RNA–Protein interactions for RNA: ENST00000256552.10

TRPM1-201, Transcript of transient receptor potential cation channel subfamily M member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRPM1, Length 5,514 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM1-201ENST00000256552 WDR33Q9C0J8 1336 aaKnown RBP12.2□□□□□ -0.46
TRPM1-201ENST00000256552 CERS3Q8IU89 383 aa12.2□□□□□ -0.46
TRPM1-201ENST00000256552 PDILTQ8N807 584 aa12.2□□□□□ -0.46
TRPM1-201ENST00000256552 MVPQ14764 893 aaKnown RBP12.19□□□□□ -0.46
TRPM1-201ENST00000256552 KLHL40Q2TBA0 621 aa12.19□□□□□ -0.46
TRPM1-201ENST00000256552 GCC1Q96CN9 775 aa12.19□□□□□ -0.46
TRPM1-201ENST00000256552 SPAG9O60271 1321 aaKnown RBP12.19□□□□□ -0.46
TRPM1-201ENST00000256552 RASSF8Q8NHQ8 419 aa12.19□□□□□ -0.46
TRPM1-201ENST00000256552 C1orf115Q9H7X2 142 aa12.19□□□□□ -0.46
TRPM1-201ENST00000256552 TMCO3Q6UWJ1 677 aa12.19□□□□□ -0.46
TRPM1-201ENST00000256552 TCP11L2Q8N4U5 519 aa12.19□□□□□ -0.46
TRPM1-201ENST00000256552 ZSCAN23Q3MJ62 389 aa12.18□□□□□ -0.46
TRPM1-201ENST00000256552 CHD1LQ86WJ1 897 aa12.18□□□□□ -0.46
TRPM1-201ENST00000256552 ARAP1Q96P48 1450 aa12.18□□□□□ -0.46
TRPM1-201ENST00000256552 POLR3GO15318 223 aaPredicted RBP12.18□□□□□ -0.46
TRPM1-201ENST00000256552 SLFN5Q08AF3 891 aa12.18□□□□□ -0.46
TRPM1-201ENST00000256552 ANKRD20A12PQ8NF67 263 aa12.18□□□□□ -0.46
TRPM1-201ENST00000256552 FOSBP53539 338 aa12.18□□□□□ -0.46
TRPM1-201ENST00000256552 TNMDQ9H2S6 317 aa12.18□□□□□ -0.46
TRPM1-201ENST00000256552 RBM27Q9P2N5 1060 aaKnown RBP12.18□□□□□ -0.46
TRPM1-201ENST00000256552 BAG4O95429 457 aaKnown RBP12.17□□□□□ -0.46
TRPM1-201ENST00000256552 C16orf45Q96MC5 204 aaPredicted RBP12.17□□□□□ -0.46
TRPM1-201ENST00000256552 SDF4Q9BRK5 362 aa12.17□□□□□ -0.46
TRPM1-201ENST00000256552 ROCK1Q13464 1354 aa12.17□□□□□ -0.46
TRPM1-201ENST00000256552 A0A0G2JS52 829 aa12.17□□□□□ -0.46
TRPM1-201ENST00000256552 KIAA0754O94854 1291 aa12.17□□□□□ -0.46
TRPM1-201ENST00000256552 RBM25P49756 843 aaKnown RBP12.17□□□□□ -0.46
TRPM1-201ENST00000256552 UBXN4Q92575 508 aa12.17□□□□□ -0.46
TRPM1-201ENST00000256552 TERF2IPQ9NYB0 399 aa12.17□□□□□ -0.46
TRPM1-201ENST00000256552 MEX3CQ5U5Q3 659 aaKnown RBP12.17□□□□□ -0.46
TRPM1-201ENST00000256552 MYOM3Q5VTT5 1437 aa12.17□□□□□ -0.46
TRPM1-201ENST00000256552 PTPN14Q15678 1187 aa12.16□□□□□ -0.46
TRPM1-201ENST00000256552 CT47A1Q5JQC4 288 aaPredicted RBP12.16□□□□□ -0.46
TRPM1-201ENST00000256552 TOMM22Q9NS69 142 aa12.16□□□□□ -0.46
TRPM1-201ENST00000256552 NOB1Q9ULX3 412 aaKnown RBP12.16□□□□□ -0.46
TRPM1-201ENST00000256552 FMNL2Q96PY5 1086 aa12.16□□□□□ -0.46
TRPM1-201ENST00000256552 EIF3JO75822 258 aaKnown RBP12.16□□□□□ -0.46
TRPM1-201ENST00000256552 HNRNPMP52272 730 aaKnown RBP eCLIP12.16□□□□□ -0.46
TRPM1-201ENST00000256552 EXOSC9Q06265 439 aaKnown RBP12.16□□□□□ -0.46
TRPM1-201ENST00000256552 NOLC1Q14978 699 aaKnown RBP eCLIP12.16□□□□□ -0.46
TRPM1-201ENST00000256552 ZNF830Q96NB3 372 aaPredicted RBP12.16□□□□□ -0.46
TRPM1-201ENST00000256552 PAIP2Q9BPZ3 127 aaKnown RBP12.16□□□□□ -0.46
TRPM1-201ENST00000256552 GOLIM4O00461 696 aa12.16□□□□□ -0.46
TRPM1-201ENST00000256552 PRDM4Q9UKN5 801 aa12.16□□□□□ -0.46
TRPM1-201ENST00000256552 NOL7Q9UMY1 257 aaKnown RBP12.16□□□□□ -0.46
TRPM1-201ENST00000256552 ADCY5O95622 1261 aa12.15□□□□□ -0.46
TRPM1-201ENST00000256552 MYO6Q9UM54 1294 aa12.15□□□□□ -0.46
TRPM1-201ENST00000256552 NPM1P06748 294 aaKnown RBP eCLIP12.15□□□□□ -0.46
TRPM1-201ENST00000256552 TTLL5Q6EMB2 1281 aa12.15□□□□□ -0.46
TRPM1-201ENST00000256552 FILIP1Q7Z7B0 1213 aa12.15□□□□□ -0.46
TRPM1-201ENST00000256552 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.15□□□□□ -0.46
TRPM1-201ENST00000256552 IGHDP01880 384 aa12.15□□□□□ -0.46
TRPM1-201ENST00000256552 MYRIPQ8NFW9 859 aa12.15□□□□□ -0.46
TRPM1-201ENST00000256552 EFCC1Q9HA90 598 aa12.15□□□□□ -0.46
TRPM1-201ENST00000256552 FAM177A1Q8N128 213 aaPredicted RBP12.15□□□□□ -0.46
TRPM1-201ENST00000256552 TRAK1Q9UPV9 953 aa12.15□□□□□ -0.46
TRPM1-201ENST00000256552 ERC2O15083 957 aa12.15□□□□□ -0.47
TRPM1-201ENST00000256552 TTC31Q49AM3 519 aaPredicted RBP12.14□□□□□ -0.47
TRPM1-201ENST00000256552 CAGE1Q8TC20 777 aa12.14□□□□□ -0.47
TRPM1-201ENST00000256552 KINO60870 393 aaKnown RBP12.14□□□□□ -0.47
TRPM1-201ENST00000256552 ERLIN1O75477 346 aa12.14□□□□□ -0.47
TRPM1-201ENST00000256552 SARNPP82979 210 aaKnown RBP12.14□□□□□ -0.47
TRPM1-201ENST00000256552 CCDC183Q5T5S1 534 aa12.13□□□□□ -0.47
TRPM1-201ENST00000256552 FAM107BQ9H098 131 aa12.13□□□□□ -0.47
TRPM1-201ENST00000256552 BMS1Q14692 1282 aaKnown RBP12.13□□□□□ -0.47
TRPM1-201ENST00000256552 KIF18AQ8NI77 898 aa12.13□□□□□ -0.47
TRPM1-201ENST00000256552 NUP62CLQ9H1M0 184 aa12.13□□□□□ -0.47
TRPM1-201ENST00000256552 LRSAM1Q6UWE0 723 aa12.13□□□□□ -0.47
TRPM1-201ENST00000256552 ZNF526Q8TF50 670 aaPredicted RBP12.13□□□□□ -0.47
TRPM1-201ENST00000256552 TSR2Q969E8 191 aaKnown RBP12.13□□□□□ -0.47
TRPM1-201ENST00000256552 CCDC102AQ96A19 550 aa12.13□□□□□ -0.47
TRPM1-201ENST00000256552 A0A1B0GUL7 405 aa12.12□□□□□ -0.47
TRPM1-201ENST00000256552 HOOK1Q9UJC3 728 aaKnown RBP12.12□□□□□ -0.47
TRPM1-201ENST00000256552 OLFM4Q6UX06 510 aa12.12□□□□□ -0.47
TRPM1-201ENST00000256552 DHX8Q14562 1220 aaKnown RBP12.12□□□□□ -0.47
TRPM1-201ENST00000256552 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.12□□□□□ -0.47
TRPM1-201ENST00000256552 DNAAF4Q8WXU2 420 aa12.12□□□□□ -0.47
TRPM1-201ENST00000256552 FAM177BA6PVY3 158 aa12.11□□□□□ -0.47
TRPM1-201ENST00000256552 CT47B1P0C2W7 299 aaPredicted RBP12.11□□□□□ -0.47
TRPM1-201ENST00000256552 ATF7IPQ6VMQ6 1270 aa12.11□□□□□ -0.47
TRPM1-201ENST00000256552 KIF2AO00139 706 aaPredicted RBP12.11□□□□□ -0.47
TRPM1-201ENST00000256552 DIAPH1O60610 1272 aaKnown RBP12.11□□□□□ -0.47
TRPM1-201ENST00000256552 KRT85P78386 507 aa12.11□□□□□ -0.47
TRPM1-201ENST00000256552 RSPH14Q9UHP6 348 aa12.11□□□□□ -0.47
TRPM1-201ENST00000256552 CEBPZQ03701 1054 aaKnown RBP12.11□□□□□ -0.47
TRPM1-201ENST00000256552 NCOA1Q15788 1441 aa12.11□□□□□ -0.47
TRPM1-201ENST00000256552 PDCP20941 246 aa12.1□□□□□ -0.47
TRPM1-201ENST00000256552 MAP3K11Q16584 847 aa12.1□□□□□ -0.47
TRPM1-201ENST00000256552 C10orf67Q8IYJ2 551 aa12.1□□□□□ -0.47
TRPM1-201ENST00000256552 CCDC47Q96A33 483 aaKnown RBP12.1□□□□□ -0.47
TRPM1-201ENST00000256552 PCMTD1Q96MG8 357 aaPredicted RBP12.1□□□□□ -0.47
TRPM1-201ENST00000256552 HFM1A2PYH4 1435 aa12.1□□□□□ -0.47
TRPM1-201ENST00000256552 CAMK4Q16566 473 aa12.1□□□□□ -0.47
TRPM1-201ENST00000256552 CUX1P39880 1505 aa12.1□□□□□ -0.47
TRPM1-201ENST00000256552 LRPPRCP42704 1394 aaKnown RBP12.1□□□□□ -0.47
TRPM1-201ENST00000256552 MNAT1P51948 309 aa12.1□□□□□ -0.47
TRPM1-201ENST00000256552 DDX11Q96FC9 970 aa12.1□□□□□ -0.47
TRPM1-201ENST00000256552 UVSSAQ2YD98 709 aa12.09□□□□□ -0.47
TRPM1-201ENST00000256552 PRIM1P49642 420 aaKnown RBP12.09□□□□□ -0.47
TRPM1-201ENST00000256552 GNAI1P63096 354 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms