RNA–Protein interactions for RNA: ENST00000261427.9

UBE2K-201, Transcript of ubiquitin conjugating enzyme E2 K, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE2K, Length 5,245 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2K-201ENST00000261427 MBD3O95983 291 aa23.83■■□□□ 1.41
UBE2K-201ENST00000261427 DNAJC2Q99543 621 aaKnown RBP23.83■■□□□ 1.4
UBE2K-201ENST00000261427 RBM42Q9BTD8 480 aaKnown RBP23.83■■□□□ 1.4
UBE2K-201ENST00000261427 HDGFL1Q5TGJ6 251 aa23.82■■□□□ 1.4
UBE2K-201ENST00000261427 GNL3LQ9NVN8 582 aaKnown RBP23.82■■□□□ 1.4
UBE2K-201ENST00000261427 CDR1P51861 262 aa23.82■■□□□ 1.4
UBE2K-201ENST00000261427 CT47A1Q5JQC4 288 aaPredicted RBP23.82■■□□□ 1.4
UBE2K-201ENST00000261427 TEX35Q5T0J7 233 aa23.82■■□□□ 1.4
UBE2K-201ENST00000261427 EFCAB5A4FU69 1503 aa23.81■■□□□ 1.4
UBE2K-201ENST00000261427 CCDC158Q5M9N0 1113 aa23.81■■□□□ 1.4
UBE2K-201ENST00000261427 SAMD1Q6SPF0 538 aaPredicted RBP23.81■■□□□ 1.4
UBE2K-201ENST00000261427 ARGLU1Q9NWB6 273 aaPredicted RBP23.81■■□□□ 1.4
UBE2K-201ENST00000261427 OFD1O75665 1012 aa23.81■■□□□ 1.4
UBE2K-201ENST00000261427 CDK19Q9BWU1 502 aa23.81■■□□□ 1.4
UBE2K-201ENST00000261427 IFT57Q9NWB7 429 aa23.81■■□□□ 1.4
UBE2K-201ENST00000261427 CFTRP13569 1480 aa23.81■■□□□ 1.4
UBE2K-201ENST00000261427 NAP1L1P55209 391 aaKnown RBP23.8■■□□□ 1.4
UBE2K-201ENST00000261427 MNS1Q8NEH6 495 aa23.8■■□□□ 1.4
UBE2K-201ENST00000261427 RPGRIP1LQ68CZ1 1315 aa23.8■■□□□ 1.4
UBE2K-201ENST00000261427 NEK4P51957 841 aa23.8■■□□□ 1.4
UBE2K-201ENST00000261427 CDCA7LQ96GN5 454 aa23.8■■□□□ 1.4
UBE2K-201ENST00000261427 ACBD3Q9H3P7 528 aa23.8■■□□□ 1.4
UBE2K-201ENST00000261427 EPS15P42566 896 aa23.79■■□□□ 1.4
UBE2K-201ENST00000261427 PDZRN3Q9UPQ7 1066 aa23.79■■□□□ 1.4
UBE2K-201ENST00000261427 EHBP1L1Q8N3D4 1523 aa23.79■■□□□ 1.4
UBE2K-201ENST00000261427 NBPF1Q3BBV0 1214 aa23.79■■□□□ 1.4
UBE2K-201ENST00000261427 SULT6B1Q6IMI4 303 aa23.79■■□□□ 1.4
UBE2K-201ENST00000261427 WDR63Q8IWG1 891 aa23.79■■□□□ 1.4
UBE2K-201ENST00000261427 KLHL34Q8N239 644 aa23.79■■□□□ 1.4
UBE2K-201ENST00000261427 SLC4A2P04920 1241 aa23.79■■□□□ 1.4
UBE2K-201ENST00000261427 IKQ13123 557 aaPredicted RBP23.79■■□□□ 1.4
UBE2K-201ENST00000261427 DDX24Q9GZR7 859 aaKnown RBP eCLIP23.79■■□□□ 1.42e-10■□□□□ 10.2
UBE2K-201ENST00000261427 MRE11P49959 708 aa23.79■■□□□ 1.4
UBE2K-201ENST00000261427 SLC12A5Q9H2X9 1139 aa23.79■■□□□ 1.4
UBE2K-201ENST00000261427 KINO60870 393 aaKnown RBP23.78■■□□□ 1.4
UBE2K-201ENST00000261427 CNNM1Q9NRU3 951 aa23.78■■□□□ 1.4
UBE2K-201ENST00000261427 ODF2Q5BJF6 829 aa23.77■■□□□ 1.4
UBE2K-201ENST00000261427 CABP1Q9NZU7 370 aa23.77■■□□□ 1.4
UBE2K-201ENST00000261427 SPG7Q9UQ90 795 aa23.77■■□□□ 1.4
UBE2K-201ENST00000261427 FAM43AQ8N2R8 423 aa23.77■■□□□ 1.4
UBE2K-201ENST00000261427 RUFY1Q96T51 708 aa23.77■■□□□ 1.4
UBE2K-201ENST00000261427 ZNF396Q96N95 335 aaPredicted RBP23.77■■□□□ 1.4
UBE2K-201ENST00000261427 SRCIN1Q9C0H9 1055 aa23.77■■□□□ 1.4
UBE2K-201ENST00000261427 NOB1Q9ULX3 412 aaKnown RBP23.77■■□□□ 1.39
UBE2K-201ENST00000261427 TXLNAP40222 546 aa23.76■■□□□ 1.39
UBE2K-201ENST00000261427 CABP4P57796 275 aa23.76■■□□□ 1.39
UBE2K-201ENST00000261427 TTC39AQ5SRH9 613 aa23.76■■□□□ 1.39
UBE2K-201ENST00000261427 CNKSR2Q8WXI2 1034 aa23.76■■□□□ 1.39
UBE2K-201ENST00000261427 CCDC39Q9UFE4 941 aa23.76■■□□□ 1.39
UBE2K-201ENST00000261427 TROQ12816 1431 aaPredicted RBP23.76■■□□□ 1.39
UBE2K-201ENST00000261427 FAM177BA6PVY3 158 aa23.76■■□□□ 1.39
UBE2K-201ENST00000261427 NFKBIBQ15653 356 aa23.76■■□□□ 1.39
UBE2K-201ENST00000261427 ZNF530Q6P9A1 599 aaPredicted RBP23.76■■□□□ 1.39
UBE2K-201ENST00000261427 STRN4Q9NRL3 753 aa23.76■■□□□ 1.39
UBE2K-201ENST00000261427 IFT140Q96RY7 1462 aa23.75■■□□□ 1.39
UBE2K-201ENST00000261427 AK7Q96M32 723 aa23.75■■□□□ 1.39
UBE2K-201ENST00000261427 RTEL1-TNFRSF6BF6WH68 1400 aa23.75■■□□□ 1.39
UBE2K-201ENST00000261427 CCDC173Q0VFZ6 552 aa23.75■■□□□ 1.39
UBE2K-201ENST00000261427 ARAP1Q96P48 1450 aa23.74■■□□□ 1.39
UBE2K-201ENST00000261427 ATAD2Q6PL18 1390 aa23.74■■□□□ 1.39
UBE2K-201ENST00000261427 PIP4K2AP48426 406 aaPredicted RBP23.74■■□□□ 1.39
UBE2K-201ENST00000261427 NASPP49321 788 aaPredicted RBP23.74■■□□□ 1.39
UBE2K-201ENST00000261427 ANKRD30BQ9BXX2 1392 aa23.73■■□□□ 1.39
UBE2K-201ENST00000261427 ANKRD1Q15327 319 aa23.73■■□□□ 1.39
UBE2K-201ENST00000261427 LRRCC1Q9C099 1032 aa23.73■■□□□ 1.39
UBE2K-201ENST00000261427 JMYQ8N9B5 988 aa23.73■■□□□ 1.39
UBE2K-201ENST00000261427 NACAP1Q9BZK3 213 aa23.73■■□□□ 1.39
UBE2K-201ENST00000261427 MTMR7Q9Y216 660 aa23.73■■□□□ 1.39
UBE2K-201ENST00000261427 MRC2Q9UBG0 1479 aa23.72■■□□□ 1.39
UBE2K-201ENST00000261427 ZNF771Q7L3S4 317 aaPredicted RBP23.72■■□□□ 1.39
UBE2K-201ENST00000261427 CDK5RAP3Q96JB5 506 aa23.72■■□□□ 1.39
UBE2K-201ENST00000261427 TOM1L2Q6ZVM7 507 aa23.71■■□□□ 1.39
UBE2K-201ENST00000261427 TSR2Q969E8 191 aaKnown RBP23.71■■□□□ 1.39
UBE2K-201ENST00000261427 FILIP1LQ4L180 1135 aa23.71■■□□□ 1.39
UBE2K-201ENST00000261427 PDILTQ8N807 584 aa23.71■■□□□ 1.39
UBE2K-201ENST00000261427 ZNF428Q96B54 188 aa23.71■■□□□ 1.39
UBE2K-201ENST00000261427 CYP46A1Q9Y6A2 500 aa23.71■■□□□ 1.39
UBE2K-201ENST00000261427 ANKLE2Q86XL3 938 aa23.7■■□□□ 1.38
UBE2K-201ENST00000261427 ZSCAN25Q6NSZ9 544 aa23.7■■□□□ 1.38
UBE2K-201ENST00000261427 STK38Q15208 465 aa23.7■■□□□ 1.38
UBE2K-201ENST00000261427 HSP90B2PQ58FF3 399 aa23.7■■□□□ 1.38
UBE2K-201ENST00000261427 ATF7IPQ6VMQ6 1270 aa23.7■■□□□ 1.38
UBE2K-201ENST00000261427 C1orf115Q9H7X2 142 aa23.7■■□□□ 1.38
UBE2K-201ENST00000261427 RRP12Q5JTH9 1297 aaKnown RBP23.69■■□□□ 1.38
UBE2K-201ENST00000261427 ERBINQ96RT1 1412 aa23.69■■□□□ 1.38
UBE2K-201ENST00000261427 TRIM5Q9C035 493 aa23.69■■□□□ 1.38
UBE2K-201ENST00000261427 TRAK2O60296 914 aa23.68■■□□□ 1.38
UBE2K-201ENST00000261427 ATP2B1P20020 1258 aa23.68■■□□□ 1.38
UBE2K-201ENST00000261427 AEBP1Q8IUX7 1158 aa23.68■■□□□ 1.38
UBE2K-201ENST00000261427 RDXP35241 583 aaKnown RBP23.68■■□□□ 1.38
UBE2K-201ENST00000261427 TRIM22Q8IYM9 498 aa23.68■■□□□ 1.38
UBE2K-201ENST00000261427 SMARCE1Q969G3 411 aa23.67■■□□□ 1.38
UBE2K-201ENST00000261427 FAM13BQ9NYF5 915 aa23.67■■□□□ 1.38
UBE2K-201ENST00000261427 CCP110O43303 1012 aa23.67■■□□□ 1.38
UBE2K-201ENST00000261427 POGZQ7Z3K3 1410 aa23.67■■□□□ 1.38
UBE2K-201ENST00000261427 MAGEC2Q9UBF1 373 aaPredicted RBP23.67■■□□□ 1.38
UBE2K-201ENST00000261427 CCAR1Q8IX12 1150 aaKnown RBP23.67■■□□□ 1.38
UBE2K-201ENST00000261427 DHX8Q14562 1220 aaKnown RBP23.66■■□□□ 1.38
UBE2K-201ENST00000261427 FCHSD2O94868 740 aa23.66■■□□□ 1.38
UBE2K-201ENST00000261427 CCDC57Q2TAC2 916 aa23.66■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms