RNA–Protein interactions for RNA: ENST00000248121.6

SYNGR3-201, Transcript of synaptogyrin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYNGR3, Length 2,051 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-201ENST00000248121 PLEKHG3A1L390 1219 aa31.09■■■□□ 2.57
SYNGR3-201ENST00000248121 ZRANB1Q9UGI0 708 aa31.09■■■□□ 2.57
SYNGR3-201ENST00000248121 ANKARQ7Z5J8 1434 aa31.08■■■□□ 2.57
SYNGR3-201ENST00000248121 POLR3AO14802 1390 aaPredicted RBP31.08■■■□□ 2.57
SYNGR3-201ENST00000248121 NME9Q86XW9 330 aa31.08■■■□□ 2.57
SYNGR3-201ENST00000248121 SHPRHQ149N8 1683 aa31.06■■■□□ 2.56
SYNGR3-201ENST00000248121 PROSER2Q86WR7 435 aaPredicted RBP31.06■■■□□ 2.56
SYNGR3-201ENST00000248121 USP6P35125 1406 aa31.06■■■□□ 2.56
SYNGR3-201ENST00000248121 PDE3BQ13370 1112 aa31.04■■■□□ 2.56
SYNGR3-201ENST00000248121 C14orf37Q86TY3 774 aa31.04■■■□□ 2.56
SYNGR3-201ENST00000248121 RNF123Q5XPI4 1314 aa31.03■■■□□ 2.56
SYNGR3-201ENST00000248121 FBLN1P23142 703 aa31.02■■■□□ 2.56
SYNGR3-201ENST00000248121 XIRP1Q702N8 1843 aaKnown RBP31.02■■■□□ 2.56
SYNGR3-201ENST00000248121 MTHFSP49914 203 aa31.01■■■□□ 2.56
SYNGR3-201ENST00000248121 CDCA7LQ96GN5 454 aa31.01■■■□□ 2.56
SYNGR3-201ENST00000248121 ZNF692Q9BU19 519 aaPredicted RBP31.01■■■□□ 2.55
SYNGR3-201ENST00000248121 SSH2Q76I76 1423 aa31■■■□□ 2.55
SYNGR3-201ENST00000248121 TMEM94Q12767 1356 aa30.99■■■□□ 2.55
SYNGR3-201ENST00000248121 MAP2P11137 1827 aaKnown RBP30.99■■■□□ 2.55
SYNGR3-201ENST00000248121 TTC21BQ7Z4L5 1316 aa30.98■■■□□ 2.55
SYNGR3-201ENST00000248121 ERICH6BQ5W0A0 696 aa30.96■■■□□ 2.55
SYNGR3-201ENST00000248121 NGDNQ8NEJ9 315 aaKnown RBP30.96■■■□□ 2.55
SYNGR3-201ENST00000248121 CCDC146Q8IYE0 955 aa30.95■■■□□ 2.55
SYNGR3-201ENST00000248121 PIK3C2AO00443 1686 aa30.94■■■□□ 2.54
SYNGR3-201ENST00000248121 ZNF521Q96K83 1311 aa30.94■■■□□ 2.54
SYNGR3-201ENST00000248121 ZNF335Q9H4Z2 1342 aaPredicted RBP30.93■■■□□ 2.54
SYNGR3-201ENST00000248121 COL3A1P02461 1466 aaPredicted RBP30.91■■■□□ 2.54
SYNGR3-201ENST00000248121 OVOS2A0A0J9YW53 1432 aa30.9■■■□□ 2.54
SYNGR3-201ENST00000248121 OVOS2Q6IE36 1432 aa30.9■■■□□ 2.54
SYNGR3-201ENST00000248121 MARF1Q9Y4F3 1742 aaKnown RBP30.9■■■□□ 2.54
SYNGR3-201ENST00000248121 PHF8Q9UPP1 1060 aa30.9■■■□□ 2.54
SYNGR3-201ENST00000248121 ORAI2Q96SN7 254 aa30.89■■■□□ 2.54
SYNGR3-201ENST00000248121 ESCO1Q5FWF5 840 aa30.89■■■□□ 2.54
SYNGR3-201ENST00000248121 COG3Q96JB2 828 aa30.88■■■□□ 2.53
SYNGR3-201ENST00000248121 C19orf44Q9H6X5 657 aa30.88■■■□□ 2.53
SYNGR3-201ENST00000248121 APAF1O14727 1248 aa30.87■■■□□ 2.53
SYNGR3-201ENST00000248121 POLKQ9UBT6 870 aa30.85■■■□□ 2.53
SYNGR3-201ENST00000248121 LRRC7Q96NW7 1537 aa30.85■■■□□ 2.53
SYNGR3-201ENST00000248121 C1orf167Q5SNV9 1468 aa30.85■■■□□ 2.53
SYNGR3-201ENST00000248121 RCAN3Q9UKA8 241 aa30.84■■■□□ 2.53
SYNGR3-201ENST00000248121 EMILIN1Q9Y6C2 1016 aa30.84■■■□□ 2.53
SYNGR3-201ENST00000248121 MST1RQ04912 1400 aa30.83■■■□□ 2.53
SYNGR3-201ENST00000248121 PPP4R2Q9NY27 417 aa30.83■■■□□ 2.53
SYNGR3-201ENST00000248121 CFAP53Q96M91 514 aa30.82■■■□□ 2.52
SYNGR3-201ENST00000248121 TTC21AQ8NDW8 1320 aa30.82■■■□□ 2.52
SYNGR3-201ENST00000248121 RRS1Q15050 365 aaKnown RBP30.82■■■□□ 2.52
SYNGR3-201ENST00000248121 PELP1Q8IZL8 1130 aaKnown RBP30.82■■■□□ 2.52
SYNGR3-201ENST00000248121 NCOA3Q9Y6Q9 1424 aa30.8■■■□□ 2.52
SYNGR3-201ENST00000248121 PPM1GO15355 546 aaPredicted RBP30.8■■■□□ 2.52
SYNGR3-201ENST00000248121 AATKQ6ZMQ8 1374 aa30.79■■■□□ 2.52
SYNGR3-201ENST00000248121 DCCP43146 1447 aa30.79■■■□□ 2.52
SYNGR3-201ENST00000248121 PNPLA6Q8IY17 1366 aa30.78■■■□□ 2.52
SYNGR3-201ENST00000248121 NUTM2GQ5VZR2 741 aa30.78■■■□□ 2.52
SYNGR3-201ENST00000248121 PEAK1Q9H792 1746 aa30.78■■■□□ 2.52
SYNGR3-201ENST00000248121 USP54Q70EL1 1684 aa30.78■■■□□ 2.52
SYNGR3-201ENST00000248121 XPCQ01831 940 aaPredicted RBP30.77■■■□□ 2.52
SYNGR3-201ENST00000248121 GOLGA2Q08379 1002 aa30.77■■■□□ 2.52
SYNGR3-201ENST00000248121 DUSP27Q5VZP5 1158 aa30.77■■■□□ 2.52
SYNGR3-201ENST00000248121 KIF1AQ12756 1690 aa30.77■■■□□ 2.52
SYNGR3-201ENST00000248121 SOX12O15370 315 aa30.77■■■□□ 2.52
SYNGR3-201ENST00000248121 FOXO3O43524 673 aa30.76■■■□□ 2.51
SYNGR3-201ENST00000248121 PAK3O75914 559 aaPredicted RBP30.76■■■□□ 2.51
SYNGR3-201ENST00000248121 RRP1P56182 461 aaKnown RBP30.76■■■□□ 2.51
SYNGR3-201ENST00000248121 USP31Q70CQ4 1352 aa30.76■■■□□ 2.51
SYNGR3-201ENST00000248121 ATF3P18847 181 aa30.75■■■□□ 2.51
SYNGR3-201ENST00000248121 IQSEC2Q5JU85 1478 aa30.75■■■□□ 2.51
SYNGR3-201ENST00000248121 TRPM3Q9HCF6 1732 aaPredicted RBP30.75■■■□□ 2.51
SYNGR3-201ENST00000248121 MSH6P52701 1360 aa30.74■■■□□ 2.51
SYNGR3-201ENST00000248121 CDK12Q9NYV4 1490 aaPredicted RBP30.74■■■□□ 2.51
SYNGR3-201ENST00000248121 SLFN5Q08AF3 891 aa30.73■■■□□ 2.51
SYNGR3-201ENST00000248121 RUNDC1Q96C34 613 aa30.73■■■□□ 2.51
SYNGR3-201ENST00000248121 TRMT2AQ8IZ69 625 aaKnown RBP30.72■■■□□ 2.51
SYNGR3-201ENST00000248121 NGEFQ8N5V2 710 aa30.72■■■□□ 2.51
SYNGR3-201ENST00000248121 SPINK5Q9NQ38 1064 aaPredicted RBP30.72■■■□□ 2.51
SYNGR3-201ENST00000248121 PSME1Q06323 249 aa30.71■■■□□ 2.51
SYNGR3-201ENST00000248121 NLRP6P59044 892 aa30.7■■■□□ 2.51
SYNGR3-201ENST00000248121 DMRT2Q9Y5R5 561 aa30.7■■■□□ 2.51
SYNGR3-201ENST00000248121 ABTB2Q8N961 1025 aa30.7■■■□□ 2.5
SYNGR3-201ENST00000248121 DDX17Q92841 729 aaKnown RBP30.7■■■□□ 2.5
SYNGR3-201ENST00000248121 U2AF1L5P0DN76 240 aaPredicted RBP30.69■■■□□ 2.5
SYNGR3-201ENST00000248121 U2AF1Q01081 240 aaKnown RBP eCLIP30.69■■■□□ 2.5
SYNGR3-201ENST00000248121 U2SURPO15042 1029 aaKnown RBP30.69■■■□□ 2.5
SYNGR3-201ENST00000248121 B4GALNT3Q6L9W6 998 aa30.68■■■□□ 2.5
SYNGR3-201ENST00000248121 DIAPH1O60610 1272 aaKnown RBP30.67■■■□□ 2.5
SYNGR3-201ENST00000248121 CADPS2Q86UW7 1296 aa30.67■■■□□ 2.5
SYNGR3-201ENST00000248121 TCP11L2Q8N4U5 519 aa30.67■■■□□ 2.5
SYNGR3-201ENST00000248121 WWC1Q8IX03 1113 aa30.66■■■□□ 2.5
SYNGR3-201ENST00000248121 PHF23Q9BUL5 403 aaPredicted RBP30.64■■■□□ 2.5
SYNGR3-201ENST00000248121 RRP7AQ9Y3A4 280 aaKnown RBP30.64■■■□□ 2.5
SYNGR3-201ENST00000248121 MAP3K19Q56UN5 1328 aa30.63■■■□□ 2.49
SYNGR3-201ENST00000248121 LTN1O94822 1766 aa30.62■■■□□ 2.49
SYNGR3-201ENST00000248121 ALS2Q96Q42 1657 aa30.62■■■□□ 2.49
SYNGR3-201ENST00000248121 TSHZ2Q9NRE2 1034 aa30.61■■■□□ 2.49
SYNGR3-201ENST00000248121 IL13P35225 146 aa30.61■■■□□ 2.49
SYNGR3-201ENST00000248121 E9PSI1 815 aa30.6■■■□□ 2.49
SYNGR3-201ENST00000248121 NEUROD2Q15784 382 aa30.6■■■□□ 2.49
SYNGR3-201ENST00000248121 KRT28Q7Z3Y7 464 aa30.6■■■□□ 2.49
SYNGR3-201ENST00000248121 PLEKHF1Q96S99 279 aa30.59■■■□□ 2.49
SYNGR3-201ENST00000248121 NFAT5O94916 1531 aa30.59■■■□□ 2.49
SYNGR3-201ENST00000248121 HSP90AB2PQ58FF8 381 aa30.58■■■□□ 2.49
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms