RNA–Protein interactions for RNA: ENST00000282268.7

XRCC4-201, Transcript of X-ray repair cross complementing 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene XRCC4, Length 1,696 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC4-201ENST00000282268 USP6P35125 1406 aa15.34■□□□□ 0.05
XRCC4-201ENST00000282268 AKAP12Q02952 1782 aa15.33■□□□□ 0.04
XRCC4-201ENST00000282268 PSME1Q06323 249 aa15.33■□□□□ 0.04
XRCC4-201ENST00000282268 CADPS2Q86UW7 1296 aa15.33■□□□□ 0.04
XRCC4-201ENST00000282268 C1orf167Q5SNV9 1468 aa15.32■□□□□ 0.04
XRCC4-201ENST00000282268 NCOA3Q9Y6Q9 1424 aa15.32■□□□□ 0.04
XRCC4-201ENST00000282268 POLR3AO14802 1390 aaPredicted RBP15.32■□□□□ 0.04
XRCC4-201ENST00000282268 FOXO3O43524 673 aa15.32■□□□□ 0.04
XRCC4-201ENST00000282268 FBLN1P23142 703 aa15.32■□□□□ 0.04
XRCC4-201ENST00000282268 NUTM2GQ5VZR2 741 aa15.32■□□□□ 0.04
XRCC4-201ENST00000282268 MON2Q7Z3U7 1717 aa15.32■□□□□ 0.04
XRCC4-201ENST00000282268 PLEKHG5O94827 1062 aa15.32■□□□□ 0.04
XRCC4-201ENST00000282268 COG3Q96JB2 828 aa15.32■□□□□ 0.04
XRCC4-201ENST00000282268 KIF20BQ96Q89 1820 aa15.31■□□□□ 0.04
XRCC4-201ENST00000282268 SENP3-EIF4A1A0A087X0R7 540 aa15.31■□□□□ 0.04
XRCC4-201ENST00000282268 SOX12O15370 315 aa15.31■□□□□ 0.04
XRCC4-201ENST00000282268 MST1RQ04912 1400 aa15.3■□□□□ 0.04
XRCC4-201ENST00000282268 DDX17Q92841 729 aaKnown RBP15.3■□□□□ 0.04
XRCC4-201ENST00000282268 XIRP1Q702N8 1843 aaKnown RBP15.3■□□□□ 0.04
XRCC4-201ENST00000282268 MTHFSP49914 203 aa15.29■□□□□ 0.04
XRCC4-201ENST00000282268 PNISRQ8TF01 805 aaKnown RBP15.29■□□□□ 0.04
XRCC4-201ENST00000282268 PPM1GO15355 546 aaPredicted RBP15.28■□□□□ 0.04
XRCC4-201ENST00000282268 LMOD2Q6P5Q4 547 aa15.28■□□□□ 0.04
XRCC4-201ENST00000282268 DCCP43146 1447 aa15.28■□□□□ 0.04
XRCC4-201ENST00000282268 TTC21AQ8NDW8 1320 aa15.27■□□□□ 0.04
XRCC4-201ENST00000282268 HNRNPUQ00839 825 aaKnown RBP eCLIP15.27■□□□□ 0.03
XRCC4-201ENST00000282268 NRKQ7Z2Y5 1582 aa15.27■□□□□ 0.03
XRCC4-201ENST00000282268 KRT28Q7Z3Y7 464 aa15.27■□□□□ 0.03
XRCC4-201ENST00000282268 ABTB2Q8N961 1025 aa15.27■□□□□ 0.03
XRCC4-201ENST00000282268 SSH2Q76I76 1423 aa15.26■□□□□ 0.03
XRCC4-201ENST00000282268 NLRP6P59044 892 aa15.26■□□□□ 0.03
XRCC4-201ENST00000282268 WDR43Q15061 677 aaKnown RBP eCLIP15.26■□□□□ 0.03
XRCC4-201ENST00000282268 SLAIN2Q9P270 581 aa15.25■□□□□ 0.03
XRCC4-201ENST00000282268 ANKRD26Q9UPS8 1709 aa15.25■□□□□ 0.03
XRCC4-201ENST00000282268 RRS1Q15050 365 aaKnown RBP15.25■□□□□ 0.03
XRCC4-201ENST00000282268 CFAP53Q96M91 514 aa15.25■□□□□ 0.03
XRCC4-201ENST00000282268 EMILIN1Q9Y6C2 1016 aa15.23■□□□□ 0.03
XRCC4-201ENST00000282268 BRINP3Q76B58 766 aa15.22■□□□□ 0.03
XRCC4-201ENST00000282268 POLKQ9UBT6 870 aa15.22■□□□□ 0.03
XRCC4-201ENST00000282268 ADAMTS8Q9UP79 889 aa15.22■□□□□ 0.03
XRCC4-201ENST00000282268 PIK3C2AO00443 1686 aa15.21■□□□□ 0.03
XRCC4-201ENST00000282268 KIF1AQ12756 1690 aa15.21■□□□□ 0.03
XRCC4-201ENST00000282268 ZBTB7CA1YPR0 619 aa15.21■□□□□ 0.03
XRCC4-201ENST00000282268 CENPBP07199 599 aaPredicted RBP15.21■□□□□ 0.03
XRCC4-201ENST00000282268 OVOS2A0A0J9YW53 1432 aa15.21■□□□□ 0.03
XRCC4-201ENST00000282268 OVOS2Q6IE36 1432 aa15.21■□□□□ 0.03
XRCC4-201ENST00000282268 LTBP4Q8N2S1 1624 aa15.21■□□□□ 0.02
XRCC4-201ENST00000282268 SALL2Q9Y467 1007 aaPredicted RBP15.19■□□□□ 0.02
XRCC4-201ENST00000282268 NPHP3Q7Z494 1330 aa15.19■□□□□ 0.02
XRCC4-201ENST00000282268 SCAF1Q9H7N4 1312 aaKnown RBP15.19■□□□□ 0.02
XRCC4-201ENST00000282268 U2SURPO15042 1029 aaKnown RBP15.19■□□□□ 0.02
XRCC4-201ENST00000282268 CCDC146Q8IYE0 955 aa15.19■□□□□ 0.02
XRCC4-201ENST00000282268 USP31Q70CQ4 1352 aa15.18■□□□□ 0.02
XRCC4-201ENST00000282268 DIAPH1O60610 1272 aaKnown RBP15.16■□□□□ 0.02
XRCC4-201ENST00000282268 U2AF1L5P0DN76 240 aaPredicted RBP15.16■□□□□ 0.02
XRCC4-201ENST00000282268 U2AF1Q01081 240 aaKnown RBP eCLIP15.16■□□□□ 0.02
XRCC4-201ENST00000282268 AATKQ6ZMQ8 1374 aa15.16■□□□□ 0.02
XRCC4-201ENST00000282268 AMPHP49418 695 aa15.16■□□□□ 0.02
XRCC4-201ENST00000282268 PIP4K2BP78356 416 aa15.15■□□□□ 0.02
XRCC4-201ENST00000282268 NUDCQ9Y266 331 aa15.15■□□□□ 0.02
XRCC4-201ENST00000282268 MAP3K19Q56UN5 1328 aa15.15■□□□□ 0.02
XRCC4-201ENST00000282268 MAP2P11137 1827 aaKnown RBP15.14■□□□□ 0.01
XRCC4-201ENST00000282268 TRPM3Q9HCF6 1732 aaPredicted RBP15.13■□□□□ 0.01
XRCC4-201ENST00000282268 PXDNQ92626 1479 aa15.13■□□□□ 0.01
XRCC4-201ENST00000282268 CABLES1Q8TDN4 633 aa15.12■□□□□ 0.01
XRCC4-201ENST00000282268 SHPRHQ149N8 1683 aa15.12■□□□□ 0.01
XRCC4-201ENST00000282268 COL3A1P02461 1466 aaPredicted RBP15.12■□□□□ 0.01
XRCC4-201ENST00000282268 SBNO1A3KN83 1393 aa15.12■□□□□ 0.01
XRCC4-201ENST00000282268 HSP90AB2PQ58FF8 381 aa15.12■□□□□ 0.01
XRCC4-201ENST00000282268 TNS3Q68CZ2 1445 aa15.11■□□□□ 0.01
XRCC4-201ENST00000282268 MARF1Q9Y4F3 1742 aaKnown RBP15.11■□□□□ 0.01
XRCC4-201ENST00000282268 PNPLA6Q8IY17 1366 aa15.11■□□□□ 0.01
XRCC4-201ENST00000282268 SPATA31A3Q5VYP0 1347 aa15.11■□□□□ 0.01
XRCC4-201ENST00000282268 GCP02774 474 aa15.11■□□□□ 0.01
XRCC4-201ENST00000282268 KCNH5Q8NCM2 988 aa15.11■□□□□ 0.01
XRCC4-201ENST00000282268 LTV1Q96GA3 475 aaPredicted RBP15.11■□□□□ 0.01
XRCC4-201ENST00000282268 BLMP54132 1417 aaPredicted RBP15.11■□□□□ 0.01
XRCC4-201ENST00000282268 SMG6Q86US8 1419 aaKnown RBP15.11■□□□□ 0.01
XRCC4-201ENST00000282268 UBAP1LF5GYI3 381 aa15.1■□□□□ 0.01
XRCC4-201ENST00000282268 ZC3H6P61129 1189 aaKnown RBP15.1■□□□□ 0.01
XRCC4-201ENST00000282268 CDK12Q9NYV4 1490 aaPredicted RBP15.1■□□□□ 0.01
XRCC4-201ENST00000282268 HMOX1P09601 288 aa15.09■□□□□ 0.01
XRCC4-201ENST00000282268 IL13P35225 146 aa15.09■□□□□ 0.01
XRCC4-201ENST00000282268 EIF4A2Q14240 407 aaKnown RBP15.09■□□□□ 0.01
XRCC4-201ENST00000282268 PEAK1Q9H792 1746 aa15.09■□□□□ 0.01
XRCC4-201ENST00000282268 SOS2Q07890 1332 aaPredicted RBP15.09■□□□□ 0.01
XRCC4-201ENST00000282268 TOM1O60784 492 aa15.09■□□□□ 0.01
XRCC4-201ENST00000282268 INSRP06213 1382 aa15.08■□□□□ 0.01
XRCC4-201ENST00000282268 ZBED9Q6R2W3 1325 aa15.08■□□□□ 0
XRCC4-201ENST00000282268 APAF1O14727 1248 aa15.08■□□□□ 0
XRCC4-201ENST00000282268 HOXC9P31274 260 aa15.08■□□□□ 0
XRCC4-201ENST00000282268 HAP1P54257 671 aaPredicted RBP15.08■□□□□ 0
XRCC4-201ENST00000282268 FLT4P35916 1363 aa15.08■□□□□ 0
XRCC4-201ENST00000282268 ALS2Q96Q42 1657 aa15.08■□□□□ 0
XRCC4-201ENST00000282268 ROBO1Q9Y6N7 1651 aa15.08■□□□□ 0
XRCC4-201ENST00000282268 USP19O94966 1318 aa15.07■□□□□ 0
XRCC4-201ENST00000282268 NEUROD2Q15784 382 aa15.07■□□□□ 0
XRCC4-201ENST00000282268 RUNDC1Q96C34 613 aa15.07■□□□□ 0
XRCC4-201ENST00000282268 RRP7AQ9Y3A4 280 aaKnown RBP15.07■□□□□ 0
XRCC4-201ENST00000282268 USP54Q70EL1 1684 aa15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms