RNA–Protein interactions for RNA: ENST00000252108.7

UBE4A-201, Transcript of ubiquitination factor E4A, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE4A, Length 6,103 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4A-201ENST00000252108 KDM3BQ7LBC6 1761 aa5.42□□□□□ -1.54
UBE4A-201ENST00000252108 AATKQ6ZMQ8 1374 aa5.42□□□□□ -1.54
UBE4A-201ENST00000252108 EXOC6Q8TAG9 804 aa5.42□□□□□ -1.54
UBE4A-201ENST00000252108 RGS12O14924 1447 aa5.42□□□□□ -1.54
UBE4A-201ENST00000252108 CDCA8Q53HL2 280 aa5.41□□□□□ -1.54
UBE4A-201ENST00000252108 MST1RQ04912 1400 aa5.41□□□□□ -1.54
UBE4A-201ENST00000252108 PTCH1Q13635 1447 aa5.41□□□□□ -1.54
UBE4A-201ENST00000252108 BACH2Q9BYV9 841 aa5.41□□□□□ -1.54
UBE4A-201ENST00000252108 SLC52A1Q9NWF4 448 aa5.41□□□□□ -1.54
UBE4A-201ENST00000252108 RAPGEF3O95398 923 aa5.41□□□□□ -1.54
UBE4A-201ENST00000252108 GLIPR1L2Q4G1C9 344 aa5.41□□□□□ -1.54
UBE4A-201ENST00000252108 BRPF1P55201 1214 aaPredicted RBP5.4□□□□□ -1.54
UBE4A-201ENST00000252108 C8orf34Q49A92 452 aa5.4□□□□□ -1.54
UBE4A-201ENST00000252108 GRWD1Q9BQ67 446 aaKnown RBP eCLIP5.4□□□□□ -1.544e-7■■■□□ 17.9
UBE4A-201ENST00000252108 EIF5BO60841 1220 aaKnown RBP5.4□□□□□ -1.54
UBE4A-201ENST00000252108 UPF2Q9HAU5 1272 aaKnown RBP5.4□□□□□ -1.54
UBE4A-201ENST00000252108 HAP1P54257 671 aaPredicted RBP5.4□□□□□ -1.55
UBE4A-201ENST00000252108 BECN1Q14457 450 aa5.4□□□□□ -1.55
UBE4A-201ENST00000252108 METP08581 1390 aa5.4□□□□□ -1.55
UBE4A-201ENST00000252108 USP31Q70CQ4 1352 aa5.4□□□□□ -1.55
UBE4A-201ENST00000252108 NBR1Q14596 966 aa5.39□□□□□ -1.55
UBE4A-201ENST00000252108 ZNF326Q5BKZ1 582 aaKnown RBP5.39□□□□□ -1.55
UBE4A-201ENST00000252108 RIMS2Q9UQ26 1411 aa5.39□□□□□ -1.55
UBE4A-201ENST00000252108 NFAT5O94916 1531 aa5.39□□□□□ -1.55
UBE4A-201ENST00000252108 WWC1Q8IX03 1113 aa5.39□□□□□ -1.55
UBE4A-201ENST00000252108 CACNA1FO60840 1977 aa5.39□□□□□ -1.55
UBE4A-201ENST00000252108 TRIM35Q9UPQ4 493 aa5.39□□□□□ -1.55
UBE4A-201ENST00000252108 EDC4Q6P2E9 1401 aaKnown RBP5.38□□□□□ -1.55
UBE4A-201ENST00000252108 LTN1O94822 1766 aa5.38□□□□□ -1.55
UBE4A-201ENST00000252108 STAG3Q9UJ98 1225 aa5.38□□□□□ -1.55
UBE4A-201ENST00000252108 NCOA3Q9Y6Q9 1424 aa5.38□□□□□ -1.55
UBE4A-201ENST00000252108 PAK3O75914 559 aaPredicted RBP5.38□□□□□ -1.55
UBE4A-201ENST00000252108 ATAD2Q6PL18 1390 aa5.38□□□□□ -1.55
UBE4A-201ENST00000252108 ALS2Q96Q42 1657 aa5.38□□□□□ -1.55
UBE4A-201ENST00000252108 CC2D1BQ5T0F9 858 aaKnown RBP5.38□□□□□ -1.55
UBE4A-201ENST00000252108 ABCC6O95255 1503 aa5.38□□□□□ -1.55
UBE4A-201ENST00000252108 COL18A1P39060 1754 aa5.38□□□□□ -1.55
UBE4A-201ENST00000252108 XIRP1Q702N8 1843 aaKnown RBP5.37□□□□□ -1.55
UBE4A-201ENST00000252108 SLC12A5Q9H2X9 1139 aa5.37□□□□□ -1.55
UBE4A-201ENST00000252108 STRCP1A6NGW2 1772 aa5.37□□□□□ -1.55
UBE4A-201ENST00000252108 WDR43Q15061 677 aaKnown RBP eCLIP5.37□□□□□ -1.55
UBE4A-201ENST00000252108 PLEKHG1Q9ULL1 1385 aa5.37□□□□□ -1.55
UBE4A-201ENST00000252108 ZNF853P0CG23 659 aa5.37□□□□□ -1.55
UBE4A-201ENST00000252108 NPM2Q86SE8 214 aaKnown RBP5.37□□□□□ -1.55
UBE4A-201ENST00000252108 WDR63Q8IWG1 891 aa5.37□□□□□ -1.55
UBE4A-201ENST00000252108 IL16Q14005 1332 aa5.37□□□□□ -1.55
UBE4A-201ENST00000252108 FYB1O15117 783 aa5.36□□□□□ -1.55
UBE4A-201ENST00000252108 NEFMP07197 916 aa5.36□□□□□ -1.55
UBE4A-201ENST00000252108 CRBNQ96SW2 442 aa5.36□□□□□ -1.55
UBE4A-201ENST00000252108 RGPD2P0DJD1 1756 aa5.36□□□□□ -1.55
UBE4A-201ENST00000252108 L1TD1Q5T7N2 865 aaKnown RBP5.36□□□□□ -1.55
UBE4A-201ENST00000252108 C14orf37Q86TY3 774 aa5.36□□□□□ -1.55
UBE4A-201ENST00000252108 TMEM2Q9UHN6 1383 aa5.36□□□□□ -1.55
UBE4A-201ENST00000252108 KRI1Q8N9T8 703 aaKnown RBP5.36□□□□□ -1.55
UBE4A-201ENST00000252108 PDE3AQ14432 1141 aa5.36□□□□□ -1.55
UBE4A-201ENST00000252108 SLIT3O75094 1523 aa5.36□□□□□ -1.55
UBE4A-201ENST00000252108 PRR36Q9H6K5 1346 aa5.35□□□□□ -1.55
UBE4A-201ENST00000252108 AAMPQ13685 434 aa5.35□□□□□ -1.55
UBE4A-201ENST00000252108 CEP170BQ9Y4F5 1589 aaPredicted RBP5.35□□□□□ -1.55
UBE4A-201ENST00000252108 KDRP35968 1356 aa5.35□□□□□ -1.55
UBE4A-201ENST00000252108 ROBO2Q9HCK4 1378 aa5.35□□□□□ -1.55
UBE4A-201ENST00000252108 RARSP54136 660 aaKnown RBP5.35□□□□□ -1.55
UBE4A-201ENST00000252108 GOLGA2Q08379 1002 aa5.35□□□□□ -1.55
UBE4A-201ENST00000252108 E9PSI1 815 aa5.35□□□□□ -1.55
UBE4A-201ENST00000252108 RLBP1P12271 317 aa5.35□□□□□ -1.55
UBE4A-201ENST00000252108 TMEM132EQ6IEE7 984 aa5.35□□□□□ -1.55
UBE4A-201ENST00000252108 PARP4Q9UKK3 1724 aaKnown RBP5.35□□□□□ -1.55
UBE4A-201ENST00000252108 VGFO15240 615 aaPredicted RBP5.35□□□□□ -1.55
UBE4A-201ENST00000252108 IGHDP01880 384 aa5.35□□□□□ -1.55
UBE4A-201ENST00000252108 KNSTRNQ9Y448 316 aa5.35□□□□□ -1.55
UBE4A-201ENST00000252108 SHANK3Q9BYB0 1731 aa5.34□□□□□ -1.55
UBE4A-201ENST00000252108 PLIN1O60240 522 aa5.34□□□□□ -1.55
UBE4A-201ENST00000252108 CANXP27824 592 aaKnown RBP5.34□□□□□ -1.55
UBE4A-201ENST00000252108 FBXO31Q5XUX0 539 aaPredicted RBP5.34□□□□□ -1.55
UBE4A-201ENST00000252108 PTMSP20962 102 aa5.34□□□□□ -1.55
UBE4A-201ENST00000252108 SKAP1Q86WV1 359 aa5.34□□□□□ -1.55
UBE4A-201ENST00000252108 CRB1P82279 1406 aa5.34□□□□□ -1.55
UBE4A-201ENST00000252108 PAPPAQ13219 1627 aa5.34□□□□□ -1.55
UBE4A-201ENST00000252108 DDIT3P35638 169 aa5.34□□□□□ -1.56
UBE4A-201ENST00000252108 CGNL1Q0VF96 1302 aa5.34□□□□□ -1.56
UBE4A-201ENST00000252108 ATP10DQ9P241 1426 aa5.34□□□□□ -1.56
UBE4A-201ENST00000252108 CENPQQ7L2Z9 268 aaPredicted RBP5.34□□□□□ -1.56
UBE4A-201ENST00000252108 PDE4AP27815 886 aa5.33□□□□□ -1.56
UBE4A-201ENST00000252108 RSPH6AQ9H0K4 717 aa5.33□□□□□ -1.56
UBE4A-201ENST00000252108 USP6P35125 1406 aa5.33□□□□□ -1.56
UBE4A-201ENST00000252108 APAF1O14727 1248 aa5.33□□□□□ -1.56
UBE4A-201ENST00000252108 EVC2Q86UK5 1308 aa5.33□□□□□ -1.56
UBE4A-201ENST00000252108 BCAR3O75815 825 aa5.33□□□□□ -1.56
UBE4A-201ENST00000252108 RUNDC1Q96C34 613 aa5.33□□□□□ -1.56
UBE4A-201ENST00000252108 PKD1L3Q7Z443 1732 aa5.33□□□□□ -1.56
UBE4A-201ENST00000252108 CT47B1P0C2W7 299 aaPredicted RBP5.33□□□□□ -1.56
UBE4A-201ENST00000252108 ABCA3Q99758 1704 aa5.32□□□□□ -1.56
UBE4A-201ENST00000252108 ANP32BQ92688 251 aaKnown RBP5.32□□□□□ -1.56
UBE4A-201ENST00000252108 TNNQ9UQP3 1299 aa5.32□□□□□ -1.56
UBE4A-201ENST00000252108 ANKARQ7Z5J8 1434 aa5.32□□□□□ -1.56
UBE4A-201ENST00000252108 DDX60Q8IY21 1712 aaKnown RBP5.32□□□□□ -1.56
UBE4A-201ENST00000252108 UBR2Q8IWV8 1755 aa5.32□□□□□ -1.56
UBE4A-201ENST00000252108 IL13P35225 146 aa5.32□□□□□ -1.56
UBE4A-201ENST00000252108 ANTXR1Q9H6X2 564 aa5.32□□□□□ -1.56
UBE4A-201ENST00000252108 CFAP44Q96MT7 982 aa5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms