RNA–Protein interactions for RNA: ENST00000259803.7

GCM1-201, Transcript of glial cells missing homolog 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GCM1, Length 2,765 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCM1-201ENST00000259803 REREQ9P2R6 1566 aa13.54□□□□□ -0.24
GCM1-201ENST00000259803 RNF17Q9BXT8 1623 aaKnown RBP13.54□□□□□ -0.24
GCM1-201ENST00000259803 EIF2AK4Q9P2K8 1649 aaKnown RBP13.54□□□□□ -0.24
GCM1-201ENST00000259803 CHGAP10645 457 aaKnown RBP13.54□□□□□ -0.24
GCM1-201ENST00000259803 PLA2R1Q13018 1463 aa13.54□□□□□ -0.24
GCM1-201ENST00000259803 SPTY2D1Q68D10 685 aaPredicted RBP13.54□□□□□ -0.24
GCM1-201ENST00000259803 C1orf115Q9H7X2 142 aa13.53□□□□□ -0.24
GCM1-201ENST00000259803 BSDC1Q9NW68 430 aaPredicted RBP13.52□□□□□ -0.24
GCM1-201ENST00000259803 BCORL1Q5H9F3 1711 aa13.52□□□□□ -0.25
GCM1-201ENST00000259803 VWDEQ8N2E2 1590 aa13.52□□□□□ -0.25
GCM1-201ENST00000259803 IQGAP3Q86VI3 1631 aa13.52□□□□□ -0.25
GCM1-201ENST00000259803 KDM5DQ9BY66 1539 aa13.51□□□□□ -0.25
GCM1-201ENST00000259803 E9PCH4 1651 aa13.51□□□□□ -0.25
GCM1-201ENST00000259803 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.51□□□□□ -0.25
GCM1-201ENST00000259803 IDI1Q13907 227 aa13.5□□□□□ -0.25
GCM1-201ENST00000259803 ARMCX6Q7L4S7 300 aa13.5□□□□□ -0.25
GCM1-201ENST00000259803 ANKRD30BQ9BXX2 1392 aa13.5□□□□□ -0.25
GCM1-201ENST00000259803 RIMS1Q86UR5 1692 aaKnown RBP13.5□□□□□ -0.25
GCM1-201ENST00000259803 TERF1P54274 439 aa13.5□□□□□ -0.25
GCM1-201ENST00000259803 IRX5P78411 483 aaPredicted RBP13.5□□□□□ -0.25
GCM1-201ENST00000259803 CHMP4CQ96CF2 233 aa13.5□□□□□ -0.25
GCM1-201ENST00000259803 ZKSCAN8Q15776 578 aaPredicted RBP13.49□□□□□ -0.25
GCM1-201ENST00000259803 RNF217Q8TC41 542 aa13.49□□□□□ -0.25
GCM1-201ENST00000259803 EFCAB6Q5THR3 1501 aa13.49□□□□□ -0.25
GCM1-201ENST00000259803 FER1L4A9Z1Z3 1794 aa13.49□□□□□ -0.25
GCM1-201ENST00000259803 NRDCO43847 1150 aa13.49□□□□□ -0.25
GCM1-201ENST00000259803 ZNF513Q8N8E2 541 aaPredicted RBP13.48□□□□□ -0.25
GCM1-201ENST00000259803 CAMSAP1Q5T5Y3 1602 aa13.48□□□□□ -0.25
GCM1-201ENST00000259803 L1TD1Q5T7N2 865 aaKnown RBP13.48□□□□□ -0.25
GCM1-201ENST00000259803 RIPOR2Q9Y4F9 1068 aa13.48□□□□□ -0.25
GCM1-201ENST00000259803 MYBPC2Q14324 1141 aa13.46□□□□□ -0.25
GCM1-201ENST00000259803 PTPRMP28827 1452 aa13.46□□□□□ -0.25
GCM1-201ENST00000259803 ZBTB22O15209 634 aa13.46□□□□□ -0.26
GCM1-201ENST00000259803 CEP83Q9Y592 693 aa13.46□□□□□ -0.26
GCM1-201ENST00000259803 TET3O43151 1660 aa13.45□□□□□ -0.26
GCM1-201ENST00000259803 ADAMTSL3P82987 1691 aa13.45□□□□□ -0.26
GCM1-201ENST00000259803 HSPA2P54652 639 aa13.45□□□□□ -0.26
GCM1-201ENST00000259803 TSPAN18Q96SJ8 248 aa13.45□□□□□ -0.26
GCM1-201ENST00000259803 RBM28Q9NW13 759 aaKnown RBP13.45□□□□□ -0.26
GCM1-201ENST00000259803 ZBTB12Q9Y330 459 aaPredicted RBP13.45□□□□□ -0.26
GCM1-201ENST00000259803 EP400NLQ6ZTU2 488 aa13.45□□□□□ -0.26
GCM1-201ENST00000259803 MTA1Q13330 715 aa13.44□□□□□ -0.26
GCM1-201ENST00000259803 STK26Q9P289 416 aa13.44□□□□□ -0.26
GCM1-201ENST00000259803 CCDC144AA2RUR9 1427 aa13.44□□□□□ -0.26
GCM1-201ENST00000259803 LMTK2Q8IWU2 1503 aa13.44□□□□□ -0.26
GCM1-201ENST00000259803 POLD1P28340 1107 aa13.43□□□□□ -0.26
GCM1-201ENST00000259803 SETDB1Q15047 1291 aa13.43□□□□□ -0.26
GCM1-201ENST00000259803 C3P01024 1663 aa13.43□□□□□ -0.26
GCM1-201ENST00000259803 ERVK-7P63135 1459 aa13.43□□□□□ -0.26
GCM1-201ENST00000259803 SYNMO15061 1565 aa13.43□□□□□ -0.26
GCM1-201ENST00000259803 HDAC1Q13547 482 aaPredicted RBP13.43□□□□□ -0.26
GCM1-201ENST00000259803 L3MBTL2Q969R5 705 aa13.43□□□□□ -0.26
GCM1-201ENST00000259803 TSPYL1Q9H0U9 437 aa13.43□□□□□ -0.26
GCM1-201ENST00000259803 STAG3Q9UJ98 1225 aa13.43□□□□□ -0.26
GCM1-201ENST00000259803 ANKRD23Q86SG2 305 aa13.43□□□□□ -0.26
GCM1-201ENST00000259803 EFCC1Q9HA90 598 aa13.42□□□□□ -0.26
GCM1-201ENST00000259803 MRVI1Q9Y6F6 885 aa13.42□□□□□ -0.26
GCM1-201ENST00000259803 TNRQ92752 1358 aa13.42□□□□□ -0.26
GCM1-201ENST00000259803 NOS1P29475 1434 aa13.41□□□□□ -0.26
GCM1-201ENST00000259803 CGNQ9P2M7 1197 aaKnown RBP13.41□□□□□ -0.26
GCM1-201ENST00000259803 PTPRTO14522 1441 aa13.41□□□□□ -0.26
GCM1-201ENST00000259803 CLTCL1P53675 1640 aa13.4□□□□□ -0.26
GCM1-201ENST00000259803 ARHGAP31Q2M1Z3 1444 aa13.4□□□□□ -0.26
GCM1-201ENST00000259803 PREX1Q8TCU6 1659 aa13.4□□□□□ -0.26
GCM1-201ENST00000259803 CNTLNQ9NXG0 1405 aa13.4□□□□□ -0.26
GCM1-201ENST00000259803 BRD1O95696 1058 aa13.39□□□□□ -0.27
GCM1-201ENST00000259803 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.39□□□□□ -0.27
GCM1-201ENST00000259803 ESPNB1AK53 854 aa13.39□□□□□ -0.27
GCM1-201ENST00000259803 MKL1Q969V6 931 aa13.39□□□□□ -0.27
GCM1-201ENST00000259803 PPP4R2Q9NY27 417 aa13.39□□□□□ -0.27
GCM1-201ENST00000259803 NFKBIBQ15653 356 aa13.38□□□□□ -0.27
GCM1-201ENST00000259803 DNAJC14Q6Y2X3 702 aaPredicted RBP13.38□□□□□ -0.27
GCM1-201ENST00000259803 MYCBPQ99417 103 aaPredicted RBP13.38□□□□□ -0.27
GCM1-201ENST00000259803 CCDC94Q9BW85 323 aaPredicted RBP13.38□□□□□ -0.27
GCM1-201ENST00000259803 ZC3H13Q5T200 1668 aaKnown RBP13.38□□□□□ -0.27
GCM1-201ENST00000259803 SPHKAPQ2M3C7 1700 aa13.38□□□□□ -0.27
GCM1-201ENST00000259803 ARHGEF1Q92888 912 aaKnown RBP13.38□□□□□ -0.27
GCM1-201ENST00000259803 CCDC172P0C7W6 258 aa13.37□□□□□ -0.27
GCM1-201ENST00000259803 CCDC125Q86Z20 511 aa13.37□□□□□ -0.27
GCM1-201ENST00000259803 SDR16C5Q8N3Y7 309 aa13.37□□□□□ -0.27
GCM1-201ENST00000259803 RPRD2Q5VT52 1461 aaKnown RBP13.37□□□□□ -0.27
GCM1-201ENST00000259803 TRPM2O94759 1503 aa13.37□□□□□ -0.27
GCM1-201ENST00000259803 BORCS6Q96GS4 357 aa13.37□□□□□ -0.27
GCM1-201ENST00000259803 CT47A1Q5JQC4 288 aaPredicted RBP13.36□□□□□ -0.27
GCM1-201ENST00000259803 TONSLQ96HA7 1378 aa13.36□□□□□ -0.27
GCM1-201ENST00000259803 NME8Q8N427 588 aa13.36□□□□□ -0.27
GCM1-201ENST00000259803 SPATA31D1Q6ZQQ2 1576 aa13.35□□□□□ -0.27
GCM1-201ENST00000259803 LTKP29376 864 aa13.35□□□□□ -0.27
GCM1-201ENST00000259803 RIPK4P57078 832 aa13.35□□□□□ -0.27
GCM1-201ENST00000259803 ADGRF5Q8IZF2 1346 aa13.35□□□□□ -0.27
GCM1-201ENST00000259803 NBPF8Q3BBV2 869 aa13.35□□□□□ -0.27
GCM1-201ENST00000259803 KIAA1211Q6ZU35 1233 aa13.35□□□□□ -0.27
GCM1-201ENST00000259803 ITFG2Q969R8 447 aa13.35□□□□□ -0.27
GCM1-201ENST00000259803 BRPF1P55201 1214 aaPredicted RBP13.34□□□□□ -0.27
GCM1-201ENST00000259803 PIK3C2BO00750 1634 aa13.34□□□□□ -0.27
GCM1-201ENST00000259803 SPATA31E1Q6ZUB1 1445 aa13.34□□□□□ -0.27
GCM1-201ENST00000259803 MSL3Q8N5Y2 521 aaKnown RBP13.33□□□□□ -0.27
GCM1-201ENST00000259803 HIRIP3Q9BW71 556 aaPredicted RBP13.33□□□□□ -0.27
GCM1-201ENST00000259803 MROH2AA6NES4 1674 aa13.33□□□□□ -0.28
GCM1-201ENST00000259803 FAM13BQ9NYF5 915 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms