RNA–Protein interactions for RNA: ENST00000252440.11

ECSIT-201, Transcript of ECSIT signalling integrator, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ECSIT, Length 1,501 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECSIT-201ENST00000252440 GGNBP2Q9H3C7 697 aa20.15■□□□□ 0.82
ECSIT-201ENST00000252440 NRKQ7Z2Y5 1582 aa20.14■□□□□ 0.81
ECSIT-201ENST00000252440 MSH6P52701 1360 aa20.14■□□□□ 0.81
ECSIT-201ENST00000252440 BLMP54132 1417 aaPredicted RBP20.14■□□□□ 0.81
ECSIT-201ENST00000252440 ACEP12821 1306 aa20.14■□□□□ 0.81
ECSIT-201ENST00000252440 RGPD8O14715 1765 aaPredicted RBP20.14■□□□□ 0.81
ECSIT-201ENST00000252440 WDR43Q15061 677 aaKnown RBP eCLIP20.12■□□□□ 0.81
ECSIT-201ENST00000252440 NUTM2FA1L443 756 aa20.12■□□□□ 0.81
ECSIT-201ENST00000252440 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.12■□□□□ 0.81
ECSIT-201ENST00000252440 USP6P35125 1406 aa20.12■□□□□ 0.81
ECSIT-201ENST00000252440 TNNT2P45379 298 aaPredicted RBP20.11■□□□□ 0.81
ECSIT-201ENST00000252440 SSH2Q76I76 1423 aa20.09■□□□□ 0.81
ECSIT-201ENST00000252440 MTHFSP49914 203 aa20.09■□□□□ 0.81
ECSIT-201ENST00000252440 CFAP53Q96M91 514 aa20.09■□□□□ 0.81
ECSIT-201ENST00000252440 C14orf37Q86TY3 774 aa20.08■□□□□ 0.81
ECSIT-201ENST00000252440 C19orf44Q9H6X5 657 aa20.08■□□□□ 0.81
ECSIT-201ENST00000252440 ADAMTS8Q9UP79 889 aa20.08■□□□□ 0.81
ECSIT-201ENST00000252440 TTC21BQ7Z4L5 1316 aa20.08■□□□□ 0.81
ECSIT-201ENST00000252440 HSPA1LP34931 641 aa20.07■□□□□ 0.8
ECSIT-201ENST00000252440 SHPRHQ149N8 1683 aa20.07■□□□□ 0.8
ECSIT-201ENST00000252440 NME9Q86XW9 330 aa20.07■□□□□ 0.8
ECSIT-201ENST00000252440 TTC21AQ8NDW8 1320 aa20.06■□□□□ 0.8
ECSIT-201ENST00000252440 NGDNQ8NEJ9 315 aaKnown RBP20.06■□□□□ 0.8
ECSIT-201ENST00000252440 PMFBP1Q8TBY8 1022 aa20.05■□□□□ 0.8
ECSIT-201ENST00000252440 COG3Q96JB2 828 aa20.05■□□□□ 0.8
ECSIT-201ENST00000252440 AATKQ6ZMQ8 1374 aa20.05■□□□□ 0.8
ECSIT-201ENST00000252440 DCCP43146 1447 aa20.05■□□□□ 0.8
ECSIT-201ENST00000252440 CADPS2Q86UW7 1296 aa20.04■□□□□ 0.8
ECSIT-201ENST00000252440 ROBO1Q9Y6N7 1651 aa20.03■□□□□ 0.8
ECSIT-201ENST00000252440 SLAIN2Q9P270 581 aa20.03■□□□□ 0.8
ECSIT-201ENST00000252440 PNPLA6Q8IY17 1366 aa20.03■□□□□ 0.8
ECSIT-201ENST00000252440 ATF3P18847 181 aa20.02■□□□□ 0.8
ECSIT-201ENST00000252440 PHF8Q9UPP1 1060 aa20.02■□□□□ 0.8
ECSIT-201ENST00000252440 OVOS2A0A0J9YW53 1432 aa20.02■□□□□ 0.8
ECSIT-201ENST00000252440 OVOS2Q6IE36 1432 aa20.02■□□□□ 0.8
ECSIT-201ENST00000252440 COL3A1P02461 1466 aaPredicted RBP20.01■□□□□ 0.79
ECSIT-201ENST00000252440 SMG6Q86US8 1419 aaKnown RBP20.01■□□□□ 0.79
ECSIT-201ENST00000252440 MAP2P11137 1827 aaKnown RBP20.01■□□□□ 0.79
ECSIT-201ENST00000252440 USP31Q70CQ4 1352 aa19.99■□□□□ 0.79
ECSIT-201ENST00000252440 POLKQ9UBT6 870 aa19.99■□□□□ 0.79
ECSIT-201ENST00000252440 ZRANB1Q9UGI0 708 aa19.99■□□□□ 0.79
ECSIT-201ENST00000252440 USP54Q70EL1 1684 aa19.98■□□□□ 0.79
ECSIT-201ENST00000252440 GTF3C3Q9Y5Q9 886 aa19.97■□□□□ 0.79
ECSIT-201ENST00000252440 PDE3BQ13370 1112 aa19.97■□□□□ 0.79
ECSIT-201ENST00000252440 ESCO1Q5FWF5 840 aa19.97■□□□□ 0.79
ECSIT-201ENST00000252440 NUDCQ9Y266 331 aa19.97■□□□□ 0.79
ECSIT-201ENST00000252440 CDK12Q9NYV4 1490 aaPredicted RBP19.96■□□□□ 0.79
ECSIT-201ENST00000252440 PIK3C2AO00443 1686 aa19.96■□□□□ 0.79
ECSIT-201ENST00000252440 KIF1AQ12756 1690 aa19.96■□□□□ 0.79
ECSIT-201ENST00000252440 NGEFQ8N5V2 710 aa19.96■□□□□ 0.79
ECSIT-201ENST00000252440 C1orf167Q5SNV9 1468 aa19.95■□□□□ 0.78
ECSIT-201ENST00000252440 MST1RQ04912 1400 aa19.95■□□□□ 0.78
ECSIT-201ENST00000252440 DIAPH1O60610 1272 aaKnown RBP19.93■□□□□ 0.78
ECSIT-201ENST00000252440 PHLPP1O60346 1717 aa19.91■□□□□ 0.78
ECSIT-201ENST00000252440 FBLN1P23142 703 aa19.91■□□□□ 0.78
ECSIT-201ENST00000252440 CCDC146Q8IYE0 955 aa19.91■□□□□ 0.78
ECSIT-201ENST00000252440 RUNDC1Q96C34 613 aa19.91■□□□□ 0.78
ECSIT-201ENST00000252440 ORAI2Q96SN7 254 aa19.91■□□□□ 0.78
ECSIT-201ENST00000252440 EMILIN1Q9Y6C2 1016 aa19.91■□□□□ 0.78
ECSIT-201ENST00000252440 AHDC1Q5TGY3 1603 aaPredicted RBP19.9■□□□□ 0.78
ECSIT-201ENST00000252440 U2AF1L5P0DN76 240 aaPredicted RBP19.9■□□□□ 0.78
ECSIT-201ENST00000252440 U2AF1Q01081 240 aaKnown RBP eCLIP19.9■□□□□ 0.78
ECSIT-201ENST00000252440 PSME1Q06323 249 aa19.9■□□□□ 0.78
ECSIT-201ENST00000252440 BRINP3Q76B58 766 aa19.9■□□□□ 0.78
ECSIT-201ENST00000252440 MARF1Q9Y4F3 1742 aaKnown RBP19.89■□□□□ 0.77
ECSIT-201ENST00000252440 SENP3-EIF4A1A0A087X0R7 540 aa19.89■□□□□ 0.77
ECSIT-201ENST00000252440 APAF1O14727 1248 aa19.88■□□□□ 0.77
ECSIT-201ENST00000252440 PPM1GO15355 546 aaPredicted RBP19.88■□□□□ 0.77
ECSIT-201ENST00000252440 NCBP3Q53F19 620 aaKnown RBP19.88■□□□□ 0.77
ECSIT-201ENST00000252440 SALL2Q9Y467 1007 aaPredicted RBP19.88■□□□□ 0.77
ECSIT-201ENST00000252440 ZNF521Q96K83 1311 aa19.88■□□□□ 0.77
ECSIT-201ENST00000252440 NLRP6P59044 892 aa19.87■□□□□ 0.77
ECSIT-201ENST00000252440 RRS1Q15050 365 aaKnown RBP19.87■□□□□ 0.77
ECSIT-201ENST00000252440 ABTB2Q8N961 1025 aa19.87■□□□□ 0.77
ECSIT-201ENST00000252440 COL16A1Q07092 1604 aaPredicted RBP19.87■□□□□ 0.77
ECSIT-201ENST00000252440 U2SURPO15042 1029 aaKnown RBP19.86■□□□□ 0.77
ECSIT-201ENST00000252440 PAK3O75914 559 aaPredicted RBP19.86■□□□□ 0.77
ECSIT-201ENST00000252440 PNNQ9H307 717 aaKnown RBP19.86■□□□□ 0.77
ECSIT-201ENST00000252440 MED1Q15648 1581 aaPredicted RBP19.86■□□□□ 0.77
ECSIT-201ENST00000252440 NHSL1Q5SYE7 1610 aa19.85■□□□□ 0.77
ECSIT-201ENST00000252440 TRPM3Q9HCF6 1732 aaPredicted RBP19.85■□□□□ 0.77
ECSIT-201ENST00000252440 FOXO3O43524 673 aa19.85■□□□□ 0.77
ECSIT-201ENST00000252440 IL13P35225 146 aa19.85■□□□□ 0.77
ECSIT-201ENST00000252440 KIF24Q5T7B8 1368 aa19.84■□□□□ 0.77
ECSIT-201ENST00000252440 PEAK1Q9H792 1746 aa19.84■□□□□ 0.77
ECSIT-201ENST00000252440 FCHSD2O94868 740 aa19.83■□□□□ 0.77
ECSIT-201ENST00000252440 PLEKHF1Q96S99 279 aa19.83■□□□□ 0.77
ECSIT-201ENST00000252440 SBNO1A3KN83 1393 aa19.83■□□□□ 0.77
ECSIT-201ENST00000252440 TCP11L2Q8N4U5 519 aa19.82■□□□□ 0.76
ECSIT-201ENST00000252440 MAP3K19Q56UN5 1328 aa19.82■□□□□ 0.76
ECSIT-201ENST00000252440 FLT4P35916 1363 aa19.81■□□□□ 0.76
ECSIT-201ENST00000252440 JCADQ9P266 1359 aa19.81■□□□□ 0.76
ECSIT-201ENST00000252440 GOLGA2Q08379 1002 aa19.81■□□□□ 0.76
ECSIT-201ENST00000252440 CCDC27Q2M243 656 aa19.81■□□□□ 0.76
ECSIT-201ENST00000252440 KRT28Q7Z3Y7 464 aa19.81■□□□□ 0.76
ECSIT-201ENST00000252440 PHF23Q9BUL5 403 aaPredicted RBP19.8■□□□□ 0.76
ECSIT-201ENST00000252440 SUPT16HQ9Y5B9 1047 aaKnown RBP19.8■□□□□ 0.76
ECSIT-201ENST00000252440 NUTM2GQ5VZR2 741 aa19.79■□□□□ 0.76
ECSIT-201ENST00000252440 CDCA7LQ96GN5 454 aa19.79■□□□□ 0.76
ECSIT-201ENST00000252440 NPHP3Q7Z494 1330 aa19.78■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms