RNA–Protein interactions for RNA: ENST00000274695.8

CDKAL1-201, Transcript of CDK5 regulatory subunit associated protein 1 like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDKAL1, Length 3,272 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKAL1-201ENST00000274695 PPP1R12CQ9BZL4 782 aa8.28□□□□□ -1.08
CDKAL1-201ENST00000274695 IFT172Q9UG01 1749 aa8.28□□□□□ -1.08
CDKAL1-201ENST00000274695 ABCC2Q92887 1545 aa8.28□□□□□ -1.08
CDKAL1-201ENST00000274695 BRD2P25440 801 aaKnown RBP8.28□□□□□ -1.08
CDKAL1-201ENST00000274695 CHADLQ6NUI6 762 aa8.28□□□□□ -1.08
CDKAL1-201ENST00000274695 SPATA32Q96LK8 384 aa8.28□□□□□ -1.08
CDKAL1-201ENST00000274695 CDHR5Q9HBB8 845 aa8.27□□□□□ -1.09
CDKAL1-201ENST00000274695 GNEQ9Y223 722 aaKnown RBP8.27□□□□□ -1.09
CDKAL1-201ENST00000274695 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.27□□□□□ -1.094e-7■■■□□ 15.6
CDKAL1-201ENST00000274695 HSPA5P11021 654 aaKnown RBP8.27□□□□□ -1.09
CDKAL1-201ENST00000274695 GPR37L1O60883 481 aa8.26□□□□□ -1.09
CDKAL1-201ENST00000274695 TCF3P15923 654 aa8.26□□□□□ -1.09
CDKAL1-201ENST00000274695 SAMD9LQ8IVG5 1584 aa8.26□□□□□ -1.09
CDKAL1-201ENST00000274695 PALM3A6NDB9 673 aaPredicted RBP8.25□□□□□ -1.09
CDKAL1-201ENST00000274695 NEFLP07196 543 aa8.25□□□□□ -1.09
CDKAL1-201ENST00000274695 UCN2Q96RP3 112 aa8.25□□□□□ -1.09
CDKAL1-201ENST00000274695 NPDC1Q9NQX5 325 aaPredicted RBP8.25□□□□□ -1.09
CDKAL1-201ENST00000274695 CCDC144AA2RUR9 1427 aa8.25□□□□□ -1.09
CDKAL1-201ENST00000274695 PPP2R2DQ66LE6 453 aa8.25□□□□□ -1.09
CDKAL1-201ENST00000274695 TBC1D2Q9BYX2 928 aa8.25□□□□□ -1.09
CDKAL1-201ENST00000274695 COL17A1Q9UMD9 1497 aaPredicted RBP8.25□□□□□ -1.09
CDKAL1-201ENST00000274695 KIF7Q2M1P5 1343 aa8.25□□□□□ -1.09
CDKAL1-201ENST00000274695 SYNMO15061 1565 aa8.24□□□□□ -1.09
CDKAL1-201ENST00000274695 LMOD1P29536 600 aaPredicted RBP8.24□□□□□ -1.09
CDKAL1-201ENST00000274695 EIF4G2P78344 907 aaKnown RBP eCLIP8.24□□□□□ -1.09
CDKAL1-201ENST00000274695 SIRT1Q96EB6 747 aa8.24□□□□□ -1.09
CDKAL1-201ENST00000274695 BRD4O60885 1362 aaPredicted RBP8.24□□□□□ -1.09
CDKAL1-201ENST00000274695 CCDC141Q6ZP82 1450 aa8.24□□□□□ -1.09
CDKAL1-201ENST00000274695 ARAP3Q8WWN8 1544 aa8.24□□□□□ -1.09
CDKAL1-201ENST00000274695 DUOX2Q9NRD8 1548 aa8.24□□□□□ -1.09
CDKAL1-201ENST00000274695 ZC3H13Q5T200 1668 aaKnown RBP8.24□□□□□ -1.09
CDKAL1-201ENST00000274695 MADDQ8WXG6 1647 aa8.24□□□□□ -1.09
CDKAL1-201ENST00000274695 PHLDB3Q6NSJ2 640 aa8.24□□□□□ -1.09
CDKAL1-201ENST00000274695 DRC1Q96MC2 740 aa8.24□□□□□ -1.09
CDKAL1-201ENST00000274695 MPHOSPH9Q99550 1183 aa8.24□□□□□ -1.09
CDKAL1-201ENST00000274695 USP32Q8NFA0 1604 aa8.24□□□□□ -1.09
CDKAL1-201ENST00000274695 VWDEQ8N2E2 1590 aa8.24□□□□□ -1.09
CDKAL1-201ENST00000274695 PARD3Q8TEW0 1356 aa8.23□□□□□ -1.09
CDKAL1-201ENST00000274695 TMEM259Q4ZIN3 620 aa8.23□□□□□ -1.09
CDKAL1-201ENST00000274695 C11orf95C9JLR9 678 aaPredicted RBP8.23□□□□□ -1.09
CDKAL1-201ENST00000274695 FOXK1P85037 733 aa8.23□□□□□ -1.09
CDKAL1-201ENST00000274695 PPRC1Q5VV67 1664 aaKnown RBP8.22□□□□□ -1.09
CDKAL1-201ENST00000274695 FAM50AQ14320 339 aaKnown RBP8.22□□□□□ -1.09
CDKAL1-201ENST00000274695 SREK1Q8WXA9 508 aaKnown RBP8.22□□□□□ -1.09
CDKAL1-201ENST00000274695 QPCTQ16769 361 aa8.21□□□□□ -1.1
CDKAL1-201ENST00000274695 UPF1Q92900 1129 aaKnown RBP eCLIP8.21□□□□□ -1.1
CDKAL1-201ENST00000274695 FAM135AQ9P2D6 1515 aa8.21□□□□□ -1.1
CDKAL1-201ENST00000274695 NBPF8Q3BBV2 869 aa8.21□□□□□ -1.1
CDKAL1-201ENST00000274695 GJD4Q96KN9 370 aaPredicted RBP8.21□□□□□ -1.1
CDKAL1-201ENST00000274695 PPP1R1BQ9UD71 204 aaPredicted RBP8.21□□□□□ -1.1
CDKAL1-201ENST00000274695 WASHC2CQ9Y4E1 1318 aa8.2□□□□□ -1.1
CDKAL1-201ENST00000274695 KDM4AO75164 1064 aa8.2□□□□□ -1.1
CDKAL1-201ENST00000274695 MAP3K9P80192 1104 aa8.2□□□□□ -1.1
CDKAL1-201ENST00000274695 CERS3Q8IU89 383 aa8.2□□□□□ -1.1
CDKAL1-201ENST00000274695 PLPP6Q8IY26 295 aa8.2□□□□□ -1.1
CDKAL1-201ENST00000274695 GIPC2Q8TF65 315 aa8.2□□□□□ -1.1
CDKAL1-201ENST00000274695 KIF12Q96FN5 646 aa8.2□□□□□ -1.1
CDKAL1-201ENST00000274695 TFIP11Q9UBB9 837 aaKnown RBP8.2□□□□□ -1.1
CDKAL1-201ENST00000274695 INO80Q9ULG1 1556 aaPredicted RBP8.2□□□□□ -1.1
CDKAL1-201ENST00000274695 PRAG1Q86YV5 1406 aa8.2□□□□□ -1.1
CDKAL1-201ENST00000274695 TAGLNQ01995 201 aaKnown RBP8.2□□□□□ -1.1
CDKAL1-201ENST00000274695 VAC14Q08AM6 782 aa8.2□□□□□ -1.1
CDKAL1-201ENST00000274695 REM2Q8IYK8 340 aaPredicted RBP8.2□□□□□ -1.1
CDKAL1-201ENST00000274695 L3MBTL2Q969R5 705 aa8.2□□□□□ -1.1
CDKAL1-201ENST00000274695 BCL2L13Q9BXK5 485 aa8.2□□□□□ -1.1
CDKAL1-201ENST00000274695 GIMAP6Q6P9H5 292 aa8.19□□□□□ -1.1
CDKAL1-201ENST00000274695 ZNF662Q6ZS27 426 aa8.19□□□□□ -1.1
CDKAL1-201ENST00000274695 WWC1Q8IX03 1113 aa8.19□□□□□ -1.1
CDKAL1-201ENST00000274695 ATG7O95352 703 aa8.19□□□□□ -1.1
CDKAL1-201ENST00000274695 PTGER2P43116 358 aa8.19□□□□□ -1.1
CDKAL1-201ENST00000274695 NUDCQ9Y266 331 aa8.19□□□□□ -1.1
CDKAL1-201ENST00000274695 CSPP1Q1MSJ5 1256 aa8.18□□□□□ -1.1
CDKAL1-201ENST00000274695 TDRD9Q8NDG6 1382 aaKnown RBP8.18□□□□□ -1.1
CDKAL1-201ENST00000274695 KIF15Q9NS87 1388 aa8.18□□□□□ -1.1
CDKAL1-201ENST00000274695 USP47Q96K76 1375 aa8.18□□□□□ -1.1
CDKAL1-201ENST00000274695 CCDC184Q52MB2 194 aa8.17□□□□□ -1.1
CDKAL1-201ENST00000274695 WDR7Q9Y4E6 1490 aa8.17□□□□□ -1.1
CDKAL1-201ENST00000274695 ZMYM3Q14202 1370 aa8.17□□□□□ -1.1
CDKAL1-201ENST00000274695 PLA2R1Q13018 1463 aa8.16□□□□□ -1.1
CDKAL1-201ENST00000274695 PNISRQ8TF01 805 aaKnown RBP8.16□□□□□ -1.1
CDKAL1-201ENST00000274695 STK32AQ8WU08 396 aa8.16□□□□□ -1.1
CDKAL1-201ENST00000274695 TRIM52Q96A61 297 aa8.16□□□□□ -1.1
CDKAL1-201ENST00000274695 C8orf37Q96NL8 207 aa8.16□□□□□ -1.1
CDKAL1-201ENST00000274695 SLAIN2Q9P270 581 aa8.16□□□□□ -1.1
CDKAL1-201ENST00000274695 TRPM2O94759 1503 aa8.16□□□□□ -1.1
CDKAL1-201ENST00000274695 AP1G2O75843 785 aa8.16□□□□□ -1.1
CDKAL1-201ENST00000274695 METTL3Q86U44 580 aaKnown RBP8.16□□□□□ -1.1
CDKAL1-201ENST00000274695 ZMIZ1Q9ULJ6 1067 aa8.16□□□□□ -1.1
CDKAL1-201ENST00000274695 TTC37Q6PGP7 1564 aa8.16□□□□□ -1.1
CDKAL1-201ENST00000274695 NPC1L1Q9UHC9 1359 aa8.16□□□□□ -1.1
CDKAL1-201ENST00000274695 SCAPERQ9BY12 1400 aa8.16□□□□□ -1.1
CDKAL1-201ENST00000274695 DPY19L2Q6NUT2 758 aa8.16□□□□□ -1.1
CDKAL1-201ENST00000274695 ALG2Q9H553 416 aa8.16□□□□□ -1.1
CDKAL1-201ENST00000274695 HMX1Q9NP08 348 aaPredicted RBP8.16□□□□□ -1.1
CDKAL1-201ENST00000274695 ANKRD50Q9ULJ7 1429 aa8.15□□□□□ -1.1
CDKAL1-201ENST00000274695 TET3O43151 1660 aa8.15□□□□□ -1.1
CDKAL1-201ENST00000274695 SHPRHQ149N8 1683 aa8.15□□□□□ -1.1
CDKAL1-201ENST00000274695 RIC3Q7Z5B4 369 aa8.15□□□□□ -1.1
CDKAL1-201ENST00000274695 C9orf84Q5VXU9 1444 aa8.15□□□□□ -1.1
CDKAL1-201ENST00000274695 ABCA6Q8N139 1617 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms