RNA–Protein interactions for RNA: ENST00000256996.8

DDB2-201, Transcript of damage specific DNA binding protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDB2, Length 1,870 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB2-201ENST00000256996 CDC42BPGQ6DT37 1551 aa16.49■□□□□ 0.23
DDB2-201ENST00000256996 C14orf37Q86TY3 774 aa16.49■□□□□ 0.23
DDB2-201ENST00000256996 ACEP12821 1306 aa16.48■□□□□ 0.23
DDB2-201ENST00000256996 EDC4Q6P2E9 1401 aaKnown RBP16.48■□□□□ 0.23
DDB2-201ENST00000256996 IQSEC2Q5JU85 1478 aa16.48■□□□□ 0.23
DDB2-201ENST00000256996 NALCNQ8IZF0 1738 aa16.47■□□□□ 0.23
DDB2-201ENST00000256996 C19orf44Q9H6X5 657 aa16.47■□□□□ 0.23
DDB2-201ENST00000256996 TOPAZ1Q8N9V7 1692 aa16.47■□□□□ 0.23
DDB2-201ENST00000256996 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.46■□□□□ 0.23
DDB2-201ENST00000256996 GGNBP2Q9H3C7 697 aa16.46■□□□□ 0.23
DDB2-201ENST00000256996 LTBP4Q8N2S1 1624 aa16.46■□□□□ 0.23
DDB2-201ENST00000256996 NCOA3Q9Y6Q9 1424 aa16.46■□□□□ 0.23
DDB2-201ENST00000256996 POLR3AO14802 1390 aaPredicted RBP16.46■□□□□ 0.23
DDB2-201ENST00000256996 TMEM94Q12767 1356 aa16.46■□□□□ 0.23
DDB2-201ENST00000256996 B4GALNT3Q6L9W6 998 aa16.46■□□□□ 0.22
DDB2-201ENST00000256996 PMFBP1Q8TBY8 1022 aa16.46■□□□□ 0.22
DDB2-201ENST00000256996 FMN2Q9NZ56 1722 aa16.44■□□□□ 0.22
DDB2-201ENST00000256996 SMG6Q86US8 1419 aaKnown RBP16.44■□□□□ 0.22
DDB2-201ENST00000256996 TNNT2P45379 298 aaPredicted RBP16.44■□□□□ 0.22
DDB2-201ENST00000256996 NGDNQ8NEJ9 315 aaKnown RBP16.44■□□□□ 0.22
DDB2-201ENST00000256996 USP6P35125 1406 aa16.43■□□□□ 0.22
DDB2-201ENST00000256996 STRCP1A6NGW2 1772 aa16.42■□□□□ 0.22
DDB2-201ENST00000256996 RNF123Q5XPI4 1314 aa16.42■□□□□ 0.22
DDB2-201ENST00000256996 ZNF335Q9H4Z2 1342 aaPredicted RBP16.42■□□□□ 0.22
DDB2-201ENST00000256996 SSH2Q76I76 1423 aa16.42■□□□□ 0.22
DDB2-201ENST00000256996 TTC21BQ7Z4L5 1316 aa16.41■□□□□ 0.22
DDB2-201ENST00000256996 ANP32AP39687 249 aaKnown RBP16.41■□□□□ 0.22
DDB2-201ENST00000256996 NME9Q86XW9 330 aa16.41■□□□□ 0.22
DDB2-201ENST00000256996 PHF8Q9UPP1 1060 aa16.41■□□□□ 0.22
DDB2-201ENST00000256996 ITSN1Q15811 1721 aa16.4■□□□□ 0.22
DDB2-201ENST00000256996 MON2Q7Z3U7 1717 aa16.4■□□□□ 0.22
DDB2-201ENST00000256996 DCCP43146 1447 aa16.4■□□□□ 0.22
DDB2-201ENST00000256996 ESCO1Q5FWF5 840 aa16.39■□□□□ 0.22
DDB2-201ENST00000256996 UBE2Q2Q8WVN8 375 aa16.39■□□□□ 0.22
DDB2-201ENST00000256996 USP35Q9P2H5 1018 aa16.39■□□□□ 0.22
DDB2-201ENST00000256996 AKAP12Q02952 1782 aa16.39■□□□□ 0.21
DDB2-201ENST00000256996 ATF3P18847 181 aa16.38■□□□□ 0.21
DDB2-201ENST00000256996 MTHFSP49914 203 aa16.38■□□□□ 0.21
DDB2-201ENST00000256996 UBAP1LF5GYI3 381 aa16.37■□□□□ 0.21
DDB2-201ENST00000256996 ZRANB1Q9UGI0 708 aa16.37■□□□□ 0.21
DDB2-201ENST00000256996 TTC21AQ8NDW8 1320 aa16.37■□□□□ 0.21
DDB2-201ENST00000256996 RGPD8O14715 1765 aaPredicted RBP16.37■□□□□ 0.21
DDB2-201ENST00000256996 LRRC7Q96NW7 1537 aa16.37■□□□□ 0.21
DDB2-201ENST00000256996 CADPS2Q86UW7 1296 aa16.37■□□□□ 0.21
DDB2-201ENST00000256996 COG3Q96JB2 828 aa16.37■□□□□ 0.21
DDB2-201ENST00000256996 ORAI2Q96SN7 254 aa16.37■□□□□ 0.21
DDB2-201ENST00000256996 ANO8Q9HCE9 1232 aaPredicted RBP16.37■□□□□ 0.21
DDB2-201ENST00000256996 NRKQ7Z2Y5 1582 aa16.36■□□□□ 0.21
DDB2-201ENST00000256996 C1orf167Q5SNV9 1468 aa16.36■□□□□ 0.21
DDB2-201ENST00000256996 MSH6P52701 1360 aa16.36■□□□□ 0.21
DDB2-201ENST00000256996 NUDCQ9Y266 331 aa16.35■□□□□ 0.21
DDB2-201ENST00000256996 INSRP06213 1382 aa16.34■□□□□ 0.21
DDB2-201ENST00000256996 IPO9Q96P70 1041 aaKnown RBP16.34■□□□□ 0.21
DDB2-201ENST00000256996 ADAMTS8Q9UP79 889 aa16.34■□□□□ 0.21
DDB2-201ENST00000256996 ANKRD26Q9UPS8 1709 aa16.34■□□□□ 0.21
DDB2-201ENST00000256996 KIF20BQ96Q89 1820 aa16.34■□□□□ 0.21
DDB2-201ENST00000256996 MST1RQ04912 1400 aa16.34■□□□□ 0.21
DDB2-201ENST00000256996 WDR43Q15061 677 aaKnown RBP eCLIP16.33■□□□□ 0.21
DDB2-201ENST00000256996 PSME1Q06323 249 aa16.33■□□□□ 0.2
DDB2-201ENST00000256996 CFAP53Q96M91 514 aa16.33■□□□□ 0.2
DDB2-201ENST00000256996 ZBTB47Q9UFB7 747 aaPredicted RBP16.33■□□□□ 0.2
DDB2-201ENST00000256996 AATKQ6ZMQ8 1374 aa16.32■□□□□ 0.2
DDB2-201ENST00000256996 OVOS2A0A0J9YW53 1432 aa16.32■□□□□ 0.2
DDB2-201ENST00000256996 OVOS2Q6IE36 1432 aa16.32■□□□□ 0.2
DDB2-201ENST00000256996 FOXO3O43524 673 aa16.32■□□□□ 0.2
DDB2-201ENST00000256996 FBLN1P23142 703 aa16.32■□□□□ 0.2
DDB2-201ENST00000256996 POLKQ9UBT6 870 aa16.32■□□□□ 0.2
DDB2-201ENST00000256996 MED1Q15648 1581 aaPredicted RBP16.32■□□□□ 0.2
DDB2-201ENST00000256996 USP31Q70CQ4 1352 aa16.31■□□□□ 0.2
DDB2-201ENST00000256996 PNPLA6Q8IY17 1366 aa16.3■□□□□ 0.2
DDB2-201ENST00000256996 PAK3O75914 559 aaPredicted RBP16.29■□□□□ 0.2
DDB2-201ENST00000256996 BLMP54132 1417 aaPredicted RBP16.29■□□□□ 0.2
DDB2-201ENST00000256996 ABTB2Q8N961 1025 aa16.29■□□□□ 0.2
DDB2-201ENST00000256996 NLRP6P59044 892 aa16.28■□□□□ 0.2
DDB2-201ENST00000256996 NBR1Q14596 966 aa16.28■□□□□ 0.2
DDB2-201ENST00000256996 XIRP1Q702N8 1843 aaKnown RBP16.28■□□□□ 0.2
DDB2-201ENST00000256996 EMILIN1Q9Y6C2 1016 aa16.27■□□□□ 0.2
DDB2-201ENST00000256996 PPM1GO15355 546 aaPredicted RBP16.26■□□□□ 0.19
DDB2-201ENST00000256996 RRS1Q15050 365 aaKnown RBP16.26■□□□□ 0.19
DDB2-201ENST00000256996 SLAIN2Q9P270 581 aa16.26■□□□□ 0.19
DDB2-201ENST00000256996 PIK3C2AO00443 1686 aa16.25■□□□□ 0.19
DDB2-201ENST00000256996 COL3A1P02461 1466 aaPredicted RBP16.25■□□□□ 0.19
DDB2-201ENST00000256996 XPCQ01831 940 aaPredicted RBP16.25■□□□□ 0.19
DDB2-201ENST00000256996 KRT28Q7Z3Y7 464 aa16.25■□□□□ 0.19
DDB2-201ENST00000256996 SALL2Q9Y467 1007 aaPredicted RBP16.25■□□□□ 0.19
DDB2-201ENST00000256996 KIF1AQ12756 1690 aa16.25■□□□□ 0.19
DDB2-201ENST00000256996 NUTM2GQ5VZR2 741 aa16.25■□□□□ 0.19
DDB2-201ENST00000256996 CCDC136Q96JN2 1154 aa16.25■□□□□ 0.19
DDB2-201ENST00000256996 DIAPH1O60610 1272 aaKnown RBP16.24■□□□□ 0.19
DDB2-201ENST00000256996 PHF23Q9BUL5 403 aaPredicted RBP16.24■□□□□ 0.19
DDB2-201ENST00000256996 SENP3-EIF4A1A0A087X0R7 540 aa16.23■□□□□ 0.19
DDB2-201ENST00000256996 BRINP3Q76B58 766 aa16.23■□□□□ 0.19
DDB2-201ENST00000256996 CDK12Q9NYV4 1490 aaPredicted RBP16.23■□□□□ 0.19
DDB2-201ENST00000256996 NPHP3Q7Z494 1330 aa16.23■□□□□ 0.19
DDB2-201ENST00000256996 HSPA1LP34931 641 aa16.22■□□□□ 0.19
DDB2-201ENST00000256996 SHPRHQ149N8 1683 aa16.22■□□□□ 0.19
DDB2-201ENST00000256996 SOX12O15370 315 aa16.22■□□□□ 0.19
DDB2-201ENST00000256996 U2AF1L5P0DN76 240 aaPredicted RBP16.22■□□□□ 0.19
DDB2-201ENST00000256996 U2AF1Q01081 240 aaKnown RBP eCLIP16.22■□□□□ 0.193e-6■■■■□ 20.8
DDB2-201ENST00000256996 DDX17Q92841 729 aaKnown RBP16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms