RNA–Protein interactions for RNA: ENST00000264454.7

SEC22C-201, Transcript of SEC22 homolog C, vesicle trafficking protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC22C, Length 1,380 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22C-201ENST00000264454 ACEP12821 1306 aa13.21□□□□□ -0.29
SEC22C-201ENST00000264454 MON2Q7Z3U7 1717 aa13.21□□□□□ -0.29
SEC22C-201ENST00000264454 UBAP1LF5GYI3 381 aa13.21□□□□□ -0.29
SEC22C-201ENST00000264454 COG3Q96JB2 828 aa13.21□□□□□ -0.29
SEC22C-201ENST00000264454 TOPAZ1Q8N9V7 1692 aa13.21□□□□□ -0.29
SEC22C-201ENST00000264454 ITSN1Q15811 1721 aa13.21□□□□□ -0.3
SEC22C-201ENST00000264454 AATKQ6ZMQ8 1374 aa13.21□□□□□ -0.3
SEC22C-201ENST00000264454 PNPLA6Q8IY17 1366 aa13.21□□□□□ -0.3
SEC22C-201ENST00000264454 RUNDC1Q96C34 613 aa13.2□□□□□ -0.3
SEC22C-201ENST00000264454 PNNQ9H307 717 aaKnown RBP13.2□□□□□ -0.3
SEC22C-201ENST00000264454 TTC21BQ7Z4L5 1316 aa13.2□□□□□ -0.3
SEC22C-201ENST00000264454 TTC21AQ8NDW8 1320 aa13.2□□□□□ -0.3
SEC22C-201ENST00000264454 NCKAP5LQ9HCH0 1330 aa13.2□□□□□ -0.3
SEC22C-201ENST00000264454 USP6P35125 1406 aa13.19□□□□□ -0.3
SEC22C-201ENST00000264454 SALL2Q9Y467 1007 aaPredicted RBP13.19□□□□□ -0.3
SEC22C-201ENST00000264454 ZNF521Q96K83 1311 aa13.18□□□□□ -0.3
SEC22C-201ENST00000264454 SHPRHQ149N8 1683 aa13.18□□□□□ -0.3
SEC22C-201ENST00000264454 APAF1O14727 1248 aa13.18□□□□□ -0.3
SEC22C-201ENST00000264454 DIAPH1O60610 1272 aaKnown RBP13.18□□□□□ -0.3
SEC22C-201ENST00000264454 GOLGA2Q08379 1002 aa13.18□□□□□ -0.3
SEC22C-201ENST00000264454 NME9Q86XW9 330 aa13.18□□□□□ -0.3
SEC22C-201ENST00000264454 NGDNQ8NEJ9 315 aaKnown RBP13.18□□□□□ -0.3
SEC22C-201ENST00000264454 RNF123Q5XPI4 1314 aa13.17□□□□□ -0.3
SEC22C-201ENST00000264454 POLKQ9UBT6 870 aa13.17□□□□□ -0.3
SEC22C-201ENST00000264454 SSH2Q76I76 1423 aa13.17□□□□□ -0.3
SEC22C-201ENST00000264454 NWD1Q149M9 1564 aa13.16□□□□□ -0.3
SEC22C-201ENST00000264454 ADGRL3Q9HAR2 1447 aa13.16□□□□□ -0.3
SEC22C-201ENST00000264454 NUTM2FA1L443 756 aa13.16□□□□□ -0.3
SEC22C-201ENST00000264454 U2AF1L5P0DN76 240 aaPredicted RBP13.16□□□□□ -0.3
SEC22C-201ENST00000264454 U2AF1Q01081 240 aaKnown RBP eCLIP13.16□□□□□ -0.3
SEC22C-201ENST00000264454 CCDC146Q8IYE0 955 aa13.16□□□□□ -0.3
SEC22C-201ENST00000264454 COL3A1P02461 1466 aaPredicted RBP13.15□□□□□ -0.3
SEC22C-201ENST00000264454 FMN2Q9NZ56 1722 aa13.15□□□□□ -0.3
SEC22C-201ENST00000264454 CCDC27Q2M243 656 aa13.15□□□□□ -0.3
SEC22C-201ENST00000264454 PELP1Q8IZL8 1130 aaKnown RBP13.15□□□□□ -0.3
SEC22C-201ENST00000264454 NKTRP30414 1462 aaKnown RBP13.15□□□□□ -0.31
SEC22C-201ENST00000264454 NRKQ7Z2Y5 1582 aa13.14□□□□□ -0.31
SEC22C-201ENST00000264454 MED1Q15648 1581 aaPredicted RBP13.14□□□□□ -0.31
SEC22C-201ENST00000264454 NCOA3Q9Y6Q9 1424 aa13.13□□□□□ -0.31
SEC22C-201ENST00000264454 SENP3-EIF4A1A0A087X0R7 540 aa13.13□□□□□ -0.31
SEC22C-201ENST00000264454 E9PSI1 815 aa13.13□□□□□ -0.31
SEC22C-201ENST00000264454 FCHSD2O94868 740 aa13.13□□□□□ -0.31
SEC22C-201ENST00000264454 SLFN5Q08AF3 891 aa13.13□□□□□ -0.31
SEC22C-201ENST00000264454 TCP11L2Q8N4U5 519 aa13.13□□□□□ -0.31
SEC22C-201ENST00000264454 PMFBP1Q8TBY8 1022 aa13.13□□□□□ -0.31
SEC22C-201ENST00000264454 CDCA7LQ96GN5 454 aa13.13□□□□□ -0.31
SEC22C-201ENST00000264454 RCAN3Q9UKA8 241 aa13.13□□□□□ -0.31
SEC22C-201ENST00000264454 USP31Q70CQ4 1352 aa13.13□□□□□ -0.31
SEC22C-201ENST00000264454 CDK12Q9NYV4 1490 aaPredicted RBP13.13□□□□□ -0.31
SEC22C-201ENST00000264454 OVOS2A0A0J9YW53 1432 aa13.13□□□□□ -0.31
SEC22C-201ENST00000264454 OVOS2Q6IE36 1432 aa13.13□□□□□ -0.31
SEC22C-201ENST00000264454 U2SURPO15042 1029 aaKnown RBP13.12□□□□□ -0.31
SEC22C-201ENST00000264454 PROSER2Q86WR7 435 aaPredicted RBP13.12□□□□□ -0.31
SEC22C-201ENST00000264454 WDR63Q8IWG1 891 aa13.12□□□□□ -0.31
SEC22C-201ENST00000264454 TRMT2AQ8IZ69 625 aaKnown RBP13.12□□□□□ -0.31
SEC22C-201ENST00000264454 PHF8Q9UPP1 1060 aa13.12□□□□□ -0.31
SEC22C-201ENST00000264454 NEFMP07197 916 aa13.11□□□□□ -0.31
SEC22C-201ENST00000264454 DUSP27Q5VZP5 1158 aa13.11□□□□□ -0.31
SEC22C-201ENST00000264454 C14orf37Q86TY3 774 aa13.11□□□□□ -0.31
SEC22C-201ENST00000264454 PHF23Q9BUL5 403 aaPredicted RBP13.11□□□□□ -0.31
SEC22C-201ENST00000264454 NALCNQ8IZF0 1738 aa13.11□□□□□ -0.31
SEC22C-201ENST00000264454 PPM1GO15355 546 aaPredicted RBP13.1□□□□□ -0.31
SEC22C-201ENST00000264454 WWC1Q8IX03 1113 aa13.1□□□□□ -0.31
SEC22C-201ENST00000264454 PLEKHF1Q96S99 279 aa13.1□□□□□ -0.31
SEC22C-201ENST00000264454 C19orf44Q9H6X5 657 aa13.1□□□□□ -0.31
SEC22C-201ENST00000264454 ZRANB1Q9UGI0 708 aa13.1□□□□□ -0.31
SEC22C-201ENST00000264454 ZNF335Q9H4Z2 1342 aaPredicted RBP13.1□□□□□ -0.31
SEC22C-201ENST00000264454 MAPK8IP3Q9UPT6 1336 aa13.1□□□□□ -0.31
SEC22C-201ENST00000264454 HSPA1LP34931 641 aa13.09□□□□□ -0.31
SEC22C-201ENST00000264454 EMILIN1Q9Y6C2 1016 aa13.09□□□□□ -0.31
SEC22C-201ENST00000264454 MAP2P11137 1827 aaKnown RBP13.09□□□□□ -0.31
SEC22C-201ENST00000264454 IL13P35225 146 aa13.08□□□□□ -0.31
SEC22C-201ENST00000264454 PPP4R2Q9NY27 417 aa13.08□□□□□ -0.31
SEC22C-201ENST00000264454 RGPD8O14715 1765 aaPredicted RBP13.07□□□□□ -0.32
SEC22C-201ENST00000264454 LRRC7Q96NW7 1537 aa13.07□□□□□ -0.32
SEC22C-201ENST00000264454 KIF24Q5T7B8 1368 aa13.07□□□□□ -0.32
SEC22C-201ENST00000264454 RRP1P56182 461 aaKnown RBP13.07□□□□□ -0.32
SEC22C-201ENST00000264454 ESCO1Q5FWF5 840 aa13.07□□□□□ -0.32
SEC22C-201ENST00000264454 DCCP43146 1447 aa13.06□□□□□ -0.32
SEC22C-201ENST00000264454 FBLN1P23142 703 aa13.06□□□□□ -0.32
SEC22C-201ENST00000264454 TMPOP42166 694 aaKnown RBP13.06□□□□□ -0.32
SEC22C-201ENST00000264454 NLRP6P59044 892 aa13.06□□□□□ -0.32
SEC22C-201ENST00000264454 PSME1Q06323 249 aa13.06□□□□□ -0.32
SEC22C-201ENST00000264454 RRS1Q15050 365 aaKnown RBP13.06□□□□□ -0.32
SEC22C-201ENST00000264454 RSPH6AQ9H0K4 717 aa13.06□□□□□ -0.32
SEC22C-201ENST00000264454 IRX6P78412 446 aaPredicted RBP13.05□□□□□ -0.32
SEC22C-201ENST00000264454 NEUROD2Q15784 382 aa13.05□□□□□ -0.32
SEC22C-201ENST00000264454 ABTB2Q8N961 1025 aa13.05□□□□□ -0.32
SEC22C-201ENST00000264454 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.05□□□□□ -0.32
SEC22C-201ENST00000264454 MYH16Q9H6N6 1097 aa13.05□□□□□ -0.32
SEC22C-201ENST00000264454 IL16Q14005 1332 aa13.05□□□□□ -0.32
SEC22C-201ENST00000264454 USP54Q70EL1 1684 aa13.04□□□□□ -0.32
SEC22C-201ENST00000264454 ATF3P18847 181 aa13.04□□□□□ -0.32
SEC22C-201ENST00000264454 RBM33Q96EV2 1170 aaKnown RBP13.04□□□□□ -0.32
SEC22C-201ENST00000264454 SBNO1A3KN83 1393 aa13.04□□□□□ -0.32
SEC22C-201ENST00000264454 TOM1O60784 492 aa13.03□□□□□ -0.32
SEC22C-201ENST00000264454 PAK3O75914 559 aaPredicted RBP13.03□□□□□ -0.32
SEC22C-201ENST00000264454 PRKAR2BP31323 418 aa13.03□□□□□ -0.32
SEC22C-201ENST00000264454 PIP4K2BP78356 416 aa13.03□□□□□ -0.32
SEC22C-201ENST00000264454 RRP7AQ9Y3A4 280 aaKnown RBP13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms