RNA–Protein interactions for RNA: ENST00000256151.7

CCDC59-201, Transcript of coiled-coil domain containing 59, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC59, Length 1,983 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC59-201ENST00000256151 FSD2A1L4K1 749 aa20.53■□□□□ 0.88
CCDC59-201ENST00000256151 HDAC1Q13547 482 aaPredicted RBP20.53■□□□□ 0.88
CCDC59-201ENST00000256151 SENP3Q9H4L4 574 aaPredicted RBP20.53■□□□□ 0.88
CCDC59-201ENST00000256151 RPGRIP1LQ68CZ1 1315 aa20.52■□□□□ 0.88
CCDC59-201ENST00000256151 STAG3Q9UJ98 1225 aa20.52■□□□□ 0.88
CCDC59-201ENST00000256151 CHMP5Q9NZZ3 219 aa20.52■□□□□ 0.87
CCDC59-201ENST00000256151 NEXMIFQ5QGS0 1516 aa20.52■□□□□ 0.87
CCDC59-201ENST00000256151 MCM4P33991 863 aa20.51■□□□□ 0.87
CCDC59-201ENST00000256151 DZIP1LQ8IYY4 767 aaKnown RBP20.5■□□□□ 0.87
CCDC59-201ENST00000256151 FER1L4A9Z1Z3 1794 aa20.5■□□□□ 0.87
CCDC59-201ENST00000256151 MTHFSP49914 203 aa20.5■□□□□ 0.87
CCDC59-201ENST00000256151 ISY1Q9ULR0 285 aaKnown RBP20.48■□□□□ 0.87
CCDC59-201ENST00000256151 RRP7AQ9Y3A4 280 aaKnown RBP20.48■□□□□ 0.87
CCDC59-201ENST00000256151 ANKRD36BQ8N2N9 1353 aa20.48■□□□□ 0.87
CCDC59-201ENST00000256151 TNRQ92752 1358 aa20.48■□□□□ 0.87
CCDC59-201ENST00000256151 GOLGA6L3A6NEY3 463 aa20.48■□□□□ 0.87
CCDC59-201ENST00000256151 C22orf23Q9BZE7 217 aa20.48■□□□□ 0.87
CCDC59-201ENST00000256151 SLC12A5Q9H2X9 1139 aa20.48■□□□□ 0.87
CCDC59-201ENST00000256151 IL16Q14005 1332 aa20.48■□□□□ 0.87
CCDC59-201ENST00000256151 NEUROD2Q15784 382 aa20.47■□□□□ 0.87
CCDC59-201ENST00000256151 UBE2Q2Q8WVN8 375 aa20.47■□□□□ 0.87
CCDC59-201ENST00000256151 VGFO15240 615 aaPredicted RBP20.46■□□□□ 0.87
CCDC59-201ENST00000256151 DDX19BQ9UMR2 479 aa20.46■□□□□ 0.87
CCDC59-201ENST00000256151 TNNQ9UQP3 1299 aa20.46■□□□□ 0.87
CCDC59-201ENST00000256151 ABCC11Q96J66 1382 aa20.46■□□□□ 0.87
CCDC59-201ENST00000256151 A2ML1A8K2U0 1454 aa20.46■□□□□ 0.87
CCDC59-201ENST00000256151 C3P01024 1663 aa20.46■□□□□ 0.87
CCDC59-201ENST00000256151 SMC5Q8IY18 1101 aa20.45■□□□□ 0.86
CCDC59-201ENST00000256151 FTSJ3Q8IY81 847 aaKnown RBP20.45■□□□□ 0.86
CCDC59-201ENST00000256151 NCOA3Q9Y6Q9 1424 aa20.44■□□□□ 0.86
CCDC59-201ENST00000256151 XRCC6P12956 609 aaKnown RBP eCLIP20.43■□□□□ 0.86
CCDC59-201ENST00000256151 SNX21Q969T3 373 aa20.43■□□□□ 0.86
CCDC59-201ENST00000256151 RRAGDQ9NQL2 400 aaPredicted RBP20.43■□□□□ 0.86
CCDC59-201ENST00000256151 EVC2Q86UK5 1308 aa20.43■□□□□ 0.86
CCDC59-201ENST00000256151 DDX11L8A8MPP1 907 aa20.42■□□□□ 0.86
CCDC59-201ENST00000256151 TMEM132EQ6IEE7 984 aa20.42■□□□□ 0.86
CCDC59-201ENST00000256151 TRAK1Q9UPV9 953 aa20.42■□□□□ 0.86
CCDC59-201ENST00000256151 BCL2L13Q9BXK5 485 aa20.41■□□□□ 0.86
CCDC59-201ENST00000256151 RBM25P49756 843 aaKnown RBP20.4■□□□□ 0.86
CCDC59-201ENST00000256151 MRE11P49959 708 aa20.4■□□□□ 0.86
CCDC59-201ENST00000256151 U2AF1L5P0DN76 240 aaPredicted RBP20.39■□□□□ 0.86
CCDC59-201ENST00000256151 U2AF1Q01081 240 aaKnown RBP eCLIP20.39■□□□□ 0.86
CCDC59-201ENST00000256151 HSCBQ8IWL3 235 aa20.39■□□□□ 0.86
CCDC59-201ENST00000256151 PLEKHF1Q96S99 279 aa20.39■□□□□ 0.86
CCDC59-201ENST00000256151 CIZ1Q9ULV3 898 aaPredicted RBP20.39■□□□□ 0.86
CCDC59-201ENST00000256151 TULP4Q9NRJ4 1543 aa20.39■□□□□ 0.85
CCDC59-201ENST00000256151 MED14O60244 1454 aa20.39■□□□□ 0.85
CCDC59-201ENST00000256151 ARHGEF28Q8N1W1 1705 aaKnown RBP20.39■□□□□ 0.85
CCDC59-201ENST00000256151 TRAK2O60296 914 aa20.39■□□□□ 0.85
CCDC59-201ENST00000256151 DDIT3P35638 169 aa20.39■□□□□ 0.85
CCDC59-201ENST00000256151 TNNT2P45379 298 aaPredicted RBP20.39■□□□□ 0.85
CCDC59-201ENST00000256151 ATF7IPQ6VMQ6 1270 aa20.39■□□□□ 0.85
CCDC59-201ENST00000256151 ZNF692Q9BU19 519 aaPredicted RBP20.39■□□□□ 0.85
CCDC59-201ENST00000256151 ZFYVE9O95405 1425 aa20.38■□□□□ 0.85
CCDC59-201ENST00000256151 RIMS1Q86UR5 1692 aaKnown RBP20.38■□□□□ 0.85
CCDC59-201ENST00000256151 PTMSP20962 102 aa20.38■□□□□ 0.85
CCDC59-201ENST00000256151 COL3A1P02461 1466 aaPredicted RBP20.38■□□□□ 0.85
CCDC59-201ENST00000256151 RIMS2Q9UQ26 1411 aa20.38■□□□□ 0.85
CCDC59-201ENST00000256151 TRIM27P14373 513 aa20.37■□□□□ 0.85
CCDC59-201ENST00000256151 CLCN1P35523 988 aa20.37■□□□□ 0.85
CCDC59-201ENST00000256151 SMC4Q9NTJ3 1288 aa20.37■□□□□ 0.85
CCDC59-201ENST00000256151 IPO8O15397 1037 aaKnown RBP20.37■□□□□ 0.85
CCDC59-201ENST00000256151 EIF5BO60841 1220 aaKnown RBP20.37■□□□□ 0.85
CCDC59-201ENST00000256151 TMPOP42166 694 aaKnown RBP20.36■□□□□ 0.85
CCDC59-201ENST00000256151 ANKRD26Q9UPS8 1709 aa20.36■□□□□ 0.85
CCDC59-201ENST00000256151 KIF16BQ96L93 1317 aa20.36■□□□□ 0.85
CCDC59-201ENST00000256151 MFAP1P55081 439 aaKnown RBP20.35■□□□□ 0.85
CCDC59-201ENST00000256151 EXOSC9Q06265 439 aaKnown RBP20.35■□□□□ 0.85
CCDC59-201ENST00000256151 PNNQ9H307 717 aaKnown RBP20.35■□□□□ 0.85
CCDC59-201ENST00000256151 ZBTB40Q9NUA8 1239 aa20.35■□□□□ 0.85
CCDC59-201ENST00000256151 UBR1Q8IWV7 1749 aa20.35■□□□□ 0.85
CCDC59-201ENST00000256151 BRPF1P55201 1214 aaPredicted RBP20.35■□□□□ 0.85
CCDC59-201ENST00000256151 ALDH1L2Q3SY69 923 aa20.35■□□□□ 0.85
CCDC59-201ENST00000256151 SSH1Q8WYL5 1049 aa20.35■□□□□ 0.85
CCDC59-201ENST00000256151 ZNF428Q96B54 188 aa20.35■□□□□ 0.85
CCDC59-201ENST00000256151 TRIM35Q9UPQ4 493 aa20.34■□□□□ 0.85
CCDC59-201ENST00000256151 ADAMTSL3P82987 1691 aa20.34■□□□□ 0.85
CCDC59-201ENST00000256151 NUCB1Q02818 461 aa20.34■□□□□ 0.85
CCDC59-201ENST00000256151 CHMP4BQ9H444 224 aaKnown RBP20.33■□□□□ 0.84
CCDC59-201ENST00000256151 ITPRIPQ8IWB1 547 aa20.32■□□□□ 0.84
CCDC59-201ENST00000256151 SKOR2Q2VWA4 1001 aaPredicted RBP20.31■□□□□ 0.84
CCDC59-201ENST00000256151 TMEM2Q9UHN6 1383 aa20.31■□□□□ 0.84
CCDC59-201ENST00000256151 NOB1Q9ULX3 412 aaKnown RBP20.3■□□□□ 0.84
CCDC59-201ENST00000256151 TSR2Q969E8 191 aaKnown RBP20.3■□□□□ 0.84
CCDC59-201ENST00000256151 STK26Q9P289 416 aa20.29■□□□□ 0.84
CCDC59-201ENST00000256151 CDC42BPGQ6DT37 1551 aa20.29■□□□□ 0.84
CCDC59-201ENST00000256151 ALKQ9UM73 1620 aa20.29■□□□□ 0.84
CCDC59-201ENST00000256151 PPIP5K1Q6PFW1 1433 aa20.29■□□□□ 0.84
CCDC59-201ENST00000256151 BMP2KLQ5H9B9 411 aa20.28■□□□□ 0.84
CCDC59-201ENST00000256151 TMEM57Q8N5G2 664 aa20.28■□□□□ 0.84
CCDC59-201ENST00000256151 GRPEL1Q9HAV7 217 aa20.28■□□□□ 0.84
CCDC59-201ENST00000256151 PNPLA6Q8IY17 1366 aa20.28■□□□□ 0.84
CCDC59-201ENST00000256151 GBP4Q96PP9 640 aa20.28■□□□□ 0.84
CCDC59-201ENST00000256151 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.27■□□□□ 0.84
CCDC59-201ENST00000256151 AEBP2Q6ZN18 517 aaPredicted RBP20.26■□□□□ 0.83
CCDC59-201ENST00000256151 SPRYD3Q8NCJ5 442 aa20.26■□□□□ 0.83
CCDC59-201ENST00000256151 ATAD2Q6PL18 1390 aa20.26■□□□□ 0.83
CCDC59-201ENST00000256151 LTKP29376 864 aa20.26■□□□□ 0.83
CCDC59-201ENST00000256151 RAB3GAP1Q15042 981 aa20.26■□□□□ 0.83
CCDC59-201ENST00000256151 CHD1LQ86WJ1 897 aa20.26■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms