RNA–Protein interactions for RNA: ENST00000261897.5

PRPF40B-201, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRPF40B, Length 3,602 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-201ENST00000261897 TMEM63CQ9P1W3 806 aa19.43■□□□□ 0.7
PRPF40B-201ENST00000261897 SNX21Q969T3 373 aa19.43■□□□□ 0.7
PRPF40B-201ENST00000261897 PPP1R9BQ96SB3 815 aa19.43■□□□□ 0.7
PRPF40B-201ENST00000261897 NSFL1CQ9UNZ2 370 aaKnown RBP19.43■□□□□ 0.7
PRPF40B-201ENST00000261897 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP19.43■□□□□ 0.7
PRPF40B-201ENST00000261897 CUL7Q14999 1698 aa19.42■□□□□ 0.7
PRPF40B-201ENST00000261897 TMPOP42166 694 aaKnown RBP19.42■□□□□ 0.7
PRPF40B-201ENST00000261897 ATAD2Q6PL18 1390 aa19.42■□□□□ 0.7
PRPF40B-201ENST00000261897 FIBPO43427 364 aa19.42■□□□□ 0.7
PRPF40B-201ENST00000261897 LRRIQ1Q96JM4 1722 aa19.41■□□□□ 0.7
PRPF40B-201ENST00000261897 MTERF4Q7Z6M4 381 aaKnown RBP19.41■□□□□ 0.7
PRPF40B-201ENST00000261897 RBM25P49756 843 aaKnown RBP19.41■□□□□ 0.7
PRPF40B-201ENST00000261897 OTUD7AQ8TE49 926 aaPredicted RBP19.41■□□□□ 0.7
PRPF40B-201ENST00000261897 AFAP1Q8N556 730 aa19.4■□□□□ 0.7
PRPF40B-201ENST00000261897 KIF3AQ9Y496 699 aa19.4■□□□□ 0.7
PRPF40B-201ENST00000261897 DNMT1P26358 1616 aaKnown RBP19.4■□□□□ 0.7
PRPF40B-201ENST00000261897 BMP2KLQ5H9B9 411 aa19.4■□□□□ 0.7
PRPF40B-201ENST00000261897 GGT6Q6P531 493 aa19.4■□□□□ 0.7
PRPF40B-201ENST00000261897 PDCL2Q8N4E4 241 aa19.4■□□□□ 0.7
PRPF40B-201ENST00000261897 NUP153P49790 1475 aaKnown RBP19.4■□□□□ 0.7
PRPF40B-201ENST00000261897 HDAC1Q13547 482 aaPredicted RBP19.4■□□□□ 0.7
PRPF40B-201ENST00000261897 LMBRD1Q9NUN5 540 aa19.4■□□□□ 0.7
PRPF40B-201ENST00000261897 INTS3Q68E01 1043 aaKnown RBP19.39■□□□□ 0.69
PRPF40B-201ENST00000261897 A2MP01023 1474 aa19.39■□□□□ 0.69
PRPF40B-201ENST00000261897 IQGAP2Q13576 1575 aa19.38■□□□□ 0.69
PRPF40B-201ENST00000261897 HCLS1P14317 486 aaPredicted RBP19.38■□□□□ 0.69
PRPF40B-201ENST00000261897 ERICH4A6NGS2 130 aa19.38■□□□□ 0.69
PRPF40B-201ENST00000261897 PLCD3Q8N3E9 789 aa19.38■□□□□ 0.69
PRPF40B-201ENST00000261897 GPT2Q8TD30 523 aa19.38■□□□□ 0.69
PRPF40B-201ENST00000261897 ZBTB40Q9NUA8 1239 aa19.38■□□□□ 0.69
PRPF40B-201ENST00000261897 KIF21AQ7Z4S6 1674 aa19.38■□□□□ 0.69
PRPF40B-201ENST00000261897 ADGRF5Q8IZF2 1346 aa19.38■□□□□ 0.69
PRPF40B-201ENST00000261897 NECTIN2Q92692 538 aa19.37■□□□□ 0.69
PRPF40B-201ENST00000261897 URB2Q14146 1524 aaKnown RBP19.37■□□□□ 0.69
PRPF40B-201ENST00000261897 PRKAR2BP31323 418 aa19.37■□□□□ 0.69
PRPF40B-201ENST00000261897 LRSAM1Q6UWE0 723 aa19.37■□□□□ 0.69
PRPF40B-201ENST00000261897 CCDC94Q9BW85 323 aaPredicted RBP19.37■□□□□ 0.69
PRPF40B-201ENST00000261897 IFT57Q9NWB7 429 aa19.36■□□□□ 0.69
PRPF40B-201ENST00000261897 PRDM4Q9UKN5 801 aa19.36■□□□□ 0.69
PRPF40B-201ENST00000261897 INSRP06213 1382 aa19.36■□□□□ 0.69
PRPF40B-201ENST00000261897 ASXL1Q8IXJ9 1541 aa19.36■□□□□ 0.69
PRPF40B-201ENST00000261897 U2AF2P26368 475 aaKnown RBP eCLIP19.36■□□□□ 0.69
PRPF40B-201ENST00000261897 MINK1Q8N4C8 1332 aaPredicted RBP19.35■□□□□ 0.69
PRPF40B-201ENST00000261897 DCTN1Q14203 1278 aa19.35■□□□□ 0.69
PRPF40B-201ENST00000261897 SMAP1Q8IYB5 467 aaPredicted RBP19.35■□□□□ 0.69
PRPF40B-201ENST00000261897 ADCY5O95622 1261 aa19.34■□□□□ 0.69
PRPF40B-201ENST00000261897 NOLC1Q14978 699 aaKnown RBP eCLIP19.34■□□□□ 0.69
PRPF40B-201ENST00000261897 FBXW7Q969H0 707 aa19.34■□□□□ 0.69
PRPF40B-201ENST00000261897 NLRP1Q9C000 1473 aa19.34■□□□□ 0.69
PRPF40B-201ENST00000261897 DDX54Q8TDD1 881 aaKnown RBP19.34■□□□□ 0.69
PRPF40B-201ENST00000261897 REC8O95072 547 aa19.33■□□□□ 0.69
PRPF40B-201ENST00000261897 DIAPH1O60610 1272 aaKnown RBP19.33■□□□□ 0.69
PRPF40B-201ENST00000261897 MCCP23508 829 aa19.33■□□□□ 0.69
PRPF40B-201ENST00000261897 GOLGA6L4A6NEF3 574 aa19.33■□□□□ 0.68
PRPF40B-201ENST00000261897 TSPYL6Q8N831 410 aa19.33■□□□□ 0.68
PRPF40B-201ENST00000261897 GCC1Q96CN9 775 aa19.33■□□□□ 0.68
PRPF40B-201ENST00000261897 SAMD9Q5K651 1589 aa19.32■□□□□ 0.68
PRPF40B-201ENST00000261897 MAP4K4O95819 1239 aaPredicted RBP19.32■□□□□ 0.68
PRPF40B-201ENST00000261897 CHMP4BQ9H444 224 aaKnown RBP19.32■□□□□ 0.68
PRPF40B-201ENST00000261897 MBD3O95983 291 aa19.32■□□□□ 0.68
PRPF40B-201ENST00000261897 PHF14O94880 888 aa19.32■□□□□ 0.68
PRPF40B-201ENST00000261897 CARMIL2Q6F5E8 1435 aa19.32■□□□□ 0.68
PRPF40B-201ENST00000261897 ARHGEF12Q9NZN5 1544 aa19.31■□□□□ 0.68
PRPF40B-201ENST00000261897 VPS37CA5D8V6 355 aaPredicted RBP19.31■□□□□ 0.68
PRPF40B-201ENST00000261897 SPAG9O60271 1321 aaKnown RBP19.31■□□□□ 0.68
PRPF40B-201ENST00000261897 ZNF445P59923 1031 aa19.31■□□□□ 0.68
PRPF40B-201ENST00000261897 ZNF608Q9ULD9 1512 aaPredicted RBP19.31■□□□□ 0.68
PRPF40B-201ENST00000261897 HMGN5P82970 282 aaKnown RBP19.31■□□□□ 0.68
PRPF40B-201ENST00000261897 C16orf45Q96MC5 204 aaPredicted RBP19.31■□□□□ 0.68
PRPF40B-201ENST00000261897 KIF2CQ99661 725 aa19.31■□□□□ 0.68
PRPF40B-201ENST00000261897 PIK3C2GO75747 1445 aa19.3■□□□□ 0.68
PRPF40B-201ENST00000261897 AK9Q5TCS8 1911 aa19.3■□□□□ 0.68
PRPF40B-201ENST00000261897 GADD45BO75293 160 aaPredicted RBP19.3■□□□□ 0.68
PRPF40B-201ENST00000261897 NOL12Q9UGY1 213 aaKnown RBP eCLIP19.3■□□□□ 0.68
PRPF40B-201ENST00000261897 V9GYY5 206 aaPredicted RBP19.3■□□□□ 0.68
PRPF40B-201ENST00000261897 WDR62O43379 1518 aa19.3■□□□□ 0.68
PRPF40B-201ENST00000261897 ZBTB9Q96C00 473 aa19.3■□□□□ 0.68
PRPF40B-201ENST00000261897 ZBTB22O15209 634 aa19.29■□□□□ 0.68
PRPF40B-201ENST00000261897 ZNF500O60304 480 aaPredicted RBP19.29■□□□□ 0.68
PRPF40B-201ENST00000261897 PDE4CQ08493 712 aa19.29■□□□□ 0.68
PRPF40B-201ENST00000261897 GIMAP6Q6P9H5 292 aa19.29■□□□□ 0.68
PRPF40B-201ENST00000261897 WDR7Q9Y4E6 1490 aa19.29■□□□□ 0.68
PRPF40B-201ENST00000261897 POLR1AO95602 1720 aaPredicted RBP19.28■□□□□ 0.68
PRPF40B-201ENST00000261897 FAM135AQ9P2D6 1515 aa19.28■□□□□ 0.68
PRPF40B-201ENST00000261897 SDSP20132 328 aa19.28■□□□□ 0.68
PRPF40B-201ENST00000261897 TWISTNBQ3B726 338 aaPredicted RBP19.28■□□□□ 0.68
PRPF40B-201ENST00000261897 LAMC3Q9Y6N6 1575 aa19.28■□□□□ 0.68
PRPF40B-201ENST00000261897 CAMK4Q16566 473 aa19.28■□□□□ 0.68
PRPF40B-201ENST00000261897 EXOC6BQ9Y2D4 811 aa19.28■□□□□ 0.68
PRPF40B-201ENST00000261897 KCNJ4P48050 445 aa19.27■□□□□ 0.68
PRPF40B-201ENST00000261897 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.27■□□□□ 0.68
PRPF40B-201ENST00000261897 ZNF428Q96B54 188 aa19.27■□□□□ 0.68
PRPF40B-201ENST00000261897 TMX3Q96JJ7 454 aa19.27■□□□□ 0.68
PRPF40B-201ENST00000261897 STAG3Q9UJ98 1225 aa19.27■□□□□ 0.68
PRPF40B-201ENST00000261897 CWC22Q9HCG8 908 aaKnown RBP19.27■□□□□ 0.68
PRPF40B-201ENST00000261897 RSPH4AQ5TD94 716 aa19.27■□□□□ 0.67
PRPF40B-201ENST00000261897 GSPT1P15170 499 aaKnown RBP19.26■□□□□ 0.67
PRPF40B-201ENST00000261897 CHMP4AQ9BY43 222 aa19.26■□□□□ 0.67
PRPF40B-201ENST00000261897 ATP2B3Q16720 1220 aa19.26■□□□□ 0.67
PRPF40B-201ENST00000261897 FAM83GA6ND36 823 aa19.25■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms