RNA–Protein interactions for RNA: ENST00000279550.11

YBX3-202, Transcript of Y-box binding protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene YBX3, Length 1,708 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-202ENST00000279550 DCCP43146 1447 aa27.93■■■□□ 2.06
YBX3-202ENST00000279550 MON2Q7Z3U7 1717 aa27.93■■■□□ 2.06
YBX3-202ENST00000279550 WDR43Q15061 677 aaKnown RBP eCLIP27.93■■■□□ 2.06
YBX3-202ENST00000279550 MORC1Q86VD1 984 aa27.92■■■□□ 2.06
YBX3-202ENST00000279550 PMFBP1Q8TBY8 1022 aa27.92■■■□□ 2.06
YBX3-202ENST00000279550 POLR3AO14802 1390 aaPredicted RBP27.92■■■□□ 2.06
YBX3-202ENST00000279550 FYB1O15117 783 aa27.89■■■□□ 2.06
YBX3-202ENST00000279550 XIRP1Q702N8 1843 aaKnown RBP27.89■■■□□ 2.06
YBX3-202ENST00000279550 USP6P35125 1406 aa27.89■■■□□ 2.05
YBX3-202ENST00000279550 MSH6P52701 1360 aa27.89■■■□□ 2.05
YBX3-202ENST00000279550 ATF3P18847 181 aa27.89■■■□□ 2.05
YBX3-202ENST00000279550 NGDNQ8NEJ9 315 aaKnown RBP27.89■■■□□ 2.05
YBX3-202ENST00000279550 SUGP2Q8IX01 1082 aaKnown RBP eCLIP27.88■■■□□ 2.05
YBX3-202ENST00000279550 TNNT2P45379 298 aaPredicted RBP27.87■■■□□ 2.05
YBX3-202ENST00000279550 PHF8Q9UPP1 1060 aa27.87■■■□□ 2.05
YBX3-202ENST00000279550 NRKQ7Z2Y5 1582 aa27.86■■■□□ 2.05
YBX3-202ENST00000279550 ESCO1Q5FWF5 840 aa27.86■■■□□ 2.05
YBX3-202ENST00000279550 GGNBP2Q9H3C7 697 aa27.86■■■□□ 2.05
YBX3-202ENST00000279550 CADPS2Q86UW7 1296 aa27.85■■■□□ 2.05
YBX3-202ENST00000279550 C1orf167Q5SNV9 1468 aa27.85■■■□□ 2.05
YBX3-202ENST00000279550 KIF20BQ96Q89 1820 aa27.84■■■□□ 2.05
YBX3-202ENST00000279550 AEBP2Q6ZN18 517 aaPredicted RBP27.84■■■□□ 2.05
YBX3-202ENST00000279550 PDE3BQ13370 1112 aa27.84■■■□□ 2.05
YBX3-202ENST00000279550 MST1RQ04912 1400 aa27.84■■■□□ 2.05
YBX3-202ENST00000279550 SHPRHQ149N8 1683 aa27.83■■■□□ 2.05
YBX3-202ENST00000279550 RNF123Q5XPI4 1314 aa27.83■■■□□ 2.05
YBX3-202ENST00000279550 SSH2Q76I76 1423 aa27.83■■■□□ 2.05
YBX3-202ENST00000279550 CDCA7LQ96GN5 454 aa27.83■■■□□ 2.05
YBX3-202ENST00000279550 ANKRD26Q9UPS8 1709 aa27.82■■■□□ 2.04
YBX3-202ENST00000279550 TTC21BQ7Z4L5 1316 aa27.82■■■□□ 2.04
YBX3-202ENST00000279550 ORAI2Q96SN7 254 aa27.81■■■□□ 2.04
YBX3-202ENST00000279550 NME9Q86XW9 330 aa27.8■■■□□ 2.04
YBX3-202ENST00000279550 CCDC146Q8IYE0 955 aa27.79■■■□□ 2.04
YBX3-202ENST00000279550 ERICH6BQ5W0A0 696 aa27.77■■■□□ 2.04
YBX3-202ENST00000279550 TTC21AQ8NDW8 1320 aa27.77■■■□□ 2.04
YBX3-202ENST00000279550 MTHFSP49914 203 aa27.75■■■□□ 2.03
YBX3-202ENST00000279550 LTBP4Q8N2S1 1624 aa27.74■■■□□ 2.03
YBX3-202ENST00000279550 KIF1AQ12756 1690 aa27.74■■■□□ 2.03
YBX3-202ENST00000279550 ZRANB1Q9UGI0 708 aa27.73■■■□□ 2.03
YBX3-202ENST00000279550 ZNF521Q96K83 1311 aa27.73■■■□□ 2.03
YBX3-202ENST00000279550 COG3Q96JB2 828 aa27.72■■■□□ 2.03
YBX3-202ENST00000279550 FOXO3O43524 673 aa27.72■■■□□ 2.03
YBX3-202ENST00000279550 PSME1Q06323 249 aa27.72■■■□□ 2.03
YBX3-202ENST00000279550 OVOS2A0A0J9YW53 1432 aa27.7■■■□□ 2.02
YBX3-202ENST00000279550 OVOS2Q6IE36 1432 aa27.7■■■□□ 2.02
YBX3-202ENST00000279550 APAF1O14727 1248 aa27.69■■■□□ 2.02
YBX3-202ENST00000279550 PELP1Q8IZL8 1130 aaKnown RBP27.69■■■□□ 2.02
YBX3-202ENST00000279550 PPP4R2Q9NY27 417 aa27.69■■■□□ 2.02
YBX3-202ENST00000279550 RCAN3Q9UKA8 241 aa27.68■■■□□ 2.02
YBX3-202ENST00000279550 PIK3C2AO00443 1686 aa27.68■■■□□ 2.02
YBX3-202ENST00000279550 SLAIN2Q9P270 581 aa27.67■■■□□ 2.02
YBX3-202ENST00000279550 PAK3O75914 559 aaPredicted RBP27.67■■■□□ 2.02
YBX3-202ENST00000279550 CFAP53Q96M91 514 aa27.66■■■□□ 2.02
YBX3-202ENST00000279550 USP31Q70CQ4 1352 aa27.65■■■□□ 2.02
YBX3-202ENST00000279550 AATKQ6ZMQ8 1374 aa27.63■■■□□ 2.01
YBX3-202ENST00000279550 COL3A1P02461 1466 aaPredicted RBP27.63■■■□□ 2.01
YBX3-202ENST00000279550 XPCQ01831 940 aaPredicted RBP27.63■■■□□ 2.01
YBX3-202ENST00000279550 BRINP3Q76B58 766 aa27.63■■■□□ 2.01
YBX3-202ENST00000279550 ABTB2Q8N961 1025 aa27.63■■■□□ 2.01
YBX3-202ENST00000279550 RRP1P56182 461 aaKnown RBP27.62■■■□□ 2.01
YBX3-202ENST00000279550 KRT28Q7Z3Y7 464 aa27.62■■■□□ 2.01
YBX3-202ENST00000279550 NPHP3Q7Z494 1330 aa27.61■■■□□ 2.01
YBX3-202ENST00000279550 FBLN1P23142 703 aa27.61■■■□□ 2.01
YBX3-202ENST00000279550 NLRP6P59044 892 aa27.61■■■□□ 2.01
YBX3-202ENST00000279550 IQSEC2Q5JU85 1478 aa27.6■■■□□ 2.01
YBX3-202ENST00000279550 GOLGA2Q08379 1002 aa27.6■■■□□ 2.01
YBX3-202ENST00000279550 TRPM3Q9HCF6 1732 aaPredicted RBP27.59■■■□□ 2.01
YBX3-202ENST00000279550 DUSP27Q5VZP5 1158 aa27.59■■■□□ 2.01
YBX3-202ENST00000279550 POLKQ9UBT6 870 aa27.59■■■□□ 2.01
YBX3-202ENST00000279550 USP54Q70EL1 1684 aa27.59■■■□□ 2.01
YBX3-202ENST00000279550 NUTM2GQ5VZR2 741 aa27.58■■■□□ 2.01
YBX3-202ENST00000279550 DDX17Q92841 729 aaKnown RBP27.58■■■□□ 2.01
YBX3-202ENST00000279550 SLFN5Q08AF3 891 aa27.57■■■□□ 2
YBX3-202ENST00000279550 RUNDC1Q96C34 613 aa27.56■■■□□ 2
YBX3-202ENST00000279550 MARF1Q9Y4F3 1742 aaKnown RBP27.56■■■□□ 2
YBX3-202ENST00000279550 SPINK5Q9NQ38 1064 aaPredicted RBP27.55■■■□□ 2
YBX3-202ENST00000279550 B4GALNT3Q6L9W6 998 aa27.55■■■□□ 2
YBX3-202ENST00000279550 MAP2P11137 1827 aaKnown RBP27.54■■■□□ 2
YBX3-202ENST00000279550 RRS1Q15050 365 aaKnown RBP27.54■■■□□ 2
YBX3-202ENST00000279550 TRMT2AQ8IZ69 625 aaKnown RBP27.54■■■□□ 2
YBX3-202ENST00000279550 EMILIN1Q9Y6C2 1016 aa27.54■■■□□ 2
YBX3-202ENST00000279550 PNPLA6Q8IY17 1366 aa27.54■■■□□ 2
YBX3-202ENST00000279550 PXDNQ92626 1479 aa27.54■■■□□ 2
YBX3-202ENST00000279550 NGEFQ8N5V2 710 aa27.53■■■□□ 2
YBX3-202ENST00000279550 SBNO1A3KN83 1393 aa27.53■■■□□ 2
YBX3-202ENST00000279550 PPM1GO15355 546 aaPredicted RBP27.53■■■□□ 2
YBX3-202ENST00000279550 TSHZ2Q9NRE2 1034 aa27.53■■■□□ 2
YBX3-202ENST00000279550 SOX12O15370 315 aa27.51■■□□□ 1.99
YBX3-202ENST00000279550 U2AF1L5P0DN76 240 aaPredicted RBP27.51■■□□□ 1.99
YBX3-202ENST00000279550 U2AF1Q01081 240 aaKnown RBP eCLIP27.51■■□□□ 1.993e-16■■□□□ 13.9
YBX3-202ENST00000279550 TCP11L2Q8N4U5 519 aa27.51■■□□□ 1.99
YBX3-202ENST00000279550 CDK12Q9NYV4 1490 aaPredicted RBP27.51■■□□□ 1.99
YBX3-202ENST00000279550 RRP7AQ9Y3A4 280 aaKnown RBP27.5■■□□□ 1.99
YBX3-202ENST00000279550 ALS2Q96Q42 1657 aa27.5■■□□□ 1.99
YBX3-202ENST00000279550 LMOD2Q6P5Q4 547 aa27.5■■□□□ 1.99
YBX3-202ENST00000279550 WWC1Q8IX03 1113 aa27.48■■□□□ 1.99
YBX3-202ENST00000279550 TNS3Q68CZ2 1445 aa27.47■■□□□ 1.99
YBX3-202ENST00000279550 SOS2Q07890 1332 aaPredicted RBP27.46■■□□□ 1.99
YBX3-202ENST00000279550 PHF23Q9BUL5 403 aaPredicted RBP27.46■■□□□ 1.99
YBX3-202ENST00000279550 MAP3K19Q56UN5 1328 aa27.45■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms