RNA–Protein interactions for RNA: ENST00000258909.13

TM6SF1-201, Transcript of transmembrane 6 superfamily member 1, humanhuman

TSL 1 (best)

Gene TM6SF1, Length 1,469 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM6SF1-201ENST00000258909 BRWD3Q6RI45 1802 aa27.42■■□□□ 1.98
TM6SF1-201ENST00000258909 TOPAZ1Q8N9V7 1692 aa27.41■■□□□ 1.98
TM6SF1-201ENST00000258909 BTG4Q9NY30 223 aa27.41■■□□□ 1.98
TM6SF1-201ENST00000258909 CCDC61Q9Y6R9 512 aa27.41■■□□□ 1.98
TM6SF1-201ENST00000258909 CRYBG1Q9Y4K1 1723 aa27.41■■□□□ 1.98
TM6SF1-201ENST00000258909 ACEP12821 1306 aa27.41■■□□□ 1.98
TM6SF1-201ENST00000258909 CENPJQ9HC77 1338 aaPredicted RBP27.41■■□□□ 1.98
TM6SF1-201ENST00000258909 NUTM2GQ5VZR2 741 aa27.39■■□□□ 1.98
TM6SF1-201ENST00000258909 SEPT12Q8IYM1 358 aa27.39■■□□□ 1.98
TM6SF1-201ENST00000258909 NRAPQ86VF7 1730 aa27.38■■□□□ 1.97
TM6SF1-201ENST00000258909 COL14A1Q05707 1796 aaKnown RBP27.38■■□□□ 1.97
TM6SF1-201ENST00000258909 SRPK2P78362 688 aaKnown RBP27.38■■□□□ 1.97
TM6SF1-201ENST00000258909 NBPF8Q3BBV2 869 aa27.38■■□□□ 1.97
TM6SF1-201ENST00000258909 CABP2Q9NPB3 220 aa27.38■■□□□ 1.97
TM6SF1-201ENST00000258909 POLR3AO14802 1390 aaPredicted RBP27.36■■□□□ 1.97
TM6SF1-201ENST00000258909 QRICH2Q9H0J4 1663 aa27.36■■□□□ 1.97
TM6SF1-201ENST00000258909 PLEKHG3A1L390 1219 aa27.36■■□□□ 1.97
TM6SF1-201ENST00000258909 PRDM11Q9NQV5 511 aa27.34■■□□□ 1.97
TM6SF1-201ENST00000258909 ONECUT3O60422 494 aaPredicted RBP27.33■■□□□ 1.97
TM6SF1-201ENST00000258909 TRPM1Q7Z4N2 1603 aa27.33■■□□□ 1.97
TM6SF1-201ENST00000258909 A0A0G2JS52 829 aa27.32■■□□□ 1.96
TM6SF1-201ENST00000258909 MYT1Q01538 1121 aa27.32■■□□□ 1.96
TM6SF1-201ENST00000258909 PHRF1Q9P1Y6 1649 aaKnown RBP27.32■■□□□ 1.96
TM6SF1-201ENST00000258909 PPIP5K1Q6PFW1 1433 aa27.32■■□□□ 1.96
TM6SF1-201ENST00000258909 CHRNA2Q15822 529 aa27.32■■□□□ 1.96
TM6SF1-201ENST00000258909 FAM98CQ17RN3 349 aaKnown RBP27.32■■□□□ 1.96
TM6SF1-201ENST00000258909 KIAA0232Q92628 1395 aa27.31■■□□□ 1.96
TM6SF1-201ENST00000258909 ZC3H6P61129 1189 aaKnown RBP27.31■■□□□ 1.96
TM6SF1-201ENST00000258909 CCDC125Q86Z20 511 aa27.31■■□□□ 1.96
TM6SF1-201ENST00000258909 ABTB2Q8N961 1025 aa27.29■■□□□ 1.96
TM6SF1-201ENST00000258909 KRT27Q7Z3Y8 459 aa27.28■■□□□ 1.96
TM6SF1-201ENST00000258909 ROCK2O75116 1388 aaKnown RBP27.28■■□□□ 1.96
TM6SF1-201ENST00000258909 CABP1Q9NZU7 370 aa27.25■■□□□ 1.95
TM6SF1-201ENST00000258909 SPATA31A5Q5VU36 1347 aa27.25■■□□□ 1.95
TM6SF1-201ENST00000258909 SPATA31A7Q8IWB4 1347 aa27.25■■□□□ 1.95
TM6SF1-201ENST00000258909 BLMP54132 1417 aaPredicted RBP27.25■■□□□ 1.95
TM6SF1-201ENST00000258909 STRN4Q9NRL3 753 aa27.24■■□□□ 1.95
TM6SF1-201ENST00000258909 SRCAPQ6ZRS2 3230 aa27.23■■□□□ 1.95
TM6SF1-201ENST00000258909 DEFB132Q7Z7B7 95 aa27.22■■□□□ 1.95
TM6SF1-201ENST00000258909 NRKQ7Z2Y5 1582 aa27.21■■□□□ 1.95
TM6SF1-201ENST00000258909 EVC2Q86UK5 1308 aa27.21■■□□□ 1.95
TM6SF1-201ENST00000258909 FAM182BQ5T319 152 aa27.19■■□□□ 1.94
TM6SF1-201ENST00000258909 NLRP13Q86W25 1043 aa27.19■■□□□ 1.94
TM6SF1-201ENST00000258909 ZRANB1Q9UGI0 708 aa27.19■■□□□ 1.94
TM6SF1-201ENST00000258909 USP19O94966 1318 aa27.18■■□□□ 1.94
TM6SF1-201ENST00000258909 SF3B2Q13435 895 aaKnown RBP27.18■■□□□ 1.94
TM6SF1-201ENST00000258909 SPATA31A1Q5TZJ5 1347 aa27.17■■□□□ 1.94
TM6SF1-201ENST00000258909 USP6P35125 1406 aa27.17■■□□□ 1.94
TM6SF1-201ENST00000258909 USP35Q9P2H5 1018 aa27.17■■□□□ 1.94
TM6SF1-201ENST00000258909 EVA1CP58658 441 aa27.16■■□□□ 1.94
TM6SF1-201ENST00000258909 GCP02774 474 aa27.15■■□□□ 1.94
TM6SF1-201ENST00000258909 THSD7AQ9UPZ6 1657 aa27.15■■□□□ 1.94
TM6SF1-201ENST00000258909 CAMTA1Q9Y6Y1 1673 aa27.15■■□□□ 1.94
TM6SF1-201ENST00000258909 NLRP6P59044 892 aa27.13■■□□□ 1.93
TM6SF1-201ENST00000258909 ZBTB7CA1YPR0 619 aa27.13■■□□□ 1.93
TM6SF1-201ENST00000258909 CPDO75976 1380 aa27.12■■□□□ 1.93
TM6SF1-201ENST00000258909 LARP1Q6PKG0 1096 aaKnown RBP27.12■■□□□ 1.93
TM6SF1-201ENST00000258909 BRD4O60885 1362 aaPredicted RBP27.12■■□□□ 1.93
TM6SF1-201ENST00000258909 SSH2Q76I76 1423 aa27.12■■□□□ 1.93
TM6SF1-201ENST00000258909 LMO7Q8WWI1 1683 aa27.11■■□□□ 1.93
TM6SF1-201ENST00000258909 CARD11Q9BXL7 1154 aa27.11■■□□□ 1.93
TM6SF1-201ENST00000258909 TONSLQ96HA7 1378 aa27.1■■□□□ 1.93
TM6SF1-201ENST00000258909 PIK3C2AO00443 1686 aa27.08■■□□□ 1.93
TM6SF1-201ENST00000258909 AKAP12Q02952 1782 aa27.06■■□□□ 1.92
TM6SF1-201ENST00000258909 TRIM26Q12899 539 aaPredicted RBP27.06■■□□□ 1.92
TM6SF1-201ENST00000258909 TTC21BQ7Z4L5 1316 aa27.05■■□□□ 1.92
TM6SF1-201ENST00000258909 SLIT3O75094 1523 aa27.04■■□□□ 1.92
TM6SF1-201ENST00000258909 BAG6P46379 1132 aa27.04■■□□□ 1.92
TM6SF1-201ENST00000258909 ZNF692Q9BU19 519 aaPredicted RBP27.04■■□□□ 1.92
TM6SF1-201ENST00000258909 BARGINQ6ZT62 677 aa27.03■■□□□ 1.92
TM6SF1-201ENST00000258909 TCP11L2Q8N4U5 519 aa27.03■■□□□ 1.92
TM6SF1-201ENST00000258909 COL5A2P05997 1499 aaPredicted RBP27.03■■□□□ 1.92
TM6SF1-201ENST00000258909 RGPD1P0DJD0 1748 aa27.03■■□□□ 1.92
TM6SF1-201ENST00000258909 SOX12O15370 315 aa27.01■■□□□ 1.91
TM6SF1-201ENST00000258909 EN1Q05925 392 aaPredicted RBP27.01■■□□□ 1.91
TM6SF1-201ENST00000258909 CPSF1Q10570 1443 aaKnown RBP27.01■■□□□ 1.91
TM6SF1-201ENST00000258909 KTN1Q86UP2 1357 aaKnown RBP27■■□□□ 1.91
TM6SF1-201ENST00000258909 SBNO2Q9Y2G9 1366 aa27■■□□□ 1.91
TM6SF1-201ENST00000258909 PDE3BQ13370 1112 aa26.99■■□□□ 1.91
TM6SF1-201ENST00000258909 AATKQ6ZMQ8 1374 aa26.98■■□□□ 1.91
TM6SF1-201ENST00000258909 TRIM37O94972 964 aa26.98■■□□□ 1.91
TM6SF1-201ENST00000258909 TNS1Q9HBL0 1735 aaKnown RBP26.97■■□□□ 1.91
TM6SF1-201ENST00000258909 FAM196AQ6ZSG2 479 aa26.97■■□□□ 1.91
TM6SF1-201ENST00000258909 AXIN2Q9Y2T1 843 aa26.97■■□□□ 1.91
TM6SF1-201ENST00000258909 COL18A1P39060 1754 aa26.97■■□□□ 1.91
TM6SF1-201ENST00000258909 TMC1Q8TDI8 760 aa26.96■■□□□ 1.91
TM6SF1-201ENST00000258909 TTC21AQ8NDW8 1320 aa26.96■■□□□ 1.91
TM6SF1-201ENST00000258909 CRB1P82279 1406 aa26.95■■□□□ 1.91
TM6SF1-201ENST00000258909 SUGP2Q8IX01 1082 aaKnown RBP eCLIP26.95■■□□□ 1.91
TM6SF1-201ENST00000258909 THRAP3Q9Y2W1 955 aaKnown RBP26.95■■□□□ 1.91
TM6SF1-201ENST00000258909 MON2Q7Z3U7 1717 aa26.95■■□□□ 1.9
TM6SF1-201ENST00000258909 RGPD5Q99666 1765 aa26.94■■□□□ 1.9
TM6SF1-201ENST00000258909 PSDA5PKW4 1024 aaPredicted RBP26.93■■□□□ 1.9
TM6SF1-201ENST00000258909 TOM1L2Q6ZVM7 507 aa26.93■■□□□ 1.9
TM6SF1-201ENST00000258909 ARHGEF25Q86VW2 580 aa26.93■■□□□ 1.9
TM6SF1-201ENST00000258909 KCNH5Q8NCM2 988 aa26.93■■□□□ 1.9
TM6SF1-201ENST00000258909 SLC12A5Q9H2X9 1139 aa26.93■■□□□ 1.9
TM6SF1-201ENST00000258909 CD163L1Q9NR16 1453 aa26.92■■□□□ 1.9
TM6SF1-201ENST00000258909 EZH2Q15910 746 aaKnown RBP26.92■■□□□ 1.9
TM6SF1-201ENST00000258909 PARP4Q9UKK3 1724 aaKnown RBP26.9■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms