RNA–Protein interactions for RNA: ENST00000277817.10

HERC4-201, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best) BASIC

Gene HERC4, Length 4,371 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-201ENST00000277817 IVNS1ABPQ9Y6Y0 642 aa4.18□□□□□ -1.74
HERC4-201ENST00000277817 GPATCH8Q9UKJ3 1502 aaKnown RBP4.18□□□□□ -1.74
HERC4-201ENST00000277817 BRD2P25440 801 aaKnown RBP4.18□□□□□ -1.74
HERC4-201ENST00000277817 RFC5P40937 340 aa4.18□□□□□ -1.74
HERC4-201ENST00000277817 MYSM1Q5VVJ2 828 aa4.18□□□□□ -1.74
HERC4-201ENST00000277817 CC2D2BQ6DHV5 1058 aa4.18□□□□□ -1.74
HERC4-201ENST00000277817 ALG2Q9H553 416 aa4.18□□□□□ -1.74
HERC4-201ENST00000277817 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP4.18□□□□□ -1.744e-7■■■□□ 16.8
HERC4-201ENST00000277817 KIAA1107Q9UPP5 1409 aa4.17□□□□□ -1.74
HERC4-201ENST00000277817 ZNF16P17020 682 aaPredicted RBP4.17□□□□□ -1.74
HERC4-201ENST00000277817 FBXO33Q7Z6M2 555 aa4.17□□□□□ -1.74
HERC4-201ENST00000277817 FBXW7Q969H0 707 aa4.17□□□□□ -1.74
HERC4-201ENST00000277817 AHDC1Q5TGY3 1603 aaPredicted RBP4.17□□□□□ -1.74
HERC4-201ENST00000277817 PLCH2O75038 1416 aa4.17□□□□□ -1.74
HERC4-201ENST00000277817 ABCA3Q99758 1704 aa4.17□□□□□ -1.74
HERC4-201ENST00000277817 RTEL1-TNFRSF6BF6WH68 1400 aa4.17□□□□□ -1.74
HERC4-201ENST00000277817 DUOX2Q9NRD8 1548 aa4.17□□□□□ -1.74
HERC4-201ENST00000277817 C1QBPQ07021 282 aaKnown RBP4.17□□□□□ -1.74
HERC4-201ENST00000277817 ECM1Q16610 540 aa4.17□□□□□ -1.74
HERC4-201ENST00000277817 UCN2Q96RP3 112 aa4.17□□□□□ -1.74
HERC4-201ENST00000277817 FAM217BQ9NTX9 383 aaPredicted RBP4.17□□□□□ -1.74
HERC4-201ENST00000277817 MED1Q15648 1581 aaPredicted RBP4.17□□□□□ -1.74
HERC4-201ENST00000277817 WNK3Q9BYP7 1800 aa4.17□□□□□ -1.74
HERC4-201ENST00000277817 ABCC3O15438 1527 aa4.16□□□□□ -1.74
HERC4-201ENST00000277817 TIAM1Q13009 1591 aa4.16□□□□□ -1.74
HERC4-201ENST00000277817 CCDC18Q5T9S5 1454 aa4.16□□□□□ -1.74
HERC4-201ENST00000277817 SHANK2Q9UPX8 1470 aa4.16□□□□□ -1.74
HERC4-201ENST00000277817 ZNF330Q9Y3S2 320 aaPredicted RBP4.16□□□□□ -1.74
HERC4-201ENST00000277817 ATP10AO60312 1499 aa4.16□□□□□ -1.74
HERC4-201ENST00000277817 UBE2Q2Q8WVN8 375 aa4.16□□□□□ -1.74
HERC4-201ENST00000277817 MRRFQ96E11 262 aaKnown RBP4.16□□□□□ -1.74
HERC4-201ENST00000277817 PCDHB8Q9UN66 801 aa4.16□□□□□ -1.74
HERC4-201ENST00000277817 PCDHB13Q9Y5F0 798 aa4.16□□□□□ -1.74
HERC4-201ENST00000277817 CNTLNQ9NXG0 1405 aa4.15□□□□□ -1.74
HERC4-201ENST00000277817 FAM69CQ0P6D2 419 aa4.15□□□□□ -1.74
HERC4-201ENST00000277817 PPP1R15BQ5SWA1 713 aa4.15□□□□□ -1.74
HERC4-201ENST00000277817 NRXN3Q9Y4C0 1643 aa4.15□□□□□ -1.74
HERC4-201ENST00000277817 FOXK1P85037 733 aa4.15□□□□□ -1.75
HERC4-201ENST00000277817 TTC13Q8NBP0 860 aa4.15□□□□□ -1.75
HERC4-201ENST00000277817 CARNS1A5YM72 827 aa4.15□□□□□ -1.75
HERC4-201ENST00000277817 DPYSL4O14531 572 aa4.15□□□□□ -1.75
HERC4-201ENST00000277817 FYCO1Q9BQS8 1478 aa4.14□□□□□ -1.75
HERC4-201ENST00000277817 CDK12Q9NYV4 1490 aaPredicted RBP4.14□□□□□ -1.75
HERC4-201ENST00000277817 TCF3P15923 654 aa4.14□□□□□ -1.75
HERC4-201ENST00000277817 GJA5P36382 358 aa4.14□□□□□ -1.75
HERC4-201ENST00000277817 DRC1Q96MC2 740 aa4.14□□□□□ -1.75
HERC4-201ENST00000277817 ATP7AQ04656 1500 aa4.14□□□□□ -1.75
HERC4-201ENST00000277817 CDK13Q14004 1512 aaKnown RBP4.14□□□□□ -1.75
HERC4-201ENST00000277817 RECKO95980 971 aa4.14□□□□□ -1.75
HERC4-201ENST00000277817 CEP152O94986 1710 aa4.14□□□□□ -1.75
HERC4-201ENST00000277817 ARHGAP31Q2M1Z3 1444 aa4.14□□□□□ -1.75
HERC4-201ENST00000277817 ITGAEP38570 1179 aa4.14□□□□□ -1.75
HERC4-201ENST00000277817 TMEM121BQ9BXQ6 578 aaPredicted RBP4.14□□□□□ -1.75
HERC4-201ENST00000277817 QRICH2Q9H0J4 1663 aa4.13□□□□□ -1.75
HERC4-201ENST00000277817 TMEM259Q4ZIN3 620 aa4.13□□□□□ -1.75
HERC4-201ENST00000277817 SREK1Q8WXA9 508 aaKnown RBP4.13□□□□□ -1.75
HERC4-201ENST00000277817 TBC1D2Q9BYX2 928 aa4.13□□□□□ -1.75
HERC4-201ENST00000277817 COL16A1Q07092 1604 aaPredicted RBP4.13□□□□□ -1.75
HERC4-201ENST00000277817 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP4.13□□□□□ -1.75
HERC4-201ENST00000277817 FCHSD2O94868 740 aa4.13□□□□□ -1.75
HERC4-201ENST00000277817 RREB1Q92766 1687 aa4.13□□□□□ -1.75
HERC4-201ENST00000277817 PTPRGP23470 1445 aa4.13□□□□□ -1.75
HERC4-201ENST00000277817 LRRC7Q96NW7 1537 aa4.13□□□□□ -1.75
HERC4-201ENST00000277817 IFNL1Q8IU54 200 aa4.13□□□□□ -1.75
HERC4-201ENST00000277817 PPP1R12CQ9BZL4 782 aa4.13□□□□□ -1.75
HERC4-201ENST00000277817 DSG2Q14126 1118 aa4.12□□□□□ -1.75
HERC4-201ENST00000277817 KANK4Q5T7N3 995 aaPredicted RBP4.12□□□□□ -1.75
HERC4-201ENST00000277817 ZMIZ1Q9ULJ6 1067 aa4.12□□□□□ -1.75
HERC4-201ENST00000277817 CARMIL1Q5VZK9 1371 aa4.12□□□□□ -1.75
HERC4-201ENST00000277817 CERS3Q8IU89 383 aa4.12□□□□□ -1.75
HERC4-201ENST00000277817 TSPYL2Q9H2G4 693 aaPredicted RBP4.12□□□□□ -1.75
HERC4-201ENST00000277817 VRTNQ9H8Y1 702 aa4.12□□□□□ -1.75
HERC4-201ENST00000277817 GPCPD1Q9NPB8 672 aa4.12□□□□□ -1.75
HERC4-201ENST00000277817 GIMAP6Q6P9H5 292 aa4.11□□□□□ -1.75
HERC4-201ENST00000277817 MBD5Q9P267 1494 aa4.11□□□□□ -1.75
HERC4-201ENST00000277817 RAD51AP2Q09MP3 1159 aa4.11□□□□□ -1.75
HERC4-201ENST00000277817 JPH4Q96JJ6 628 aa4.11□□□□□ -1.75
HERC4-201ENST00000277817 CWC22Q9HCG8 908 aaKnown RBP4.11□□□□□ -1.75
HERC4-201ENST00000277817 NCOA3Q9Y6Q9 1424 aa4.11□□□□□ -1.75
HERC4-201ENST00000277817 CICQ96RK0 1608 aaPredicted RBP4.11□□□□□ -1.75
HERC4-201ENST00000277817 PZPP20742 1482 aa4.11□□□□□ -1.75
HERC4-201ENST00000277817 NALCNQ8IZF0 1738 aa4.11□□□□□ -1.75
HERC4-201ENST00000277817 PTPRKQ15262 1439 aa4.11□□□□□ -1.75
HERC4-201ENST00000277817 LRP6O75581 1613 aa4.11□□□□□ -1.75
HERC4-201ENST00000277817 MRPL58Q14197 206 aaKnown RBP4.11□□□□□ -1.75
HERC4-201ENST00000277817 ANO8Q9HCE9 1232 aaPredicted RBP4.11□□□□□ -1.75
HERC4-201ENST00000277817 SLC52A1Q9NWF4 448 aa4.11□□□□□ -1.75
HERC4-201ENST00000277817 LIMD1Q9UGP4 676 aa4.11□□□□□ -1.75
HERC4-201ENST00000277817 USP35Q9P2H5 1018 aa4.1□□□□□ -1.75
HERC4-201ENST00000277817 TRPM1Q7Z4N2 1603 aa4.1□□□□□ -1.75
HERC4-201ENST00000277817 A2ML1A8K2U0 1454 aa4.1□□□□□ -1.75
HERC4-201ENST00000277817 LILRB3O75022 631 aa4.1□□□□□ -1.75
HERC4-201ENST00000277817 SSTR3P32745 418 aaPredicted RBP4.1□□□□□ -1.75
HERC4-201ENST00000277817 LARGE2Q8N3Y3 721 aa4.1□□□□□ -1.75
HERC4-201ENST00000277817 TRIM34Q9BYJ4 488 aa4.1□□□□□ -1.75
HERC4-201ENST00000277817 TMED8Q6PL24 325 aaPredicted RBP4.1□□□□□ -1.75
HERC4-201ENST00000277817 FBXO41Q8TF61 875 aa4.1□□□□□ -1.75
HERC4-201ENST00000277817 UBXN4Q92575 508 aa4.1□□□□□ -1.75
HERC4-201ENST00000277817 GDPD2Q9HCC8 539 aa4.1□□□□□ -1.75
HERC4-201ENST00000277817 ACIN1Q9UKV3 1341 aaKnown RBP4.1□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms