RNA–Protein interactions for RNA: ENST00000261917.3

HCN4-201, Transcript of hyperpolarization activated cyclic nucleotide gated potassium channel 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HCN4, Length 7,228 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCN4-201ENST00000261917 MATR3P43243 847 aaKnown RBP eCLIP21.68■■□□□ 1.06
HCN4-201ENST00000261917 NUP133Q8WUM0 1156 aa21.68■■□□□ 1.06
HCN4-201ENST00000261917 SDF4Q9BRK5 362 aa21.68■■□□□ 1.06
HCN4-201ENST00000261917 MYCNP04198 464 aaPredicted RBP21.68■■□□□ 1.06
HCN4-201ENST00000261917 CCDC158Q5M9N0 1113 aa21.68■■□□□ 1.06
HCN4-201ENST00000261917 WASHC2AQ641Q2 1341 aa21.67■■□□□ 1.06
HCN4-201ENST00000261917 FKBP4Q02790 459 aaKnown RBP eCLIP21.67■■□□□ 1.06
HCN4-201ENST00000261917 C22orf23Q9BZE7 217 aa21.67■■□□□ 1.06
HCN4-201ENST00000261917 CFAP70Q5T0N1 1121 aa21.67■■□□□ 1.06
HCN4-201ENST00000261917 RNF214Q8ND24 703 aa21.67■■□□□ 1.06
HCN4-201ENST00000261917 SMC2O95347 1197 aa21.67■■□□□ 1.06
HCN4-201ENST00000261917 CLASRPQ8N2M8 674 aaKnown RBP21.67■■□□□ 1.06
HCN4-201ENST00000261917 HSP90AA2PQ14568 343 aaPredicted RBP21.66■■□□□ 1.06
HCN4-201ENST00000261917 GAPVD1Q14C86 1478 aa21.66■■□□□ 1.06
HCN4-201ENST00000261917 CDK19Q9BWU1 502 aa21.65■■□□□ 1.06
HCN4-201ENST00000261917 AQRO60306 1485 aaKnown RBP eCLIP21.65■■□□□ 1.06
HCN4-201ENST00000261917 MPHOSPH10O00566 681 aaKnown RBP21.65■■□□□ 1.06
HCN4-201ENST00000261917 GSE1Q14687 1217 aa21.65■■□□□ 1.06
HCN4-201ENST00000261917 PAXIP1Q6ZW49 1069 aaPredicted RBP21.65■■□□□ 1.06
HCN4-201ENST00000261917 PSMA5P28066 241 aa21.65■■□□□ 1.06
HCN4-201ENST00000261917 TSR2Q969E8 191 aaKnown RBP21.65■■□□□ 1.06
HCN4-201ENST00000261917 SULT6B1Q6IMI4 303 aa21.64■■□□□ 1.05
HCN4-201ENST00000261917 SLC26A8Q96RN1 970 aa21.64■■□□□ 1.05
HCN4-201ENST00000261917 ZNF219Q9P2Y4 722 aaPredicted RBP21.64■■□□□ 1.05
HCN4-201ENST00000261917 MPHOSPH8Q99549 860 aa21.64■■□□□ 1.05
HCN4-201ENST00000261917 FAM13BQ9NYF5 915 aa21.64■■□□□ 1.05
HCN4-201ENST00000261917 NOB1Q9ULX3 412 aaKnown RBP21.64■■□□□ 1.05
HCN4-201ENST00000261917 ZBED9Q6R2W3 1325 aa21.64■■□□□ 1.05
HCN4-201ENST00000261917 SYCP1Q15431 976 aa21.64■■□□□ 1.05
HCN4-201ENST00000261917 GNL3LQ9NVN8 582 aaKnown RBP21.64■■□□□ 1.05
HCN4-201ENST00000261917 ADAMTS8Q9UP79 889 aa21.63■■□□□ 1.05
HCN4-201ENST00000261917 SLC4A2P04920 1241 aa21.63■■□□□ 1.05
HCN4-201ENST00000261917 GAS2L2Q8NHY3 880 aa21.63■■□□□ 1.05
HCN4-201ENST00000261917 MAGEC2Q9UBF1 373 aaPredicted RBP21.63■■□□□ 1.05
HCN4-201ENST00000261917 AK7Q96M32 723 aa21.62■■□□□ 1.05
HCN4-201ENST00000261917 VSIG10Q8N0Z9 540 aa21.62■■□□□ 1.05
HCN4-201ENST00000261917 MNS1Q8NEH6 495 aa21.62■■□□□ 1.05
HCN4-201ENST00000261917 RRS1Q15050 365 aaKnown RBP21.62■■□□□ 1.05
HCN4-201ENST00000261917 ZC3H6P61129 1189 aaKnown RBP21.61■■□□□ 1.05
HCN4-201ENST00000261917 ZSCAN21Q9Y5A6 473 aaPredicted RBP21.61■■□□□ 1.05
HCN4-201ENST00000261917 CDC45O75419 566 aa21.61■■□□□ 1.05
HCN4-201ENST00000261917 DHX37Q8IY37 1157 aaKnown RBP21.6■■□□□ 1.05
HCN4-201ENST00000261917 EXOSC9Q06265 439 aaKnown RBP21.6■■□□□ 1.05
HCN4-201ENST00000261917 CCDC69A6NI79 296 aa21.6■■□□□ 1.05
HCN4-201ENST00000261917 HDGFL1Q5TGJ6 251 aa21.59■■□□□ 1.05
HCN4-201ENST00000261917 CNTLNQ9NXG0 1405 aa21.59■■□□□ 1.05
HCN4-201ENST00000261917 USP5P45974 858 aa21.59■■□□□ 1.05
HCN4-201ENST00000261917 TWISTNBQ3B726 338 aaPredicted RBP21.59■■□□□ 1.05
HCN4-201ENST00000261917 CABP1Q9NZU7 370 aa21.59■■□□□ 1.05
HCN4-201ENST00000261917 ZNF530Q6P9A1 599 aaPredicted RBP21.59■■□□□ 1.05
HCN4-201ENST00000261917 TANGO6Q9C0B7 1094 aa21.59■■□□□ 1.05
HCN4-201ENST00000261917 CHMP5Q9NZZ3 219 aa21.59■■□□□ 1.05
HCN4-201ENST00000261917 ADAMTS2O95450 1211 aa21.58■■□□□ 1.05
HCN4-201ENST00000261917 PDCL3Q9H2J4 239 aa21.58■■□□□ 1.05
HCN4-201ENST00000261917 CCDC57Q2TAC2 916 aa21.58■■□□□ 1.05
HCN4-201ENST00000261917 CDCA7LQ96GN5 454 aa21.58■■□□□ 1.05
HCN4-201ENST00000261917 NAT10Q9H0A0 1025 aaKnown RBP21.58■■□□□ 1.04
HCN4-201ENST00000261917 BTBD11A6QL63 1104 aa21.57■■□□□ 1.04
HCN4-201ENST00000261917 SEPT11Q9NVA2 429 aaKnown RBP21.57■■□□□ 1.04
HCN4-201ENST00000261917 TXLNAP40222 546 aa21.57■■□□□ 1.04
HCN4-201ENST00000261917 SPC24Q8NBT2 197 aa21.57■■□□□ 1.04
HCN4-201ENST00000261917 CCDC173Q0VFZ6 552 aa21.57■■□□□ 1.04
HCN4-201ENST00000261917 DDX24Q9GZR7 859 aaKnown RBP eCLIP21.57■■□□□ 1.04
HCN4-201ENST00000261917 FGD5Q6ZNL6 1462 aa21.57■■□□□ 1.04
HCN4-201ENST00000261917 SPG7Q9UQ90 795 aa21.56■■□□□ 1.04
HCN4-201ENST00000261917 GNAI2P04899 355 aa21.56■■□□□ 1.04
HCN4-201ENST00000261917 SSBP05455 408 aaKnown RBP eCLIP21.56■■□□□ 1.04
HCN4-201ENST00000261917 TCP11L2Q8N4U5 519 aa21.56■■□□□ 1.04
HCN4-201ENST00000261917 NEK4P51957 841 aa21.56■■□□□ 1.04
HCN4-201ENST00000261917 PRDM11Q9NQV5 511 aa21.56■■□□□ 1.04
HCN4-201ENST00000261917 MIS18AQ9NYP9 233 aa21.56■■□□□ 1.04
HCN4-201ENST00000261917 KIF7Q2M1P5 1343 aa21.56■■□□□ 1.04
HCN4-201ENST00000261917 TEX35Q5T0J7 233 aa21.55■■□□□ 1.04
HCN4-201ENST00000261917 NUCB2P80303 420 aa21.55■■□□□ 1.04
HCN4-201ENST00000261917 RAI14Q9P0K7 980 aa21.55■■□□□ 1.04
HCN4-201ENST00000261917 SMARCA4P51532 1647 aa21.54■■□□□ 1.04
HCN4-201ENST00000261917 ANKRD62A6NC57 917 aa21.54■■□□□ 1.04
HCN4-201ENST00000261917 PPM1FP49593 454 aaPredicted RBP21.54■■□□□ 1.04
HCN4-201ENST00000261917 ZNF76P36508 570 aa21.53■■□□□ 1.04
HCN4-201ENST00000261917 MYOM3Q5VTT5 1437 aa21.53■■□□□ 1.04
HCN4-201ENST00000261917 NEFHP12036 1026 aa21.53■■□□□ 1.04
HCN4-201ENST00000261917 MPNDQ8N594 471 aa21.53■■□□□ 1.04
HCN4-201ENST00000261917 FIBPO43427 364 aa21.53■■□□□ 1.04
HCN4-201ENST00000261917 BCAR3O75815 825 aa21.53■■□□□ 1.04
HCN4-201ENST00000261917 CAVIN1Q6NZI2 390 aaKnown RBP21.53■■□□□ 1.04
HCN4-201ENST00000261917 TRIM5Q9C035 493 aa21.53■■□□□ 1.04
HCN4-201ENST00000261917 SLC12A5Q9H2X9 1139 aa21.53■■□□□ 1.04
HCN4-201ENST00000261917 GNAI3P08754 354 aa21.52■■□□□ 1.04
HCN4-201ENST00000261917 TTLL12Q14166 644 aaPredicted RBP21.52■■□□□ 1.04
HCN4-201ENST00000261917 ATAD2BQ9ULI0 1458 aa21.52■■□□□ 1.04
HCN4-201ENST00000261917 TDO2P48775 406 aa21.52■■□□□ 1.04
HCN4-201ENST00000261917 KINO60870 393 aaKnown RBP21.51■■□□□ 1.03
HCN4-201ENST00000261917 STK38Q15208 465 aa21.51■■□□□ 1.03
HCN4-201ENST00000261917 SOGA3Q5TF21 947 aa21.51■■□□□ 1.03
HCN4-201ENST00000261917 AACSQ86V21 672 aa21.5■■□□□ 1.03
HCN4-201ENST00000261917 PTCD1O75127 700 aaKnown RBP21.5■■□□□ 1.03
HCN4-201ENST00000261917 PRPF40AO75400 957 aaKnown RBP21.5■■□□□ 1.03
HCN4-201ENST00000261917 THEMISQ8N1K5 641 aaPredicted RBP21.5■■□□□ 1.03
HCN4-201ENST00000261917 LRP2BPQ9P2M1 347 aa21.5■■□□□ 1.03
HCN4-201ENST00000261917 RAPGEF3O95398 923 aa21.49■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 129.6 ms