RNA–Protein interactions for RNA: ENST00000276052.10

CDK16-201, Transcript of cyclin dependent kinase 16, humanhuman

TSL 2 BASIC

Gene CDK16, Length 3,016 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK16-201ENST00000276052 CCDC61Q9Y6R9 512 aa17.13■□□□□ 0.33
CDK16-201ENST00000276052 POLR3AO14802 1390 aaPredicted RBP17.13■□□□□ 0.33
CDK16-201ENST00000276052 NUTM2GQ5VZR2 741 aa17.13■□□□□ 0.33
CDK16-201ENST00000276052 SKAP1Q86WV1 359 aa17.12■□□□□ 0.33
CDK16-201ENST00000276052 TECPR2O15040 1411 aa17.11■□□□□ 0.33
CDK16-201ENST00000276052 MSH5O43196 834 aa17.1■□□□□ 0.33
CDK16-201ENST00000276052 ACEP12821 1306 aa17.1■□□□□ 0.33
CDK16-201ENST00000276052 FAM135BQ49AJ0 1406 aa17.1■□□□□ 0.33
CDK16-201ENST00000276052 CPS1P31327 1500 aa17.1■□□□□ 0.33
CDK16-201ENST00000276052 BCAR3O75815 825 aa17.1■□□□□ 0.33
CDK16-201ENST00000276052 PUS7Q96PZ0 661 aaKnown RBP17.1■□□□□ 0.33
CDK16-201ENST00000276052 WWC1Q8IX03 1113 aa17.09■□□□□ 0.33
CDK16-201ENST00000276052 TCP11L2Q8N4U5 519 aa17.09■□□□□ 0.33
CDK16-201ENST00000276052 U2AF1L5P0DN76 240 aaPredicted RBP17.08■□□□□ 0.33
CDK16-201ENST00000276052 U2AF1Q01081 240 aaKnown RBP eCLIP17.08■□□□□ 0.33
CDK16-201ENST00000276052 RRS1Q15050 365 aaKnown RBP17.08■□□□□ 0.33
CDK16-201ENST00000276052 XPCQ01831 940 aaPredicted RBP17.08■□□□□ 0.32
CDK16-201ENST00000276052 TRMT2AQ8IZ69 625 aaKnown RBP17.08■□□□□ 0.32
CDK16-201ENST00000276052 ATP7BP35670 1465 aa17.07■□□□□ 0.32
CDK16-201ENST00000276052 U2SURPO15042 1029 aaKnown RBP17.07■□□□□ 0.32
CDK16-201ENST00000276052 CFAP53Q96M91 514 aa17.07■□□□□ 0.32
CDK16-201ENST00000276052 EMILIN1Q9Y6C2 1016 aa17.07■□□□□ 0.32
CDK16-201ENST00000276052 NPHP4O75161 1426 aaPredicted RBP17.06■□□□□ 0.32
CDK16-201ENST00000276052 NGDNQ8NEJ9 315 aaKnown RBP17.06■□□□□ 0.32
CDK16-201ENST00000276052 RUNDC1Q96C34 613 aa17.06■□□□□ 0.32
CDK16-201ENST00000276052 RGPD8O14715 1765 aaPredicted RBP17.06■□□□□ 0.32
CDK16-201ENST00000276052 NKTRP30414 1462 aaKnown RBP17.05■□□□□ 0.32
CDK16-201ENST00000276052 KNDC1Q76NI1 1749 aa17.05■□□□□ 0.32
CDK16-201ENST00000276052 E9PSI1 815 aa17.05■□□□□ 0.32
CDK16-201ENST00000276052 PAK3O75914 559 aaPredicted RBP17.04■□□□□ 0.32
CDK16-201ENST00000276052 SIRT1Q96EB6 747 aa17.04■□□□□ 0.32
CDK16-201ENST00000276052 SHPRHQ149N8 1683 aa17.03■□□□□ 0.32
CDK16-201ENST00000276052 ZNF142P52746 1687 aaPredicted RBP17.03■□□□□ 0.32
CDK16-201ENST00000276052 PROSER2Q86WR7 435 aaPredicted RBP17.02■□□□□ 0.32
CDK16-201ENST00000276052 NINLQ9Y2I6 1382 aa17.01■□□□□ 0.31
CDK16-201ENST00000276052 CPSF1Q10570 1443 aaKnown RBP17.01■□□□□ 0.31
CDK16-201ENST00000276052 ESCO1Q5FWF5 840 aa17.01■□□□□ 0.31
CDK16-201ENST00000276052 DDX17Q92841 729 aaKnown RBP17■□□□□ 0.31
CDK16-201ENST00000276052 ORAI2Q96SN7 254 aa17■□□□□ 0.31
CDK16-201ENST00000276052 DIP2AQ14689 1571 aa17■□□□□ 0.31
CDK16-201ENST00000276052 POLKQ9UBT6 870 aa16.99■□□□□ 0.31
CDK16-201ENST00000276052 FANCIQ9NVI1 1328 aa16.99■□□□□ 0.31
CDK16-201ENST00000276052 NSD2O96028 1365 aa16.99■□□□□ 0.31
CDK16-201ENST00000276052 USP32Q8NFA0 1604 aa16.99■□□□□ 0.31
CDK16-201ENST00000276052 PTCH1Q13635 1447 aa16.99■□□□□ 0.31
CDK16-201ENST00000276052 COG3Q96JB2 828 aa16.99■□□□□ 0.31
CDK16-201ENST00000276052 TTC21BQ7Z4L5 1316 aa16.99■□□□□ 0.31
CDK16-201ENST00000276052 XRN1Q8IZH2 1706 aaKnown RBP16.98■□□□□ 0.31
CDK16-201ENST00000276052 BCL2L13Q9BXK5 485 aa16.98■□□□□ 0.31
CDK16-201ENST00000276052 HMOX1P09601 288 aa16.98■□□□□ 0.31
CDK16-201ENST00000276052 LMOD2Q6P5Q4 547 aa16.97■□□□□ 0.31
CDK16-201ENST00000276052 ZBTB7CA1YPR0 619 aa16.97■□□□□ 0.31
CDK16-201ENST00000276052 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.97■□□□□ 0.31
CDK16-201ENST00000276052 FRAT1Q92837 279 aaPredicted RBP16.97■□□□□ 0.31
CDK16-201ENST00000276052 FOXO3O43524 673 aa16.96■□□□□ 0.31
CDK16-201ENST00000276052 CHD2O14647 1828 aaKnown RBP16.96■□□□□ 0.31
CDK16-201ENST00000276052 CDC42BPGQ6DT37 1551 aa16.96■□□□□ 0.31
CDK16-201ENST00000276052 ANP32EQ9BTT0 268 aa16.96■□□□□ 0.3
CDK16-201ENST00000276052 EDC4Q6P2E9 1401 aaKnown RBP16.96■□□□□ 0.3
CDK16-201ENST00000276052 PLEKHG3A1L390 1219 aa16.95■□□□□ 0.3
CDK16-201ENST00000276052 NALCNQ8IZF0 1738 aa16.94■□□□□ 0.3
CDK16-201ENST00000276052 PANK1Q8TE04 598 aa16.94■□□□□ 0.3
CDK16-201ENST00000276052 NGEFQ8N5V2 710 aa16.94■□□□□ 0.3
CDK16-201ENST00000276052 PLEKHF1Q96S99 279 aa16.94■□□□□ 0.3
CDK16-201ENST00000276052 TNNQ9UQP3 1299 aa16.94■□□□□ 0.3
CDK16-201ENST00000276052 TSR2Q969E8 191 aaKnown RBP16.94■□□□□ 0.3
CDK16-201ENST00000276052 PHF23Q9BUL5 403 aaPredicted RBP16.94■□□□□ 0.3
CDK16-201ENST00000276052 CANXP27824 592 aaKnown RBP16.93■□□□□ 0.3
CDK16-201ENST00000276052 ZNF692Q9BU19 519 aaPredicted RBP16.93■□□□□ 0.3
CDK16-201ENST00000276052 IQSEC2Q5JU85 1478 aa16.93■□□□□ 0.3
CDK16-201ENST00000276052 USP6P35125 1406 aa16.93■□□□□ 0.3
CDK16-201ENST00000276052 KIF20BQ96Q89 1820 aa16.93■□□□□ 0.3
CDK16-201ENST00000276052 NLRP6P59044 892 aa16.93■□□□□ 0.3
CDK16-201ENST00000276052 DIAPH1O60610 1272 aaKnown RBP16.92■□□□□ 0.3
CDK16-201ENST00000276052 PHF8Q9UPP1 1060 aa16.92■□□□□ 0.3
CDK16-201ENST00000276052 COG6Q9Y2V7 657 aa16.92■□□□□ 0.3
CDK16-201ENST00000276052 WDR63Q8IWG1 891 aa16.91■□□□□ 0.3
CDK16-201ENST00000276052 ABTB2Q8N961 1025 aa16.91■□□□□ 0.3
CDK16-201ENST00000276052 MAP2P11137 1827 aaKnown RBP16.91■□□□□ 0.3
CDK16-201ENST00000276052 ITSN1Q15811 1721 aa16.91■□□□□ 0.3
CDK16-201ENST00000276052 ADGRB2O60241 1585 aa16.91■□□□□ 0.3
CDK16-201ENST00000276052 TMPOP42166 694 aaKnown RBP16.91■□□□□ 0.3
CDK16-201ENST00000276052 ZNF335Q9H4Z2 1342 aaPredicted RBP16.91■□□□□ 0.3
CDK16-201ENST00000276052 PIK3R4Q99570 1358 aa16.91■□□□□ 0.3
CDK16-201ENST00000276052 RARSP54136 660 aaKnown RBP16.91■□□□□ 0.3
CDK16-201ENST00000276052 HSP90AB2PQ58FF8 381 aa16.91■□□□□ 0.3
CDK16-201ENST00000276052 NPM2Q86SE8 214 aaKnown RBP16.91■□□□□ 0.3
CDK16-201ENST00000276052 TCERG1O14776 1098 aaKnown RBP16.9■□□□□ 0.3
CDK16-201ENST00000276052 TMEM94Q12767 1356 aa16.9■□□□□ 0.3
CDK16-201ENST00000276052 PDE4AP27815 886 aa16.89■□□□□ 0.29
CDK16-201ENST00000276052 PSME1Q06323 249 aa16.89■□□□□ 0.29
CDK16-201ENST00000276052 CLUAP1Q96AJ1 413 aa16.89■□□□□ 0.29
CDK16-201ENST00000276052 TRIM35Q9UPQ4 493 aa16.89■□□□□ 0.29
CDK16-201ENST00000276052 LTV1Q96GA3 475 aaPredicted RBP16.89■□□□□ 0.29
CDK16-201ENST00000276052 KDM2BQ8NHM5 1336 aa16.89■□□□□ 0.29
CDK16-201ENST00000276052 MAPK8IP3Q9UPT6 1336 aa16.89■□□□□ 0.29
CDK16-201ENST00000276052 LMTK3Q96Q04 1460 aa16.89■□□□□ 0.29
CDK16-201ENST00000276052 RIPK4P57078 832 aa16.88■□□□□ 0.29
CDK16-201ENST00000276052 CCDC27Q2M243 656 aa16.88■□□□□ 0.29
CDK16-201ENST00000276052 AEBP1Q8IUX7 1158 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 73.8 ms