RNA–Protein interactions for RNA: ENST00000257414.12

SEMA6A-201, Transcript of semaphorin 6A, humanhuman

TSL 1 (best) BASIC

Gene SEMA6A, Length 4,256 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6A-201ENST00000257414 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.42□□□□□ -0.42
SEMA6A-201ENST00000257414 KCNJ4P48050 445 aa12.42□□□□□ -0.42
SEMA6A-201ENST00000257414 CCDC27Q2M243 656 aa12.42□□□□□ -0.42
SEMA6A-201ENST00000257414 NSD2O96028 1365 aa12.42□□□□□ -0.42
SEMA6A-201ENST00000257414 MCTP1Q6DN14 999 aa12.42□□□□□ -0.42
SEMA6A-201ENST00000257414 RILPL2Q969X0 211 aa12.41□□□□□ -0.42
SEMA6A-201ENST00000257414 NUCB2P80303 420 aa12.41□□□□□ -0.42
SEMA6A-201ENST00000257414 PREX2Q70Z35 1606 aa12.41□□□□□ -0.42
SEMA6A-201ENST00000257414 OSCARQ8IYS5 282 aa12.41□□□□□ -0.42
SEMA6A-201ENST00000257414 GRPEL1Q9HAV7 217 aa12.41□□□□□ -0.42
SEMA6A-201ENST00000257414 RTEL1-TNFRSF6BF6WH68 1400 aa12.41□□□□□ -0.42
SEMA6A-201ENST00000257414 AMPHP49418 695 aa12.4□□□□□ -0.42
SEMA6A-201ENST00000257414 KIAA1211Q6ZU35 1233 aa12.4□□□□□ -0.42
SEMA6A-201ENST00000257414 TRMT2AQ8IZ69 625 aaKnown RBP12.4□□□□□ -0.42
SEMA6A-201ENST00000257414 K7ELQ4 463 aaPredicted RBP12.4□□□□□ -0.42
SEMA6A-201ENST00000257414 HSP90AA2PQ14568 343 aaPredicted RBP12.4□□□□□ -0.42
SEMA6A-201ENST00000257414 NFE2L2Q16236 605 aa12.4□□□□□ -0.42
SEMA6A-201ENST00000257414 SYAP1Q96A49 352 aaPredicted RBP12.4□□□□□ -0.42
SEMA6A-201ENST00000257414 ZNF428Q96B54 188 aa12.4□□□□□ -0.42
SEMA6A-201ENST00000257414 ANKRD36BQ8N2N9 1353 aa12.4□□□□□ -0.43
SEMA6A-201ENST00000257414 ALDH1L2Q3SY69 923 aa12.4□□□□□ -0.43
SEMA6A-201ENST00000257414 TTC37Q6PGP7 1564 aa12.39□□□□□ -0.43
SEMA6A-201ENST00000257414 HDAC1Q13547 482 aaPredicted RBP12.39□□□□□ -0.43
SEMA6A-201ENST00000257414 IDI1Q13907 227 aa12.39□□□□□ -0.43
SEMA6A-201ENST00000257414 FOXD4L6Q3SYB3 417 aaPredicted RBP12.39□□□□□ -0.43
SEMA6A-201ENST00000257414 FOXD4L3Q6VB84 417 aaPredicted RBP12.39□□□□□ -0.43
SEMA6A-201ENST00000257414 CIZ1Q9ULV3 898 aaPredicted RBP12.39□□□□□ -0.43
SEMA6A-201ENST00000257414 NGDNQ8NEJ9 315 aaKnown RBP12.39□□□□□ -0.43
SEMA6A-201ENST00000257414 ATP10AO60312 1499 aa12.39□□□□□ -0.43
SEMA6A-201ENST00000257414 MYO5CQ9NQX4 1742 aa12.38□□□□□ -0.43
SEMA6A-201ENST00000257414 NASPP49321 788 aaPredicted RBP12.38□□□□□ -0.43
SEMA6A-201ENST00000257414 RABEP1Q15276 862 aa12.38□□□□□ -0.43
SEMA6A-201ENST00000257414 SYNMO15061 1565 aa12.38□□□□□ -0.43
SEMA6A-201ENST00000257414 KDM5AP29375 1690 aaKnown RBP12.37□□□□□ -0.43
SEMA6A-201ENST00000257414 NECTIN2Q92692 538 aa12.37□□□□□ -0.43
SEMA6A-201ENST00000257414 LTV1Q96GA3 475 aaPredicted RBP12.37□□□□□ -0.43
SEMA6A-201ENST00000257414 CD109Q6YHK3 1445 aa12.37□□□□□ -0.43
SEMA6A-201ENST00000257414 ISY1Q9ULR0 285 aaKnown RBP12.37□□□□□ -0.43
SEMA6A-201ENST00000257414 LMOD2Q6P5Q4 547 aa12.37□□□□□ -0.43
SEMA6A-201ENST00000257414 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.37□□□□□ -0.43
SEMA6A-201ENST00000257414 IL16Q14005 1332 aa12.36□□□□□ -0.43
SEMA6A-201ENST00000257414 ANO2Q9NQ90 1003 aa12.36□□□□□ -0.43
SEMA6A-201ENST00000257414 CAVIN1Q6NZI2 390 aaKnown RBP12.36□□□□□ -0.43
SEMA6A-201ENST00000257414 TSPYL4Q9UJ04 414 aa12.36□□□□□ -0.43
SEMA6A-201ENST00000257414 RRS1Q15050 365 aaKnown RBP12.36□□□□□ -0.43
SEMA6A-201ENST00000257414 PTPRTO14522 1441 aa12.36□□□□□ -0.43
SEMA6A-201ENST00000257414 FYB1O15117 783 aa12.35□□□□□ -0.43
SEMA6A-201ENST00000257414 FKBP5Q13451 457 aaPredicted RBP12.35□□□□□ -0.43
SEMA6A-201ENST00000257414 SULT6B1Q6IMI4 303 aa12.35□□□□□ -0.43
SEMA6A-201ENST00000257414 TNPO1Q92973 898 aaKnown RBP12.35□□□□□ -0.43
SEMA6A-201ENST00000257414 FBLN1P23142 703 aa12.35□□□□□ -0.43
SEMA6A-201ENST00000257414 WAPLQ7Z5K2 1190 aa12.35□□□□□ -0.43
SEMA6A-201ENST00000257414 TXNDC2Q86VQ3 553 aa12.35□□□□□ -0.43
SEMA6A-201ENST00000257414 BMP2KLQ5H9B9 411 aa12.34□□□□□ -0.43
SEMA6A-201ENST00000257414 EMILIN1Q9Y6C2 1016 aa12.34□□□□□ -0.43
SEMA6A-201ENST00000257414 ATP7AQ04656 1500 aa12.34□□□□□ -0.43
SEMA6A-201ENST00000257414 GOLGA6L4A6NEF3 574 aa12.34□□□□□ -0.43
SEMA6A-201ENST00000257414 NUCB1Q02818 461 aa12.34□□□□□ -0.43
SEMA6A-201ENST00000257414 ERVK-7P63135 1459 aa12.34□□□□□ -0.43
SEMA6A-201ENST00000257414 IQGAP3Q86VI3 1631 aa12.34□□□□□ -0.43
SEMA6A-201ENST00000257414 KIAA2012Q0VF49 1180 aa12.34□□□□□ -0.43
SEMA6A-201ENST00000257414 DCTN1Q14203 1278 aa12.34□□□□□ -0.43
SEMA6A-201ENST00000257414 ARID3AQ99856 593 aa12.34□□□□□ -0.43
SEMA6A-201ENST00000257414 ESPNB1AK53 854 aa12.34□□□□□ -0.43
SEMA6A-201ENST00000257414 CYB5RLQ6IPT4 315 aa12.34□□□□□ -0.43
SEMA6A-201ENST00000257414 IFT57Q9NWB7 429 aa12.33□□□□□ -0.44
SEMA6A-201ENST00000257414 XRCC6P12956 609 aaKnown RBP eCLIP12.33□□□□□ -0.44
SEMA6A-201ENST00000257414 SMC5Q8IY18 1101 aa12.33□□□□□ -0.44
SEMA6A-201ENST00000257414 TRPM2O94759 1503 aa12.33□□□□□ -0.44
SEMA6A-201ENST00000257414 TBC1D9Q6ZT07 1266 aa12.33□□□□□ -0.44
SEMA6A-201ENST00000257414 UNC13BO14795 1591 aa12.33□□□□□ -0.44
SEMA6A-201ENST00000257414 PRPF40AO75400 957 aaKnown RBP12.32□□□□□ -0.44
SEMA6A-201ENST00000257414 NEK4P51957 841 aa12.32□□□□□ -0.44
SEMA6A-201ENST00000257414 PANK2Q9BZ23 570 aa12.32□□□□□ -0.44
SEMA6A-201ENST00000257414 FGD1P98174 961 aa12.32□□□□□ -0.44
SEMA6A-201ENST00000257414 NME9Q86XW9 330 aa12.32□□□□□ -0.44
SEMA6A-201ENST00000257414 PHF14O94880 888 aa12.32□□□□□ -0.44
SEMA6A-201ENST00000257414 SLC4A2P04920 1241 aa12.32□□□□□ -0.44
SEMA6A-201ENST00000257414 ZBTB40Q9NUA8 1239 aa12.31□□□□□ -0.44
SEMA6A-201ENST00000257414 A0A1W2PP64 1363 aa12.31□□□□□ -0.44
SEMA6A-201ENST00000257414 SSFA2P28290 1259 aa12.31□□□□□ -0.44
SEMA6A-201ENST00000257414 PUS7Q96PZ0 661 aaKnown RBP12.31□□□□□ -0.44
SEMA6A-201ENST00000257414 CFAP65Q6ZU64 1925 aaKnown RBP12.31□□□□□ -0.44
SEMA6A-201ENST00000257414 ASXL2Q76L83 1435 aa12.31□□□□□ -0.44
SEMA6A-201ENST00000257414 PLXNC1O60486 1568 aa12.31□□□□□ -0.44
SEMA6A-201ENST00000257414 CCDC173Q0VFZ6 552 aa12.31□□□□□ -0.44
SEMA6A-201ENST00000257414 ZNF518AQ6AHZ1 1483 aa12.31□□□□□ -0.44
SEMA6A-201ENST00000257414 CDC42BPBQ9Y5S2 1711 aa12.3□□□□□ -0.44
SEMA6A-201ENST00000257414 FBXO31Q5XUX0 539 aaPredicted RBP12.3□□□□□ -0.44
SEMA6A-201ENST00000257414 FAM69CQ0P6D2 419 aa12.3□□□□□ -0.44
SEMA6A-201ENST00000257414 EID1Q9Y6B2 187 aa12.3□□□□□ -0.44
SEMA6A-201ENST00000257414 UGGT1Q9NYU2 1555 aa12.3□□□□□ -0.44
SEMA6A-201ENST00000257414 SBNO2Q9Y2G9 1366 aa12.3□□□□□ -0.44
SEMA6A-201ENST00000257414 RPAP2Q8IXW5 612 aaPredicted RBP12.3□□□□□ -0.44
SEMA6A-201ENST00000257414 MBIPQ9NS73 344 aa12.3□□□□□ -0.44
SEMA6A-201ENST00000257414 ERC2O15083 957 aa12.29□□□□□ -0.44
SEMA6A-201ENST00000257414 RNF214Q8ND24 703 aa12.29□□□□□ -0.44
SEMA6A-201ENST00000257414 ABCC1P33527 1531 aa12.29□□□□□ -0.44
SEMA6A-201ENST00000257414 SMARCA5O60264 1052 aaPredicted RBP12.29□□□□□ -0.44
SEMA6A-201ENST00000257414 TRIM35Q9UPQ4 493 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms