RNA–Protein interactions for RNA: ENST00000244050.2

SNAI1-201, Transcript of snail family transcriptional repressor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNAI1, Length 1,686 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAI1-201ENST00000244050 SIRT1Q96EB6 747 aa16.77■□□□□ 0.28
SNAI1-201ENST00000244050 FANCIQ9NVI1 1328 aa16.76■□□□□ 0.27
SNAI1-201ENST00000244050 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.75■□□□□ 0.27
SNAI1-201ENST00000244050 LRP6O75581 1613 aa16.75■□□□□ 0.27
SNAI1-201ENST00000244050 ZNF521Q96K83 1311 aa16.74■□□□□ 0.27
SNAI1-201ENST00000244050 C19orf44Q9H6X5 657 aa16.74■□□□□ 0.27
SNAI1-201ENST00000244050 CGNL1Q0VF96 1302 aa16.74■□□□□ 0.27
SNAI1-201ENST00000244050 A0A1W2PP64 1363 aa16.74■□□□□ 0.27
SNAI1-201ENST00000244050 ROBO2Q9HCK4 1378 aa16.74■□□□□ 0.27
SNAI1-201ENST00000244050 TERF2IPQ9NYB0 399 aa16.73■□□□□ 0.27
SNAI1-201ENST00000244050 AMOTL2Q9Y2J4 779 aa16.73■□□□□ 0.27
SNAI1-201ENST00000244050 AHDC1Q5TGY3 1603 aaPredicted RBP16.73■□□□□ 0.27
SNAI1-201ENST00000244050 CADPS2Q86UW7 1296 aa16.72■□□□□ 0.27
SNAI1-201ENST00000244050 WASLO00401 505 aaPredicted RBP16.72■□□□□ 0.27
SNAI1-201ENST00000244050 C14orf37Q86TY3 774 aa16.72■□□□□ 0.27
SNAI1-201ENST00000244050 NGEFQ8N5V2 710 aa16.71■□□□□ 0.27
SNAI1-201ENST00000244050 POLR3AO14802 1390 aaPredicted RBP16.71■□□□□ 0.27
SNAI1-201ENST00000244050 CD163L1Q9NR16 1453 aa16.71■□□□□ 0.26
SNAI1-201ENST00000244050 ADGRB2O60241 1585 aa16.71■□□□□ 0.26
SNAI1-201ENST00000244050 ATF3P18847 181 aa16.7■□□□□ 0.26
SNAI1-201ENST00000244050 HDGFL2Q7Z4V5 671 aaPredicted RBP16.7■□□□□ 0.26
SNAI1-201ENST00000244050 MORC1Q86VD1 984 aa16.7■□□□□ 0.26
SNAI1-201ENST00000244050 NSD2O96028 1365 aa16.7■□□□□ 0.26
SNAI1-201ENST00000244050 SPATA31A6Q5VVP1 1343 aa16.69■□□□□ 0.26
SNAI1-201ENST00000244050 BRINP3Q76B58 766 aa16.69■□□□□ 0.26
SNAI1-201ENST00000244050 XRN1Q8IZH2 1706 aaKnown RBP16.69■□□□□ 0.26
SNAI1-201ENST00000244050 EXOC6Q8TAG9 804 aa16.69■□□□□ 0.26
SNAI1-201ENST00000244050 CABP1Q9NZU7 370 aa16.69■□□□□ 0.26
SNAI1-201ENST00000244050 ANKRD26Q9UPS8 1709 aa16.69■□□□□ 0.26
SNAI1-201ENST00000244050 ATP7BP35670 1465 aa16.69■□□□□ 0.26
SNAI1-201ENST00000244050 PTCH1Q13635 1447 aa16.69■□□□□ 0.26
SNAI1-201ENST00000244050 GOLGA2Q08379 1002 aa16.69■□□□□ 0.26
SNAI1-201ENST00000244050 DUSP27Q5VZP5 1158 aa16.69■□□□□ 0.26
SNAI1-201ENST00000244050 KIF20BQ96Q89 1820 aa16.68■□□□□ 0.26
SNAI1-201ENST00000244050 SHPRHQ149N8 1683 aa16.68■□□□□ 0.26
SNAI1-201ENST00000244050 TRMT2AQ8IZ69 625 aaKnown RBP16.67■□□□□ 0.26
SNAI1-201ENST00000244050 DCCP43146 1447 aa16.67■□□□□ 0.26
SNAI1-201ENST00000244050 PPIP5K1Q6PFW1 1433 aa16.67■□□□□ 0.26
SNAI1-201ENST00000244050 ANP32EQ9BTT0 268 aa16.66■□□□□ 0.26
SNAI1-201ENST00000244050 ITSN1Q15811 1721 aa16.66■□□□□ 0.26
SNAI1-201ENST00000244050 SLFN5Q08AF3 891 aa16.65■□□□□ 0.26
SNAI1-201ENST00000244050 MST1RQ04912 1400 aa16.65■□□□□ 0.26
SNAI1-201ENST00000244050 TNNT2P45379 298 aaPredicted RBP16.65■□□□□ 0.26
SNAI1-201ENST00000244050 NUDT16Q96DE0 195 aaKnown RBP16.65■□□□□ 0.26
SNAI1-201ENST00000244050 CDC42BPGQ6DT37 1551 aa16.64■□□□□ 0.25
SNAI1-201ENST00000244050 AKAP12Q02952 1782 aa16.63■□□□□ 0.25
SNAI1-201ENST00000244050 MON2Q7Z3U7 1717 aa16.63■□□□□ 0.25
SNAI1-201ENST00000244050 APAF1O14727 1248 aa16.62■□□□□ 0.25
SNAI1-201ENST00000244050 CCDC61Q9Y6R9 512 aa16.62■□□□□ 0.25
SNAI1-201ENST00000244050 TOPAZ1Q8N9V7 1692 aa16.62■□□□□ 0.25
SNAI1-201ENST00000244050 CCDC146Q8IYE0 955 aa16.62■□□□□ 0.25
SNAI1-201ENST00000244050 MEX3CQ5U5Q3 659 aaKnown RBP16.61■□□□□ 0.25
SNAI1-201ENST00000244050 ZNF772Q68DY9 489 aaPredicted RBP16.61■□□□□ 0.25
SNAI1-201ENST00000244050 GGNBP2Q9H3C7 697 aa16.61■□□□□ 0.25
SNAI1-201ENST00000244050 CPSF1Q10570 1443 aaKnown RBP16.6■□□□□ 0.25
SNAI1-201ENST00000244050 NHSL1Q5SYE7 1610 aa16.6■□□□□ 0.25
SNAI1-201ENST00000244050 FYB1O15117 783 aa16.6■□□□□ 0.25
SNAI1-201ENST00000244050 MSH5O43196 834 aa16.6■□□□□ 0.25
SNAI1-201ENST00000244050 PLIN1O60240 522 aa16.6■□□□□ 0.25
SNAI1-201ENST00000244050 PRR36Q9H6K5 1346 aa16.6■□□□□ 0.25
SNAI1-201ENST00000244050 ADGRL3Q9HAR2 1447 aa16.6■□□□□ 0.25
SNAI1-201ENST00000244050 E9PSI1 815 aa16.59■□□□□ 0.25
SNAI1-201ENST00000244050 EDC4Q6P2E9 1401 aaKnown RBP16.59■□□□□ 0.25
SNAI1-201ENST00000244050 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.59■□□□□ 0.25
SNAI1-201ENST00000244050 DDX17Q92841 729 aaKnown RBP16.59■□□□□ 0.25
SNAI1-201ENST00000244050 CRBNQ96SW2 442 aa16.59■□□□□ 0.25
SNAI1-201ENST00000244050 NUTM2BA6NNL0 878 aaPredicted RBP16.58■□□□□ 0.24
SNAI1-201ENST00000244050 NUTM2EB1AL46 878 aaPredicted RBP16.58■□□□□ 0.24
SNAI1-201ENST00000244050 NUTM2AQ8IVF1 878 aaPredicted RBP16.58■□□□□ 0.24
SNAI1-201ENST00000244050 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.58■□□□□ 0.24
SNAI1-201ENST00000244050 NALCNQ8IZF0 1738 aa16.57■□□□□ 0.24
SNAI1-201ENST00000244050 NUTM2FA1L443 756 aa16.57■□□□□ 0.24
SNAI1-201ENST00000244050 TCERG1O14776 1098 aaKnown RBP16.57■□□□□ 0.24
SNAI1-201ENST00000244050 MTHFSP49914 203 aa16.57■□□□□ 0.24
SNAI1-201ENST00000244050 UPF1Q92900 1129 aaKnown RBP eCLIP16.57■□□□□ 0.241e-7■■■■□ 23
SNAI1-201ENST00000244050 RGPD8O14715 1765 aaPredicted RBP16.57■□□□□ 0.24
SNAI1-201ENST00000244050 NCBP3Q53F19 620 aaKnown RBP16.56■□□□□ 0.24
SNAI1-201ENST00000244050 CFAP53Q96M91 514 aa16.56■□□□□ 0.24
SNAI1-201ENST00000244050 RUNDC1Q96C34 613 aa16.56■□□□□ 0.24
SNAI1-201ENST00000244050 ZNF692Q9BU19 519 aaPredicted RBP16.55■□□□□ 0.24
SNAI1-201ENST00000244050 SPINK5Q9NQ38 1064 aaPredicted RBP16.55■□□□□ 0.24
SNAI1-201ENST00000244050 AFF2P51816 1311 aa16.55■□□□□ 0.24
SNAI1-201ENST00000244050 PNPLA6Q8IY17 1366 aa16.54■□□□□ 0.24
SNAI1-201ENST00000244050 FMN2Q9NZ56 1722 aa16.54■□□□□ 0.24
SNAI1-201ENST00000244050 RXRBP28702 533 aa16.54■□□□□ 0.24
SNAI1-201ENST00000244050 LRRC59Q96AG4 307 aaKnown RBP16.54■□□□□ 0.24
SNAI1-201ENST00000244050 NRKQ7Z2Y5 1582 aa16.54■□□□□ 0.24
SNAI1-201ENST00000244050 C1orf167Q5SNV9 1468 aa16.54■□□□□ 0.24
SNAI1-201ENST00000244050 C20orf194Q5TEA3 1177 aa16.53■□□□□ 0.24
SNAI1-201ENST00000244050 WWC1Q8IX03 1113 aa16.53■□□□□ 0.24
SNAI1-201ENST00000244050 CDK12Q9NYV4 1490 aaPredicted RBP16.53■□□□□ 0.24
SNAI1-201ENST00000244050 MS4A1P11836 297 aa16.53■□□□□ 0.24
SNAI1-201ENST00000244050 ACEP12821 1306 aa16.52■□□□□ 0.24
SNAI1-201ENST00000244050 PLEKHG3A1L390 1219 aa16.52■□□□□ 0.23
SNAI1-201ENST00000244050 CCDC27Q2M243 656 aa16.51■□□□□ 0.23
SNAI1-201ENST00000244050 MAP2P11137 1827 aaKnown RBP16.51■□□□□ 0.23
SNAI1-201ENST00000244050 NME9Q86XW9 330 aa16.5■□□□□ 0.23
SNAI1-201ENST00000244050 ANKARQ7Z5J8 1434 aa16.5■□□□□ 0.23
SNAI1-201ENST00000244050 WDR63Q8IWG1 891 aa16.5■□□□□ 0.23
SNAI1-201ENST00000244050 USP6P35125 1406 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms