RNA–Protein interactions for RNA: ENST00000269217.10

LAMA3-201, Transcript of laminin subunit alpha 3, humanhuman

TSL 1 (best) BASIC

Gene LAMA3, Length 5,671 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA3-201ENST00000269217 TCEAL9Q9UHQ7 104 aa12.27□□□□□ -0.45
LAMA3-201ENST00000269217 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.27□□□□□ -0.45
LAMA3-201ENST00000269217 RNF214Q8ND24 703 aa12.26□□□□□ -0.45
LAMA3-201ENST00000269217 TSR2Q969E8 191 aaKnown RBP12.26□□□□□ -0.45
LAMA3-201ENST00000269217 RAD21O60216 631 aa12.26□□□□□ -0.45
LAMA3-201ENST00000269217 PRAM1Q96QH2 718 aa12.26□□□□□ -0.45
LAMA3-201ENST00000269217 BRMS1Q9HCU9 246 aa12.26□□□□□ -0.45
LAMA3-201ENST00000269217 SUPT6HQ7KZ85 1726 aaKnown RBP12.26□□□□□ -0.45
LAMA3-201ENST00000269217 XBP1P17861 261 aa12.26□□□□□ -0.45
LAMA3-201ENST00000269217 MTERF4Q7Z6M4 381 aaKnown RBP12.26□□□□□ -0.45
LAMA3-201ENST00000269217 TSPY26PQ9H489 355 aa12.26□□□□□ -0.45
LAMA3-201ENST00000269217 CWC22Q9HCG8 908 aaKnown RBP12.26□□□□□ -0.45
LAMA3-201ENST00000269217 SLC12A5Q9H2X9 1139 aa12.26□□□□□ -0.45
LAMA3-201ENST00000269217 DAPK1P53355 1430 aa12.25□□□□□ -0.45
LAMA3-201ENST00000269217 ATF3P18847 181 aa12.25□□□□□ -0.45
LAMA3-201ENST00000269217 WWC1Q8IX03 1113 aa12.25□□□□□ -0.45
LAMA3-201ENST00000269217 C1orf115Q9H7X2 142 aa12.25□□□□□ -0.45
LAMA3-201ENST00000269217 R3HCC1Q9Y3T6 440 aaKnown RBP12.25□□□□□ -0.45
LAMA3-201ENST00000269217 WDR97A6NE52 1622 aa12.25□□□□□ -0.45
LAMA3-201ENST00000269217 PLEKHO1Q53GL0 409 aaPredicted RBP12.25□□□□□ -0.45
LAMA3-201ENST00000269217 NUTM2GQ5VZR2 741 aa12.25□□□□□ -0.45
LAMA3-201ENST00000269217 PRPF40AO75400 957 aaKnown RBP12.25□□□□□ -0.45
LAMA3-201ENST00000269217 CCT4P50991 539 aaKnown RBP12.25□□□□□ -0.45
LAMA3-201ENST00000269217 CCDC173Q0VFZ6 552 aa12.25□□□□□ -0.45
LAMA3-201ENST00000269217 MVPQ14764 893 aaKnown RBP12.25□□□□□ -0.45
LAMA3-201ENST00000269217 ATF7IPQ6VMQ6 1270 aa12.25□□□□□ -0.45
LAMA3-201ENST00000269217 ACBD3Q9H3P7 528 aa12.25□□□□□ -0.45
LAMA3-201ENST00000269217 PRG4Q92954 1404 aaPredicted RBP12.25□□□□□ -0.45
LAMA3-201ENST00000269217 GPRASP1Q5JY77 1395 aa12.25□□□□□ -0.45
LAMA3-201ENST00000269217 MAP7D2Q96T17 732 aa12.25□□□□□ -0.45
LAMA3-201ENST00000269217 CCDC27Q2M243 656 aa12.24□□□□□ -0.45
LAMA3-201ENST00000269217 CTDP1Q9Y5B0 961 aaPredicted RBP12.24□□□□□ -0.45
LAMA3-201ENST00000269217 KINO60870 393 aaKnown RBP12.24□□□□□ -0.45
LAMA3-201ENST00000269217 ABTB2Q8N961 1025 aa12.23□□□□□ -0.45
LAMA3-201ENST00000269217 TRIM5Q9C035 493 aa12.23□□□□□ -0.45
LAMA3-201ENST00000269217 SLC4A2P04920 1241 aa12.23□□□□□ -0.45
LAMA3-201ENST00000269217 SART3Q15020 963 aaKnown RBP12.23□□□□□ -0.45
LAMA3-201ENST00000269217 ZNF692Q9BU19 519 aaPredicted RBP12.23□□□□□ -0.45
LAMA3-201ENST00000269217 TBC1D2BQ9UPU7 963 aa12.23□□□□□ -0.45
LAMA3-201ENST00000269217 K7ELQ4 463 aaPredicted RBP12.23□□□□□ -0.45
LAMA3-201ENST00000269217 PRM3Q9NNZ6 103 aa12.22□□□□□ -0.45
LAMA3-201ENST00000269217 MSH5O43196 834 aa12.22□□□□□ -0.45
LAMA3-201ENST00000269217 LRRCC1Q9C099 1032 aa12.22□□□□□ -0.45
LAMA3-201ENST00000269217 RBM33Q96EV2 1170 aaKnown RBP12.22□□□□□ -0.45
LAMA3-201ENST00000269217 ZNF396Q96N95 335 aaPredicted RBP12.22□□□□□ -0.45
LAMA3-201ENST00000269217 DNAJC2Q99543 621 aaKnown RBP12.22□□□□□ -0.45
LAMA3-201ENST00000269217 CDK19Q9BWU1 502 aa12.22□□□□□ -0.45
LAMA3-201ENST00000269217 RUFY1Q96T51 708 aa12.22□□□□□ -0.45
LAMA3-201ENST00000269217 HDGFL1Q5TGJ6 251 aa12.21□□□□□ -0.45
LAMA3-201ENST00000269217 ZNF428Q96B54 188 aa12.21□□□□□ -0.45
LAMA3-201ENST00000269217 SULT6B1Q6IMI4 303 aa12.21□□□□□ -0.45
LAMA3-201ENST00000269217 CHD1LQ86WJ1 897 aa12.21□□□□□ -0.45
LAMA3-201ENST00000269217 AEBP1Q8IUX7 1158 aa12.21□□□□□ -0.45
LAMA3-201ENST00000269217 AK7Q96M32 723 aa12.21□□□□□ -0.45
LAMA3-201ENST00000269217 FIBPO43427 364 aa12.2□□□□□ -0.46
LAMA3-201ENST00000269217 SLC52A1Q9NWF4 448 aa12.2□□□□□ -0.46
LAMA3-201ENST00000269217 CYP46A1Q9Y6A2 500 aa12.2□□□□□ -0.46
LAMA3-201ENST00000269217 RPGRIP1LQ68CZ1 1315 aa12.2□□□□□ -0.46
LAMA3-201ENST00000269217 CDR1P51861 262 aa12.2□□□□□ -0.46
LAMA3-201ENST00000269217 ANKRD1Q15327 319 aa12.2□□□□□ -0.46
LAMA3-201ENST00000269217 CCDC184Q52MB2 194 aa12.2□□□□□ -0.46
LAMA3-201ENST00000269217 HSP90B2PQ58FF3 399 aa12.2□□□□□ -0.46
LAMA3-201ENST00000269217 PDILTQ8N807 584 aa12.2□□□□□ -0.46
LAMA3-201ENST00000269217 SRCIN1Q9C0H9 1055 aa12.2□□□□□ -0.46
LAMA3-201ENST00000269217 CABP1Q9NZU7 370 aa12.2□□□□□ -0.46
LAMA3-201ENST00000269217 IFT140Q96RY7 1462 aa12.2□□□□□ -0.46
LAMA3-201ENST00000269217 ANKRD30BQ9BXX2 1392 aa12.2□□□□□ -0.46
LAMA3-201ENST00000269217 WDR33Q9C0J8 1336 aaKnown RBP12.2□□□□□ -0.46
LAMA3-201ENST00000269217 CIZ1Q9ULV3 898 aaPredicted RBP12.2□□□□□ -0.46
LAMA3-201ENST00000269217 BRPF3Q9ULD4 1205 aa12.2□□□□□ -0.46
LAMA3-201ENST00000269217 CCP110O43303 1012 aa12.2□□□□□ -0.46
LAMA3-201ENST00000269217 NAP1L1P55209 391 aaKnown RBP12.2□□□□□ -0.46
LAMA3-201ENST00000269217 HMGN5P82970 282 aaKnown RBP12.2□□□□□ -0.46
LAMA3-201ENST00000269217 ATAD2Q6PL18 1390 aa12.19□□□□□ -0.46
LAMA3-201ENST00000269217 CCDC43Q96MW1 224 aaKnown RBP12.19□□□□□ -0.46
LAMA3-201ENST00000269217 TOPBP1Q92547 1522 aa12.19□□□□□ -0.46
LAMA3-201ENST00000269217 NAIPQ13075 1403 aa12.19□□□□□ -0.46
LAMA3-201ENST00000269217 TXNDC2Q86VQ3 553 aa12.19□□□□□ -0.46
LAMA3-201ENST00000269217 MRC2Q9UBG0 1479 aa12.19□□□□□ -0.46
LAMA3-201ENST00000269217 SLFN5Q08AF3 891 aa12.18□□□□□ -0.46
LAMA3-201ENST00000269217 FYB1O15117 783 aa12.18□□□□□ -0.46
LAMA3-201ENST00000269217 SMC2O95347 1197 aa12.18□□□□□ -0.46
LAMA3-201ENST00000269217 STK38Q15208 465 aa12.18□□□□□ -0.46
LAMA3-201ENST00000269217 KIF6Q6ZMV9 814 aa12.18□□□□□ -0.46
LAMA3-201ENST00000269217 DHX8Q14562 1220 aaKnown RBP12.17□□□□□ -0.46
LAMA3-201ENST00000269217 POLA1P09884 1462 aaPredicted RBP12.17□□□□□ -0.46
LAMA3-201ENST00000269217 RTEL1-TNFRSF6BF6WH68 1400 aa12.17□□□□□ -0.46
LAMA3-201ENST00000269217 FCHSD2O94868 740 aa12.17□□□□□ -0.46
LAMA3-201ENST00000269217 CCDC192P0DO97 292 aa12.17□□□□□ -0.46
LAMA3-201ENST00000269217 FILIP1LQ4L180 1135 aa12.17□□□□□ -0.46
LAMA3-201ENST00000269217 CCDC158Q5M9N0 1113 aa12.17□□□□□ -0.46
LAMA3-201ENST00000269217 JMYQ8N9B5 988 aa12.17□□□□□ -0.46
LAMA3-201ENST00000269217 ESCO1Q5FWF5 840 aa12.17□□□□□ -0.46
LAMA3-201ENST00000269217 GRPEL1Q9HAV7 217 aa12.17□□□□□ -0.46
LAMA3-201ENST00000269217 TATP17735 454 aaPredicted RBP12.16□□□□□ -0.46
LAMA3-201ENST00000269217 ERCC4Q92889 916 aaPredicted RBP12.16□□□□□ -0.46
LAMA3-201ENST00000269217 OFD1O75665 1012 aa12.16□□□□□ -0.46
LAMA3-201ENST00000269217 RPAP2Q8IXW5 612 aaPredicted RBP12.16□□□□□ -0.46
LAMA3-201ENST00000269217 EPS15P42566 896 aa12.16□□□□□ -0.46
LAMA3-201ENST00000269217 KRT85P78386 507 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms