RNA–Protein interactions for RNA: ENST00000285814.8

NIFK-201, Transcript of nucleolar protein interacting with the FHA domain of MKI67, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NIFK, Length 1,734 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIFK-201ENST00000285814 ATF3P18847 181 aa24.76■■□□□ 1.55
NIFK-201ENST00000285814 YTHDC1Q96MU7 727 aaKnown RBP24.76■■□□□ 1.55
NIFK-201ENST00000285814 TTC21BQ7Z4L5 1316 aa24.76■■□□□ 1.55
NIFK-201ENST00000285814 KIF1AQ12756 1690 aa24.76■■□□□ 1.55
NIFK-201ENST00000285814 CADPS2Q86UW7 1296 aa24.75■■□□□ 1.55
NIFK-201ENST00000285814 ESCO1Q5FWF5 840 aa24.74■■□□□ 1.55
NIFK-201ENST00000285814 NME9Q86XW9 330 aa24.73■■□□□ 1.55
NIFK-201ENST00000285814 TTC21AQ8NDW8 1320 aa24.73■■□□□ 1.55
NIFK-201ENST00000285814 PNISRQ8TF01 805 aaKnown RBP24.72■■□□□ 1.55
NIFK-201ENST00000285814 ORAI2Q96SN7 254 aa24.7■■□□□ 1.54
NIFK-201ENST00000285814 TNNT2P45379 298 aaPredicted RBP24.69■■□□□ 1.54
NIFK-201ENST00000285814 SCAF1Q9H7N4 1312 aaKnown RBP24.69■■□□□ 1.54
NIFK-201ENST00000285814 PIK3C2AO00443 1686 aa24.69■■□□□ 1.54
NIFK-201ENST00000285814 LTBP4Q8N2S1 1624 aa24.69■■□□□ 1.54
NIFK-201ENST00000285814 OVOS2A0A0J9YW53 1432 aa24.69■■□□□ 1.54
NIFK-201ENST00000285814 OVOS2Q6IE36 1432 aa24.69■■□□□ 1.54
NIFK-201ENST00000285814 FAM9BQ8IZU0 186 aa24.69■■□□□ 1.54
NIFK-201ENST00000285814 USP54Q70EL1 1684 aa24.68■■□□□ 1.54
NIFK-201ENST00000285814 COG3Q96JB2 828 aa24.66■■□□□ 1.54
NIFK-201ENST00000285814 ZRANB1Q9UGI0 708 aa24.66■■□□□ 1.54
NIFK-201ENST00000285814 USP31Q70CQ4 1352 aa24.65■■□□□ 1.54
NIFK-201ENST00000285814 AATKQ6ZMQ8 1374 aa24.63■■□□□ 1.53
NIFK-201ENST00000285814 MTHFSP49914 203 aa24.63■■□□□ 1.53
NIFK-201ENST00000285814 TRPM3Q9HCF6 1732 aaPredicted RBP24.63■■□□□ 1.53
NIFK-201ENST00000285814 MARF1Q9Y4F3 1742 aaKnown RBP24.63■■□□□ 1.53
NIFK-201ENST00000285814 PSME1Q06323 249 aa24.62■■□□□ 1.53
NIFK-201ENST00000285814 FOXO3O43524 673 aa24.61■■□□□ 1.53
NIFK-201ENST00000285814 AEBP2Q6ZN18 517 aaPredicted RBP24.61■■□□□ 1.53
NIFK-201ENST00000285814 MAP2P11137 1827 aaKnown RBP24.61■■□□□ 1.53
NIFK-201ENST00000285814 SMG6Q86US8 1419 aaKnown RBP24.6■■□□□ 1.53
NIFK-201ENST00000285814 INSRP06213 1382 aa24.6■■□□□ 1.53
NIFK-201ENST00000285814 SHPRHQ149N8 1683 aa24.6■■□□□ 1.53
NIFK-201ENST00000285814 COL3A1P02461 1466 aaPredicted RBP24.57■■□□□ 1.52
NIFK-201ENST00000285814 CFAP53Q96M91 514 aa24.57■■□□□ 1.52
NIFK-201ENST00000285814 SLAIN2Q9P270 581 aa24.57■■□□□ 1.52
NIFK-201ENST00000285814 PAK3O75914 559 aaPredicted RBP24.56■■□□□ 1.52
NIFK-201ENST00000285814 POLKQ9UBT6 870 aa24.56■■□□□ 1.52
NIFK-201ENST00000285814 PNPLA6Q8IY17 1366 aa24.56■■□□□ 1.52
NIFK-201ENST00000285814 ABTB2Q8N961 1025 aa24.55■■□□□ 1.52
NIFK-201ENST00000285814 BRINP3Q76B58 766 aa24.55■■□□□ 1.52
NIFK-201ENST00000285814 KRT28Q7Z3Y7 464 aa24.55■■□□□ 1.52
NIFK-201ENST00000285814 NPHP3Q7Z494 1330 aa24.54■■□□□ 1.52
NIFK-201ENST00000285814 ALS2Q96Q42 1657 aa24.54■■□□□ 1.52
NIFK-201ENST00000285814 CDK12Q9NYV4 1490 aaPredicted RBP24.54■■□□□ 1.52
NIFK-201ENST00000285814 FBLN1P23142 703 aa24.54■■□□□ 1.52
NIFK-201ENST00000285814 NLRP6P59044 892 aa24.54■■□□□ 1.52
NIFK-201ENST00000285814 WDR43Q15061 677 aaKnown RBP eCLIP24.54■■□□□ 1.52
NIFK-201ENST00000285814 BLMP54132 1417 aaPredicted RBP24.54■■□□□ 1.52
NIFK-201ENST00000285814 HNRNPUQ00839 825 aaKnown RBP eCLIP24.53■■□□□ 1.52
NIFK-201ENST00000285814 PXDNQ92626 1479 aa24.53■■□□□ 1.52
NIFK-201ENST00000285814 XPCQ01831 940 aaPredicted RBP24.52■■□□□ 1.52
NIFK-201ENST00000285814 CENPBP07199 599 aaPredicted RBP24.52■■□□□ 1.52
NIFK-201ENST00000285814 ADAMTS8Q9UP79 889 aa24.52■■□□□ 1.52
NIFK-201ENST00000285814 SBNO1A3KN83 1393 aa24.51■■□□□ 1.51
NIFK-201ENST00000285814 EMILIN1Q9Y6C2 1016 aa24.5■■□□□ 1.51
NIFK-201ENST00000285814 RRS1Q15050 365 aaKnown RBP24.49■■□□□ 1.51
NIFK-201ENST00000285814 NUTM2GQ5VZR2 741 aa24.49■■□□□ 1.51
NIFK-201ENST00000285814 DDX17Q92841 729 aaKnown RBP24.48■■□□□ 1.51
NIFK-201ENST00000285814 PEAK1Q9H792 1746 aa24.47■■□□□ 1.51
NIFK-201ENST00000285814 NHSL1Q5SYE7 1610 aa24.47■■□□□ 1.51
NIFK-201ENST00000285814 SLIT3O75094 1523 aa24.47■■□□□ 1.51
NIFK-201ENST00000285814 NFAT5O94916 1531 aa24.46■■□□□ 1.51
NIFK-201ENST00000285814 TNS3Q68CZ2 1445 aa24.46■■□□□ 1.51
NIFK-201ENST00000285814 PPM1GO15355 546 aaPredicted RBP24.45■■□□□ 1.5
NIFK-201ENST00000285814 USP19O94966 1318 aa24.44■■□□□ 1.5
NIFK-201ENST00000285814 ZBED9Q6R2W3 1325 aa24.44■■□□□ 1.5
NIFK-201ENST00000285814 MAP3K19Q56UN5 1328 aa24.43■■□□□ 1.5
NIFK-201ENST00000285814 DIAPH1O60610 1272 aaKnown RBP24.43■■□□□ 1.5
NIFK-201ENST00000285814 SOS2Q07890 1332 aaPredicted RBP24.42■■□□□ 1.5
NIFK-201ENST00000285814 SOX12O15370 315 aa24.42■■□□□ 1.5
NIFK-201ENST00000285814 NUDCQ9Y266 331 aa24.42■■□□□ 1.5
NIFK-201ENST00000285814 KIF24Q5T7B8 1368 aa24.42■■□□□ 1.5
NIFK-201ENST00000285814 SPATA31A3Q5VYP0 1347 aa24.41■■□□□ 1.5
NIFK-201ENST00000285814 LTN1O94822 1766 aa24.41■■□□□ 1.5
NIFK-201ENST00000285814 ROBO1Q9Y6N7 1651 aa24.41■■□□□ 1.5
NIFK-201ENST00000285814 PHRF1Q9P1Y6 1649 aaKnown RBP24.4■■□□□ 1.5
NIFK-201ENST00000285814 FLT4P35916 1363 aa24.4■■□□□ 1.5
NIFK-201ENST00000285814 KCNH5Q8NCM2 988 aa24.4■■□□□ 1.5
NIFK-201ENST00000285814 MED1Q15648 1581 aaPredicted RBP24.39■■□□□ 1.5
NIFK-201ENST00000285814 LMOD2Q6P5Q4 547 aa24.39■■□□□ 1.5
NIFK-201ENST00000285814 CRYBG1Q9Y4K1 1723 aa24.39■■□□□ 1.49
NIFK-201ENST00000285814 ARHGEF10O15013 1369 aa24.39■■□□□ 1.49
NIFK-201ENST00000285814 IL13P35225 146 aa24.37■■□□□ 1.49
NIFK-201ENST00000285814 RTL1A6NKG5 1358 aa24.37■■□□□ 1.49
NIFK-201ENST00000285814 U2AF1L5P0DN76 240 aaPredicted RBP24.36■■□□□ 1.49
NIFK-201ENST00000285814 U2AF1Q01081 240 aaKnown RBP eCLIP24.36■■□□□ 1.49
NIFK-201ENST00000285814 IQSEC2Q5JU85 1478 aa24.36■■□□□ 1.49
NIFK-201ENST00000285814 AHDC1Q5TGY3 1603 aaPredicted RBP24.36■■□□□ 1.49
NIFK-201ENST00000285814 GCP02774 474 aa24.35■■□□□ 1.49
NIFK-201ENST00000285814 U2SURPO15042 1029 aaKnown RBP24.35■■□□□ 1.49
NIFK-201ENST00000285814 AMPHP49418 695 aa24.34■■□□□ 1.49
NIFK-201ENST00000285814 HSP90AB2PQ58FF8 381 aa24.34■■□□□ 1.49
NIFK-201ENST00000285814 CCDC146Q8IYE0 955 aa24.34■■□□□ 1.49
NIFK-201ENST00000285814 RGPD1P0DJD0 1748 aa24.33■■□□□ 1.49
NIFK-201ENST00000285814 EIF4A2Q14240 407 aaKnown RBP24.32■■□□□ 1.48
NIFK-201ENST00000285814 HOXC9P31274 260 aa24.32■■□□□ 1.48
NIFK-201ENST00000285814 RUNDC1Q96C34 613 aa24.32■■□□□ 1.48
NIFK-201ENST00000285814 SENP3-EIF4A1A0A087X0R7 540 aa24.3■■□□□ 1.48
NIFK-201ENST00000285814 ARHGEF25Q86VW2 580 aa24.3■■□□□ 1.48
NIFK-201ENST00000285814 TOM1O60784 492 aa24.29■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 108.3 ms