UPV9 953 aa15.92■□□□□ 0.14
NSMCE2-201ENST00000287437 COL14A1Q05707 1796 aaKnown RBP15.92■□□□□ 0.14
NSMCE2-201ENST00000287437 ALS2Q96Q42 1657 aa15.92■□□□□ 0.14
NSMCE2-201ENST00000287437 MINK1Q8N4C8 1332 aaPredicted RBP15.92■□□□□ 0.14
NSMCE2-201ENST00000287437 ACIN1Q9UKV3 1341 aaKnown RBP15.92■□□□□ 0.14
NSMCE2-201ENST00000287437 ADGRB1O14514 1584 aa15.92■□□□□ 0.14
NSMCE2-201ENST00000287437 SPATA31A5Q5VU36 1347 aa15.91■□□□□ 0.14
NSMCE2-201ENST00000287437 SPATA31A7Q8IWB4 1347 aa15.91■□□□□ 0.14
NSMCE2-201ENST00000287437 TULP4Q9NRJ4 1543 aa15.89■□□□□ 0.13
NSMCE2-201ENST00000287437 EIF3AQ14152 1382 aaKnown RBP15.88■□□□□ 0.13
NSMCE2-201ENST00000287437 RGPD1P0DJD0 1748 aa15.88■□□□□ 0.13
NSMCE2-201ENST00000287437 PAK3O75914 559 aaPredicted RBP15.88■□□□□ 0.13
NSMCE2-201ENST00000287437 R3HDM1Q15032 1099 aaKnown RBP15.88■□□□□ 0.13
NSMCE2-201ENST00000287437 THSD7AQ9UPZ6 1657 aa15.88■□□□□ 0.13
NSMCE2-201ENST00000287437 WASLO00401 505 aaPredicted RBP15.87■□□□□ 0.13
NSMCE2-201ENST00000287437 NGDNQ8NEJ9 315 aaKnown RBP15.87■□□□□ 0.13
NSMCE2-201ENST00000287437 PRDM11Q9NQV5 511 aa15.87■□□□□ 0.13
NSMCE2-201ENST00000287437 CRYBG1Q9Y4K1 1723 aa15.87■□□□□ 0.13
NSMCE2-201ENST00000287437 DISP2A7MBM2 1401 aa15.86■□□□□ 0.13
NSMCE2-201ENST00000287437 TNS1Q9HBL0 1735 aaKnown RBP15.85■□□□□ 0.13
NSMCE2-201ENST00000287437 EZH2Q15910 746 aaKnown RBP15.85■□□□□ 0.13
NSMCE2-201ENST00000287437 CHRNA2Q15822 529 aa15.84■□□□□ 0.13
NSMCE2-201ENST00000287437 KDM2AQ9Y2K7 1162 aa15.84■□□□□ 0.13
NSMCE2-201ENST00000287437 SPATA31A1Q5TZJ5 1347 aa15.84■□□□□ 0.13
NSMCE2-201ENST00000287437 KIAA0232Q92628 1395 aa15.84■□□□□ 0.13
NSMCE2-201ENST00000287437 STRN4Q9NRL3 753 aa15.83■□□□□ 0.12
NSMCE2-201ENST00000287437 TRIM37O94972 964 aa15.82■□□□□ 0.12
NSMCE2-201ENST00000287437 DCAF11Q8TEB1 546 aa15.82■□□□□ 0.12
NSMCE2-201ENST00000287437 RAB3GAP2Q9H2M9 1393 aa15.82■□□□□ 0.12
NSMCE2-201ENST00000287437 ATP7BP35670 1465 aa15.82■□□□□ 0.12
NSMCE2-201ENST00000287437 ZC3H6P61129 1189 aaKnown RBP15.81■□□□□ 0.12
NSMCE2-201ENST00000287437 CAMKK2Q96RR4 588 aa15.81■□□□□ 0.12
NSMCE2-201ENST00000287437 PHRF1Q9P1Y6 1649 aaKnown RBP15.8■□□□□ 0.12
NSMCE2-201ENST00000287437 NUTM2GQ5VZR2 741 aa15.8■□□□□ 0.12
NSMCE2-201ENST00000287437 FAM196AQ6ZSG2 479 aa15.8■□□□□ 0.12
NSMCE2-201ENST00000287437 NUDT16Q96DE0 195 aaKnown RBP15.8■□□□□ 0.12
NSMCE2-201ENST00000287437 USP35Q9P2H5 1018 aa15.8■□□□□ 0.12
NSMCE2-201ENST00000287437 ITSN1Q15811 1721 aa15.78■□□□□ 0.12
NSMCE2-201ENST00000287437 ARHGEF28Q8N1W1 1705 aaKnown RBP15.78■□□□□ 0.12
NSMCE2-201ENST00000287437 APBA3O96018 575 aa15.78■□□□□ 0.12
NSMCE2-201ENST00000287437 SSH2Q76I76 1423 aa15.77■□□□□ 0.11
NSMCE2-201ENST00000287437 PARD3Q8TEW0 1356 aa15.75■□□□□ 0.11
NSMCE2-201ENST00000287437 EVA1CP58658 441 aa15.75■□□□□ 0.11
NSMCE2-201ENST00000287437 BARGINQ6ZT62 677 aa15.75■□□□□ 0.11
NSMCE2-201ENST00000287437 CDK19Q9BWU1 502 aa15.75■□□□□ 0.11
NSMCE2-201ENST00000287437 NRKQ7Z2Y5 1582 aa15.75■□□□□ 0.11
NSMCE2-201ENST00000287437 POLR3AO14802 1390 aaPredicted RBP15.75■□□□□ 0.11
NSMCE2-201ENST00000287437 ACEP12821 1306 aa15.74■□□□□ 0.11
NSMCE2-201ENST00000287437 PDE3BQ13370 1112 aa15.74■□□□□ 0.11
NSMCE2-201ENST00000287437 LARP1Q6PKG0 1096 aaKnown RBP15.74■□□□□ 0.11
NSMCE2-201ENST00000287437 TOPAZ1Q8N9V7 1692 aa15.73■□□□□ 0.11
NSMCE2-201ENST00000287437 RREB1Q92766 1687 aa15.73■□□□□ 0.11
NSMCE2-201ENST00000287437 CAMTA1Q9Y6Y1 1673 aa15.73■□□□□ 0.11
NSMCE2-201ENST00000287437 NBPF8Q3BBV2 869 aa15.73■□□□□ 0.11
NSMCE2-201ENST00000287437 STAC3Q96MF2 364 aa15.73■□□□□ 0.11
NSMCE2-201ENST00000287437 NUP188Q5SRE5 1749 aa15.72■□□□□ 0.11
NSMCE2-201ENST00000287437 TCP11L2Q8N4U5 519 aa15.72■□□□□ 0.11
NSMCE2-201ENST00000287437 CNKSR2Q8WXI2 1034 aa15.72■□□□□ 0.11
NSMCE2-201ENST00000287437 LMO7Q8WWI1 1683 aa15.71■□□□□ 0.11
NSMCE2-201ENST00000287437 ABTB2Q8N961 1025 aa15.71■□□□□ 0.11
NSMCE2-201ENST00000287437 CCDC61Q9Y6R9 512 aa15.71■□□□□ 0.11
NSMCE2-201ENST00000287437 USP19O94966 1318 aa15.7■□□□□ 0.1
NSMCE2-201ENST00000287437 CPDO75976 1380 aa15.7■□□□□ 0.1
NSMCE2-201ENST00000287437 PLEKHG3A1L390 1219 aa15.69■□□□□ 0.1
NSMCE2-201ENST00000287437 NBPF14Q5TI25 921 aa15.69■□□□□ 0.1
NSMCE2-201ENST00000287437 COL5A2P05997 1499 aaPredicted RBP15.67■□□□□ 0.1
NSMCE2-201ENST00000287437 YY1P25490 414 aa15.67■□□□□ 0.1
NSMCE2-201ENST00000287437 GCP02774 474 aa15.66■□□□□ 0.1
NSMCE2-201ENST00000287437 NCBP3Q53F19 620 aaKnown RBP15.66■□□□□ 0.1
NSMCE2-201ENST00000287437 NLRP13Q86W25 1043 aa15.66■□□□□ 0.1
NSMCE2-201ENST00000287437 THRAP3Q9Y2W1 955 aaKnown RBP15.66■□□□□ 0.1
NSMCE2-201ENST00000287437 PPIP5K1Q6PFW1 1433 aa15.66■□□□□ 0.1
NSMCE2-201ENST00000287437 ZBTB7CA1YPR0 619 aa15.65■□□□□ 0.1
NSMCE2-201ENST00000287437 SRPK2P78362 688 aaKnown RBP15.65■□□□□ 0.1
NSMCE2-201ENST00000287437 SPON1Q9HCB6 807 aa15.65■□□□□ 0.1
NSMCE2-201ENST00000287437 PPP1R1BQ9UD71 204 aaPredicted RBP15.65■□□□□ 0.1
NSMCE2-201ENST00000287437 PARP4Q9UKK3 1724 aaKnown RBP15.65■□□□□ 0.1
NSMCE2-201ENST00000287437 CRB1P82279 1406 aa15.64■□□□□ 0.09
NSMCE2-201ENST00000287437 NBPF1Q3BBV0 1214 aa15.64■□□□□ 0.09
NSMCE2-201ENST00000287437 OVOS2A0A0G2JMS6 1433 aa15.63■□□□□ 0.09
NSMCE2-201ENST00000287437 OVOS2A0A0J9YW53 1432 aa15.63■□□□□ 0.09
NSMCE2-201ENST00000287437 OVOS2Q6IE36 1432 aa15.63■□□□□ 0.09
NSMCE2-201ENST00000287437 KCNQ2O43526 872 aa15.63■□□□□ 0.09
NSMCE2-201ENST00000287437 CABP2Q9NPB3 220 aa15.63■□□□□ 0.09
NSMCE2-201ENST00000287437 PEAK1Q9H792 1746 aa15.62■□□□□ 0.09
NSMCE2-201ENST00000287437 KIAA1210Q9ULL0 1709 aa15.62■□□□□ 0.09
NSMCE2-201ENST00000287437 LRRC37A3O60309 1634 aa15.61■□□□□ 0.09
NSMCE2-201ENST00000287437 C11orf95C9JLR9 678 aaPredicted RBP15.6■□□□□ 0.09
NSMCE2-201ENST00000287437 NLRP6P59044 892 aa15.6■□□□□ 0.09
NSMCE2-201ENST00000287437 PTF1AQ7RTS3 328 aa15.6■□□□□ 0.09
NSMCE2-201ENST00000287437 ANO8Q9HCE9 1232 aaPredicted RBP15.6■□□□□ 0.09
NSMCE2-201ENST00000287437 CENPJQ9HC77 1338 aaPredicted RBP15.6■□□□□ 0.09
NSMCE2-201ENST00000287437 AATKQ6ZMQ8 1374 aa15.6■□□□□ 0.09
NSMCE2-201ENST00000287437 NINLQ9Y2I6 1382 aa15.6■□□□□ 0.09
NSMCE2-201ENST00000287437 USP6P35125 1406 aa15.6■□□□□ 0.09
NSMCE2-201ENST00000287437 DDB1Q16531 1140 aa15.59■□□□□ 0.09
NSMCE2-201ENST00000287437 TOM1L2Q6ZVM7 507 aa15.59■□□□□ 0.09
NSMCE2-201ENST00000287437 SLIT3O75094 1523 aa15.58■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms