RNA–Protein interactions for RNA: ENST00000254066.9

RARA-201, Transcript of retinoic acid receptor alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RARA, Length 2,414 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RARA-201ENST00000254066 REREQ9P2R6 1566 aa25.53■■□□□ 1.68
RARA-201ENST00000254066 DUOX2Q9NRD8 1548 aa25.52■■□□□ 1.68
RARA-201ENST00000254066 HNRNPMP52272 730 aaKnown RBP eCLIP25.52■■□□□ 1.68
RARA-201ENST00000254066 CCDC27Q2M243 656 aa25.52■■□□□ 1.68
RARA-201ENST00000254066 IQSEC2Q5JU85 1478 aa25.52■■□□□ 1.68
RARA-201ENST00000254066 KLHL40Q2TBA0 621 aa25.52■■□□□ 1.68
RARA-201ENST00000254066 HSP90AB1P08238 724 aaKnown RBP25.51■■□□□ 1.67
RARA-201ENST00000254066 CT47B1P0C2W7 299 aaPredicted RBP25.51■■□□□ 1.67
RARA-201ENST00000254066 RUNDC1Q96C34 613 aa25.5■■□□□ 1.67
RARA-201ENST00000254066 TRAPPC8Q9Y2L5 1435 aa25.5■■□□□ 1.67
RARA-201ENST00000254066 NOL7Q9UMY1 257 aaKnown RBP25.49■■□□□ 1.67
RARA-201ENST00000254066 SIGLEC1Q9BZZ2 1709 aa25.49■■□□□ 1.67
RARA-201ENST00000254066 SAMD9LQ8IVG5 1584 aa25.49■■□□□ 1.67
RARA-201ENST00000254066 ZNF445P59923 1031 aa25.48■■□□□ 1.67
RARA-201ENST00000254066 RIMS1Q86UR5 1692 aaKnown RBP25.48■■□□□ 1.67
RARA-201ENST00000254066 CSPP1Q1MSJ5 1256 aa25.48■■□□□ 1.67
RARA-201ENST00000254066 DIP2CQ9Y2E4 1556 aa25.48■■□□□ 1.67
RARA-201ENST00000254066 CEP152O94986 1710 aa25.48■■□□□ 1.67
RARA-201ENST00000254066 DYNC1I1O14576 645 aa25.47■■□□□ 1.67
RARA-201ENST00000254066 MCM5P33992 734 aa25.47■■□□□ 1.67
RARA-201ENST00000254066 ZKSCAN2Q63HK3 967 aa25.47■■□□□ 1.67
RARA-201ENST00000254066 SHPRHQ149N8 1683 aa25.47■■□□□ 1.67
RARA-201ENST00000254066 SPHKAPQ2M3C7 1700 aa25.46■■□□□ 1.67
RARA-201ENST00000254066 DZIP1LQ8IYY4 767 aaKnown RBP25.45■■□□□ 1.67
RARA-201ENST00000254066 KIAA1210Q9ULL0 1709 aa25.45■■□□□ 1.66
RARA-201ENST00000254066 TNNQ9UQP3 1299 aa25.44■■□□□ 1.66
RARA-201ENST00000254066 PDLIM2Q96JY6 352 aa25.44■■□□□ 1.66
RARA-201ENST00000254066 ABCA6Q8N139 1617 aa25.43■■□□□ 1.66
RARA-201ENST00000254066 FER1L4A9Z1Z3 1794 aa25.43■■□□□ 1.66
RARA-201ENST00000254066 AGLP35573 1532 aa25.43■■□□□ 1.66
RARA-201ENST00000254066 SYCP2Q9BX26 1530 aa25.43■■□□□ 1.66
RARA-201ENST00000254066 DDX19BQ9UMR2 479 aa25.42■■□□□ 1.66
RARA-201ENST00000254066 R3HCC1Q9Y3T6 440 aaKnown RBP25.42■■□□□ 1.66
RARA-201ENST00000254066 KIF16BQ96L93 1317 aa25.41■■□□□ 1.66
RARA-201ENST00000254066 K7ELQ4 463 aaPredicted RBP25.41■■□□□ 1.66
RARA-201ENST00000254066 FTSJ3Q8IY81 847 aaKnown RBP25.41■■□□□ 1.66
RARA-201ENST00000254066 FAM13BQ9NYF5 915 aa25.41■■□□□ 1.66
RARA-201ENST00000254066 KIDINS220Q9ULH0 1771 aa25.41■■□□□ 1.66
RARA-201ENST00000254066 MLECQ14165 292 aa25.39■■□□□ 1.66
RARA-201ENST00000254066 DDX49Q9Y6V7 483 aaKnown RBP25.39■■□□□ 1.66
RARA-201ENST00000254066 TCP11L2Q8N4U5 519 aa25.39■■□□□ 1.66
RARA-201ENST00000254066 UQCRHLA0A096LP55 91 aa25.38■■□□□ 1.65
RARA-201ENST00000254066 UQCRHP07919 91 aa25.38■■□□□ 1.65
RARA-201ENST00000254066 SPAG9O60271 1321 aaKnown RBP25.38■■□□□ 1.65
RARA-201ENST00000254066 UTP14CQ5TAP6 766 aaKnown RBP25.38■■□□□ 1.65
RARA-201ENST00000254066 KIF2CQ99661 725 aa25.36■■□□□ 1.65
RARA-201ENST00000254066 BAG4O95429 457 aaKnown RBP25.35■■□□□ 1.65
RARA-201ENST00000254066 BMP2KLQ5H9B9 411 aa25.35■■□□□ 1.65
RARA-201ENST00000254066 ZKSCAN5Q9Y2L8 839 aa25.35■■□□□ 1.65
RARA-201ENST00000254066 NUCB1Q02818 461 aa25.34■■□□□ 1.65
RARA-201ENST00000254066 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.34■■□□□ 1.659e-7■□□□□ 9.1
RARA-201ENST00000254066 BCL2L13Q9BXK5 485 aa25.34■■□□□ 1.65
RARA-201ENST00000254066 ERVK-7P63135 1459 aa25.34■■□□□ 1.65
RARA-201ENST00000254066 SASS6Q6UVJ0 657 aa25.34■■□□□ 1.65
RARA-201ENST00000254066 CARD14Q9BXL6 1004 aa25.34■■□□□ 1.65
RARA-201ENST00000254066 EIF2AK3Q9NZJ5 1116 aaKnown RBP25.33■■□□□ 1.65
RARA-201ENST00000254066 NAP1L2Q9ULW6 460 aaPredicted RBP25.33■■□□□ 1.65
RARA-201ENST00000254066 ATP7AQ04656 1500 aa25.33■■□□□ 1.65
RARA-201ENST00000254066 INO80Q9ULG1 1556 aaPredicted RBP25.32■■□□□ 1.64
RARA-201ENST00000254066 SSFA2P28290 1259 aa25.32■■□□□ 1.64
RARA-201ENST00000254066 TRPM2O94759 1503 aa25.32■■□□□ 1.64
RARA-201ENST00000254066 NUCB2P80303 420 aa25.31■■□□□ 1.64
RARA-201ENST00000254066 LMTK3Q96Q04 1460 aa25.31■■□□□ 1.64
RARA-201ENST00000254066 NEURL4Q96JN8 1562 aa25.3■■□□□ 1.64
RARA-201ENST00000254066 NEUROD2Q15784 382 aa25.29■■□□□ 1.64
RARA-201ENST00000254066 CCDC39Q9UFE4 941 aa25.29■■□□□ 1.64
RARA-201ENST00000254066 ZSCAN23Q3MJ62 389 aa25.28■■□□□ 1.64
RARA-201ENST00000254066 SBNO2Q9Y2G9 1366 aa25.28■■□□□ 1.64
RARA-201ENST00000254066 CCDC94Q9BW85 323 aaPredicted RBP25.27■■□□□ 1.64
RARA-201ENST00000254066 RRP7AQ9Y3A4 280 aaKnown RBP25.27■■□□□ 1.64
RARA-201ENST00000254066 ADGRB2O60241 1585 aa25.27■■□□□ 1.64
RARA-201ENST00000254066 TRIM27P14373 513 aa25.27■■□□□ 1.64
RARA-201ENST00000254066 ATF7IPQ6VMQ6 1270 aa25.27■■□□□ 1.64
RARA-201ENST00000254066 ESF1Q9H501 851 aaKnown RBP25.27■■□□□ 1.64
RARA-201ENST00000254066 ZBTB40Q9NUA8 1239 aa25.27■■□□□ 1.64
RARA-201ENST00000254066 XPCQ01831 940 aaPredicted RBP25.26■■□□□ 1.63
RARA-201ENST00000254066 DMTNQ08495 405 aa25.26■■□□□ 1.63
RARA-201ENST00000254066 BRD2P25440 801 aaKnown RBP25.25■■□□□ 1.63
RARA-201ENST00000254066 CHD1LQ86WJ1 897 aa25.25■■□□□ 1.63
RARA-201ENST00000254066 GAS2L2Q8NHY3 880 aa25.25■■□□□ 1.63
RARA-201ENST00000254066 PAXIP1Q6ZW49 1069 aaPredicted RBP25.25■■□□□ 1.63
RARA-201ENST00000254066 CFAP44Q96MT7 982 aa25.25■■□□□ 1.63
RARA-201ENST00000254066 MYO3AQ8NEV4 1616 aa25.25■■□□□ 1.63
RARA-201ENST00000254066 USP32Q8NFA0 1604 aa25.25■■□□□ 1.63
RARA-201ENST00000254066 NCLP19338 710 aaKnown RBP25.24■■□□□ 1.63
RARA-201ENST00000254066 ITPRIPQ8IWB1 547 aa25.24■■□□□ 1.63
RARA-201ENST00000254066 RBSNQ9H1K0 784 aa25.24■■□□□ 1.63
RARA-201ENST00000254066 CD2BP2O95400 341 aaKnown RBP25.24■■□□□ 1.63
RARA-201ENST00000254066 SMC4Q9NTJ3 1288 aa25.24■■□□□ 1.63
RARA-201ENST00000254066 LMBRD1Q9NUN5 540 aa25.24■■□□□ 1.63
RARA-201ENST00000254066 PTPRTO14522 1441 aa25.23■■□□□ 1.63
RARA-201ENST00000254066 CYP2E1P05181 493 aaPredicted RBP25.23■■□□□ 1.63
RARA-201ENST00000254066 MORC1Q86VD1 984 aa25.23■■□□□ 1.63
RARA-201ENST00000254066 CFAP53Q96M91 514 aa25.23■■□□□ 1.63
RARA-201ENST00000254066 CAVIN1Q6NZI2 390 aaKnown RBP25.21■■□□□ 1.63
RARA-201ENST00000254066 PLPPR3Q6T4P5 718 aa25.21■■□□□ 1.63
RARA-201ENST00000254066 BBXQ8WY36 941 aaPredicted RBP25.21■■□□□ 1.63
RARA-201ENST00000254066 CWC22Q9HCG8 908 aaKnown RBP25.21■■□□□ 1.63
RARA-201ENST00000254066 PREX1Q8TCU6 1659 aa25.2■■□□□ 1.62
RARA-201ENST00000254066 ABCC11Q96J66 1382 aa25.2■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms