RNA–Protein interactions for RNA: ENST00000270066.10

SMG9-201, Transcript of SMG9, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG9, Length 5,510 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG9-201ENST00000270066 KLHL34Q8N239 644 aa16.07■□□□□ 0.16
SMG9-201ENST00000270066 EXOSC9Q06265 439 aaKnown RBP16.07■□□□□ 0.16
SMG9-201ENST00000270066 FAM13BQ9NYF5 915 aa16.07■□□□□ 0.16
SMG9-201ENST00000270066 BRPF3Q9ULD4 1205 aa16.07■□□□□ 0.16
SMG9-201ENST00000270066 TBC1D2BQ9UPU7 963 aa16.07■□□□□ 0.16
SMG9-201ENST00000270066 SMC3Q9UQE7 1217 aa16.07■□□□□ 0.16
SMG9-201ENST00000270066 SAFBQ15424 915 aaKnown RBP eCLIP16.06■□□□□ 0.16
SMG9-201ENST00000270066 SLC26A8Q96RN1 970 aa16.06■□□□□ 0.16
SMG9-201ENST00000270066 BICRAQ9NZM4 1560 aa16.06■□□□□ 0.16
SMG9-201ENST00000270066 CCDC27Q2M243 656 aa16.06■□□□□ 0.16
SMG9-201ENST00000270066 CAMSAP2Q08AD1 1489 aa16.06■□□□□ 0.16
SMG9-201ENST00000270066 PHF23Q9BUL5 403 aaPredicted RBP16.06■□□□□ 0.16
SMG9-201ENST00000270066 PCF11O94913 1555 aaKnown RBP16.06■□□□□ 0.16
SMG9-201ENST00000270066 NBPF8Q3BBV2 869 aa16.06■□□□□ 0.16
SMG9-201ENST00000270066 FOXD4L6Q3SYB3 417 aaPredicted RBP16.05■□□□□ 0.16
SMG9-201ENST00000270066 ZNF530Q6P9A1 599 aaPredicted RBP16.05■□□□□ 0.16
SMG9-201ENST00000270066 FOXD4L3Q6VB84 417 aaPredicted RBP16.05■□□□□ 0.16
SMG9-201ENST00000270066 CT47B1P0C2W7 299 aaPredicted RBP16.05■□□□□ 0.16
SMG9-201ENST00000270066 PRKCSHP14314 528 aaPredicted RBP16.05■□□□□ 0.16
SMG9-201ENST00000270066 PSMA5P28066 241 aa16.05■□□□□ 0.16
SMG9-201ENST00000270066 HIP1O00291 1037 aa16.05■□□□□ 0.16
SMG9-201ENST00000270066 ADGRL1O94910 1474 aa16.04■□□□□ 0.16
SMG9-201ENST00000270066 SURF6O75683 361 aaKnown RBP16.04■□□□□ 0.16
SMG9-201ENST00000270066 NFKBIBQ15653 356 aa16.04■□□□□ 0.16
SMG9-201ENST00000270066 ANKRD20A12PQ8NF67 263 aa16.04■□□□□ 0.16
SMG9-201ENST00000270066 FSD1Q9BTV5 496 aa16.04■□□□□ 0.16
SMG9-201ENST00000270066 CHMP5Q9NZZ3 219 aa16.04■□□□□ 0.16
SMG9-201ENST00000270066 NUCB2P80303 420 aa16.04■□□□□ 0.16
SMG9-201ENST00000270066 HDGFL1Q5TGJ6 251 aa16.04■□□□□ 0.16
SMG9-201ENST00000270066 GNAI2P04899 355 aa16.03■□□□□ 0.16
SMG9-201ENST00000270066 WDR63Q8IWG1 891 aa16.03■□□□□ 0.16
SMG9-201ENST00000270066 CWC22Q9HCG8 908 aaKnown RBP16.03■□□□□ 0.16
SMG9-201ENST00000270066 CCT4P50991 539 aaKnown RBP16.03■□□□□ 0.16
SMG9-201ENST00000270066 C22orf23Q9BZE7 217 aa16.02■□□□□ 0.16
SMG9-201ENST00000270066 BICD2Q8TD16 824 aa16.02■□□□□ 0.16
SMG9-201ENST00000270066 GOLGA6L1Q8N7Z2 621 aa16.02■□□□□ 0.16
SMG9-201ENST00000270066 BRMS1Q9HCU9 246 aa16.02■□□□□ 0.15
SMG9-201ENST00000270066 PRDM11Q9NQV5 511 aa16.02■□□□□ 0.15
SMG9-201ENST00000270066 VPS37CA5D8V6 355 aaPredicted RBP16.02■□□□□ 0.15
SMG9-201ENST00000270066 PDE3AQ14432 1141 aa16.02■□□□□ 0.15
SMG9-201ENST00000270066 GCC1Q96CN9 775 aa16.02■□□□□ 0.15
SMG9-201ENST00000270066 PTPN23Q9H3S7 1636 aa16.01■□□□□ 0.15
SMG9-201ENST00000270066 FYB1O15117 783 aa16.01■□□□□ 0.15
SMG9-201ENST00000270066 A0A0U1RQG5 324 aaPredicted RBP16.01■□□□□ 0.15
SMG9-201ENST00000270066 XBP1P17861 261 aa16.01■□□□□ 0.15
SMG9-201ENST00000270066 CCDC43Q96MW1 224 aaKnown RBP16.01■□□□□ 0.15
SMG9-201ENST00000270066 NUTM2BA6NNL0 878 aaPredicted RBP16■□□□□ 0.15
SMG9-201ENST00000270066 NUTM2EB1AL46 878 aaPredicted RBP16■□□□□ 0.15
SMG9-201ENST00000270066 SF3B2Q13435 895 aaKnown RBP16■□□□□ 0.15
SMG9-201ENST00000270066 SART3Q15020 963 aaKnown RBP16■□□□□ 0.15
SMG9-201ENST00000270066 NUTM2AQ8IVF1 878 aaPredicted RBP16■□□□□ 0.15
SMG9-201ENST00000270066 GNL3LQ9NVN8 582 aaKnown RBP16■□□□□ 0.15
SMG9-201ENST00000270066 PLB1Q6P1J6 1458 aa16■□□□□ 0.15
SMG9-201ENST00000270066 SLC4A2P04920 1241 aa16■□□□□ 0.15
SMG9-201ENST00000270066 KCNH5Q8NCM2 988 aa16■□□□□ 0.15
SMG9-201ENST00000270066 NAIPQ13075 1403 aa16■□□□□ 0.15
SMG9-201ENST00000270066 FAM177BA6PVY3 158 aa16■□□□□ 0.15
SMG9-201ENST00000270066 HMGB2P26583 209 aaKnown RBP15.99■□□□□ 0.15
SMG9-201ENST00000270066 DDX54Q8TDD1 881 aaKnown RBP15.99■□□□□ 0.15
SMG9-201ENST00000270066 NUDT16Q96DE0 195 aaKnown RBP15.99■□□□□ 0.15
SMG9-201ENST00000270066 SLC3A2P08195 630 aaKnown RBP15.99■□□□□ 0.15
SMG9-201ENST00000270066 CNNM1Q9NRU3 951 aa15.99■□□□□ 0.15
SMG9-201ENST00000270066 CCDC61Q9Y6R9 512 aa15.99■□□□□ 0.15
SMG9-201ENST00000270066 CCDC158Q5M9N0 1113 aa15.99■□□□□ 0.15
SMG9-201ENST00000270066 NOB1Q9ULX3 412 aaKnown RBP15.99■□□□□ 0.15
SMG9-201ENST00000270066 CDCA7LQ96GN5 454 aa15.98■□□□□ 0.15
SMG9-201ENST00000270066 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.98■□□□□ 0.15
SMG9-201ENST00000270066 PKNOX2Q96KN3 472 aa15.98■□□□□ 0.15
SMG9-201ENST00000270066 DNAJC2Q99543 621 aaKnown RBP15.98■□□□□ 0.15
SMG9-201ENST00000270066 FCHSD2O94868 740 aa15.98■□□□□ 0.15
SMG9-201ENST00000270066 PDE4CQ08493 712 aa15.98■□□□□ 0.15
SMG9-201ENST00000270066 TTC39AQ5SRH9 613 aa15.98■□□□□ 0.15
SMG9-201ENST00000270066 PCMTD1Q96MG8 357 aaPredicted RBP15.98■□□□□ 0.15
SMG9-201ENST00000270066 SRCIN1Q9C0H9 1055 aa15.98■□□□□ 0.15
SMG9-201ENST00000270066 DCAF8L1A6NGE4 600 aa15.97■□□□□ 0.15
SMG9-201ENST00000270066 CCDC73Q6ZRK6 1079 aa15.97■□□□□ 0.15
SMG9-201ENST00000270066 MAP3K1Q13233 1512 aa15.97■□□□□ 0.15
SMG9-201ENST00000270066 TSR2Q969E8 191 aaKnown RBP15.97■□□□□ 0.15
SMG9-201ENST00000270066 NSD3Q9BZ95 1437 aa15.97■□□□□ 0.15
SMG9-201ENST00000270066 IPO7O95373 1038 aaKnown RBP15.96■□□□□ 0.15
SMG9-201ENST00000270066 FAM43AQ8N2R8 423 aa15.96■□□□□ 0.15
SMG9-201ENST00000270066 ZNF771Q7L3S4 317 aaPredicted RBP15.96■□□□□ 0.15
SMG9-201ENST00000270066 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.96■□□□□ 0.152e-7■■■■□ 24.9
SMG9-201ENST00000270066 FAM135AQ9P2D6 1515 aa15.96■□□□□ 0.15
SMG9-201ENST00000270066 PRM3Q9NNZ6 103 aa15.96■□□□□ 0.15
SMG9-201ENST00000270066 PPP6R1Q9UPN7 881 aa15.95■□□□□ 0.14
SMG9-201ENST00000270066 ABCC5O15440 1437 aa15.95■□□□□ 0.14
SMG9-201ENST00000270066 RRS1Q15050 365 aaKnown RBP15.94■□□□□ 0.14
SMG9-201ENST00000270066 SASS6Q6UVJ0 657 aa15.94■□□□□ 0.14
SMG9-201ENST00000270066 BTBD11A6QL63 1104 aa15.94■□□□□ 0.14
SMG9-201ENST00000270066 AKNAQ7Z591 1439 aa15.94■□□□□ 0.14
SMG9-201ENST00000270066 CCDC70Q6NSX1 233 aa15.94■□□□□ 0.14
SMG9-201ENST00000270066 ZNF428Q96B54 188 aa15.94■□□□□ 0.14
SMG9-201ENST00000270066 DENND4BO75064 1496 aaPredicted RBP15.93■□□□□ 0.14
SMG9-201ENST00000270066 URB2Q14146 1524 aaKnown RBP15.93■□□□□ 0.14
SMG9-201ENST00000270066 MCM2P49736 904 aa15.93■□□□□ 0.14
SMG9-201ENST00000270066 SAMD1Q6SPF0 538 aaPredicted RBP15.93■□□□□ 0.14
SMG9-201ENST00000270066 PDZRN3Q9UPQ7 1066 aa15.93■□□□□ 0.14
SMG9-201ENST00000270066 FOSBP53539 338 aa15.92■□□□□ 0.14
SMG9-201ENST00000270066 NFE2L2Q16236 605 aa15.92■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 73.8 ms