RNA–Protein interactions for RNA: ENST00000261799.8

PDGFRB-201, Transcript of platelet derived growth factor receptor beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFRB, Length 5,717 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRB-201ENST00000261799 ATAD2Q6PL18 1390 aa16.47■□□□□ 0.23
PDGFRB-201ENST00000261799 ANKRD30BQ9BXX2 1392 aa16.47■□□□□ 0.23
PDGFRB-201ENST00000261799 CNTLNQ9NXG0 1405 aa16.46■□□□□ 0.23
PDGFRB-201ENST00000261799 GNAI3P08754 354 aa16.46■□□□□ 0.23
PDGFRB-201ENST00000261799 TOP2BQ02880 1626 aa16.46■□□□□ 0.23
PDGFRB-201ENST00000261799 CENPQQ7L2Z9 268 aaPredicted RBP16.45■□□□□ 0.22
PDGFRB-201ENST00000261799 NAP1L5Q96NT1 182 aaPredicted RBP16.45■□□□□ 0.22
PDGFRB-201ENST00000261799 PRKAR2BP31323 418 aa16.44■□□□□ 0.22
PDGFRB-201ENST00000261799 ATP2B2Q01814 1243 aa16.44■□□□□ 0.22
PDGFRB-201ENST00000261799 MSH6P52701 1360 aa16.44■□□□□ 0.22
PDGFRB-201ENST00000261799 DNAJC2Q99543 621 aaKnown RBP16.44■□□□□ 0.22
PDGFRB-201ENST00000261799 SUPT6HQ7KZ85 1726 aaKnown RBP16.43■□□□□ 0.22
PDGFRB-201ENST00000261799 SLKQ9H2G2 1235 aaPredicted RBP16.43■□□□□ 0.22
PDGFRB-201ENST00000261799 COG6Q9Y2V7 657 aa16.43■□□□□ 0.22
PDGFRB-201ENST00000261799 PLB1Q6P1J6 1458 aa16.43■□□□□ 0.22
PDGFRB-201ENST00000261799 IGHMBP2P38935 993 aaKnown RBP16.43■□□□□ 0.22
PDGFRB-201ENST00000261799 FOXD4L5Q5VV16 416 aaPredicted RBP16.43■□□□□ 0.22
PDGFRB-201ENST00000261799 FOXD4L4Q8WXT5 416 aaPredicted RBP16.43■□□□□ 0.22
PDGFRB-201ENST00000261799 BTBD11A6QL63 1104 aa16.43■□□□□ 0.22
PDGFRB-201ENST00000261799 FSD1Q9BTV5 496 aa16.43■□□□□ 0.22
PDGFRB-201ENST00000261799 ZSCAN29Q8IWY8 852 aaPredicted RBP16.43■□□□□ 0.22
PDGFRB-201ENST00000261799 CNTROBQ8N137 903 aa16.43■□□□□ 0.22
PDGFRB-201ENST00000261799 DAPK1P53355 1430 aa16.43■□□□□ 0.22
PDGFRB-201ENST00000261799 SULT6B1Q6IMI4 303 aa16.42■□□□□ 0.22
PDGFRB-201ENST00000261799 MYL6BP14649 208 aa16.42■□□□□ 0.22
PDGFRB-201ENST00000261799 CCDC57Q2TAC2 916 aa16.42■□□□□ 0.22
PDGFRB-201ENST00000261799 GRIN2AQ12879 1464 aa16.42■□□□□ 0.22
PDGFRB-201ENST00000261799 CUL7Q14999 1698 aa16.42■□□□□ 0.22
PDGFRB-201ENST00000261799 NUDT16Q96DE0 195 aaKnown RBP16.41■□□□□ 0.22
PDGFRB-201ENST00000261799 BCL11BQ9C0K0 894 aaPredicted RBP16.41■□□□□ 0.22
PDGFRB-201ENST00000261799 HDGFL1Q5TGJ6 251 aa16.41■□□□□ 0.22
PDGFRB-201ENST00000261799 CCDC141Q6ZP82 1450 aa16.41■□□□□ 0.22
PDGFRB-201ENST00000261799 HIP1O00291 1037 aa16.41■□□□□ 0.22
PDGFRB-201ENST00000261799 MPHOSPH10O00566 681 aaKnown RBP16.4■□□□□ 0.22
PDGFRB-201ENST00000261799 CLASRPQ8N2M8 674 aaKnown RBP16.4■□□□□ 0.22
PDGFRB-201ENST00000261799 TTLL12Q14166 644 aaPredicted RBP16.4■□□□□ 0.22
PDGFRB-201ENST00000261799 INTS3Q68E01 1043 aaKnown RBP16.4■□□□□ 0.22
PDGFRB-201ENST00000261799 NACAP1Q9BZK3 213 aa16.4■□□□□ 0.22
PDGFRB-201ENST00000261799 EXOC5O00471 708 aa16.4■□□□□ 0.22
PDGFRB-201ENST00000261799 ZSCAN25Q6NSZ9 544 aa16.4■□□□□ 0.22
PDGFRB-201ENST00000261799 AK7Q96M32 723 aa16.4■□□□□ 0.22
PDGFRB-201ENST00000261799 KIAA1107Q9UPP5 1409 aa16.4■□□□□ 0.22
PDGFRB-201ENST00000261799 PRKRIP1Q9H875 184 aaPredicted RBP16.39■□□□□ 0.21
PDGFRB-201ENST00000261799 GOLGA6L19H0YKK7 550 aa16.39■□□□□ 0.21
PDGFRB-201ENST00000261799 PHF8Q9UPP1 1060 aa16.39■□□□□ 0.21
PDGFRB-201ENST00000261799 PSMA5P28066 241 aa16.38■□□□□ 0.21
PDGFRB-201ENST00000261799 CEBPAP49715 358 aaPredicted RBP16.38■□□□□ 0.21
PDGFRB-201ENST00000261799 AMOTL2Q9Y2J4 779 aa16.38■□□□□ 0.21
PDGFRB-201ENST00000261799 CADPS2Q86UW7 1296 aa16.38■□□□□ 0.21
PDGFRB-201ENST00000261799 RPGRQ92834 1020 aaKnown RBP16.38■□□□□ 0.21
PDGFRB-201ENST00000261799 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.38■□□□□ 0.21
PDGFRB-201ENST00000261799 ARHGEF11O15085 1522 aa16.38■□□□□ 0.21
PDGFRB-201ENST00000261799 ABCA10Q8WWZ4 1543 aa16.38■□□□□ 0.21
PDGFRB-201ENST00000261799 C16orf71Q8IYS4 520 aaPredicted RBP16.37■□□□□ 0.21
PDGFRB-201ENST00000261799 BECN2A8MW95 431 aa16.36■□□□□ 0.21
PDGFRB-201ENST00000261799 CDK5RAP3Q96JB5 506 aa16.36■□□□□ 0.21
PDGFRB-201ENST00000261799 SURF6O75683 361 aaKnown RBP16.36■□□□□ 0.21
PDGFRB-201ENST00000261799 EPS15P42566 896 aa16.36■□□□□ 0.21
PDGFRB-201ENST00000261799 RRP12Q5JTH9 1297 aaKnown RBP16.36■□□□□ 0.21
PDGFRB-201ENST00000261799 GOLGA6L1Q8N7Z2 621 aa16.36■□□□□ 0.21
PDGFRB-201ENST00000261799 FAM135AQ9P2D6 1515 aa16.35■□□□□ 0.21
PDGFRB-201ENST00000261799 TWISTNBQ3B726 338 aaPredicted RBP16.35■□□□□ 0.21
PDGFRB-201ENST00000261799 ODF2Q5BJF6 829 aa16.35■□□□□ 0.21
PDGFRB-201ENST00000261799 KRT28Q7Z3Y7 464 aa16.35■□□□□ 0.21
PDGFRB-201ENST00000261799 RRP1P56182 461 aaKnown RBP16.35■□□□□ 0.21
PDGFRB-201ENST00000261799 IPO7O95373 1038 aaKnown RBP16.35■□□□□ 0.21
PDGFRB-201ENST00000261799 CT47A1Q5JQC4 288 aaPredicted RBP16.34■□□□□ 0.21
PDGFRB-201ENST00000261799 CRBNQ96SW2 442 aa16.34■□□□□ 0.21
PDGFRB-201ENST00000261799 TNRQ92752 1358 aa16.34■□□□□ 0.21
PDGFRB-201ENST00000261799 AAMPQ13685 434 aa16.34■□□□□ 0.21
PDGFRB-201ENST00000261799 CCDC61Q9Y6R9 512 aa16.34■□□□□ 0.21
PDGFRB-201ENST00000261799 GNAI2P04899 355 aa16.33■□□□□ 0.21
PDGFRB-201ENST00000261799 GZF1Q9H116 711 aaPredicted RBP16.33■□□□□ 0.21
PDGFRB-201ENST00000261799 GNAT3A8MTJ3 354 aa16.33■□□□□ 0.2
PDGFRB-201ENST00000261799 CCT4P50991 539 aaKnown RBP16.33■□□□□ 0.2
PDGFRB-201ENST00000261799 NBPF8Q3BBV2 869 aa16.33■□□□□ 0.2
PDGFRB-201ENST00000261799 AMOTQ4VCS5 1084 aa16.33■□□□□ 0.2
PDGFRB-201ENST00000261799 NBPF14Q5TI25 921 aa16.33■□□□□ 0.2
PDGFRB-201ENST00000261799 CCDC70Q6NSX1 233 aa16.33■□□□□ 0.2
PDGFRB-201ENST00000261799 CDK13Q14004 1512 aaKnown RBP16.33■□□□□ 0.2
PDGFRB-201ENST00000261799 FANCAO15360 1455 aa16.32■□□□□ 0.2
PDGFRB-201ENST00000261799 CCDC7Q96M83 1385 aa16.32■□□□□ 0.2
PDGFRB-201ENST00000261799 FOSBP53539 338 aa16.32■□□□□ 0.2
PDGFRB-201ENST00000261799 RAI14Q9P0K7 980 aa16.32■□□□□ 0.2
PDGFRB-201ENST00000261799 RRS1Q15050 365 aaKnown RBP16.32■□□□□ 0.2
PDGFRB-201ENST00000261799 SRCIN1Q9C0H9 1055 aa16.32■□□□□ 0.2
PDGFRB-201ENST00000261799 SMC3Q9UQE7 1217 aa16.32■□□□□ 0.2
PDGFRB-201ENST00000261799 A0A087WZG4 1122 aa16.32■□□□□ 0.2
PDGFRB-201ENST00000261799 ANKIB1Q9P2G1 1089 aa16.32■□□□□ 0.2
PDGFRB-201ENST00000261799 HSP90AB3PQ58FF7 597 aa16.31■□□□□ 0.2
PDGFRB-201ENST00000261799 SLC12A5Q9H2X9 1139 aa16.31■□□□□ 0.2
PDGFRB-201ENST00000261799 SLC4A2P04920 1241 aa16.31■□□□□ 0.2
PDGFRB-201ENST00000261799 KIF7Q2M1P5 1343 aa16.31■□□□□ 0.2
PDGFRB-201ENST00000261799 PAF1Q8N7H5 531 aa16.31■□□□□ 0.2
PDGFRB-201ENST00000261799 DDX11L8A8MPP1 907 aa16.3■□□□□ 0.2
PDGFRB-201ENST00000261799 POLD1P28340 1107 aa16.3■□□□□ 0.2
PDGFRB-201ENST00000261799 FAM161AQ3B820 660 aa16.3■□□□□ 0.2
PDGFRB-201ENST00000261799 SOGA3Q5TF21 947 aa16.3■□□□□ 0.2
PDGFRB-201ENST00000261799 MPRIPQ6WCQ1 1025 aa16.3■□□□□ 0.2
PDGFRB-201ENST00000261799 KRT18P05783 430 aaKnown RBP16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms