RNA–Protein interactions for RNA: ENST00000243108.4

HOXC6-201, Transcript of homeobox C6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC6, Length 1,733 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6-201ENST00000243108 CRYBG1Q9Y4K1 1723 aa24.49■■□□□ 1.51
HOXC6-201ENST00000243108 PLCH1Q4KWH8 1693 aa24.47■■□□□ 1.51
HOXC6-201ENST00000243108 UPF1Q92900 1129 aaKnown RBP eCLIP24.47■■□□□ 1.51
HOXC6-201ENST00000243108 CCDC61Q9Y6R9 512 aa24.47■■□□□ 1.51
HOXC6-201ENST00000243108 EP400Q96L91 3159 aa24.46■■□□□ 1.51
HOXC6-201ENST00000243108 POLR3AO14802 1390 aaPredicted RBP24.45■■□□□ 1.51
HOXC6-201ENST00000243108 ROCK2O75116 1388 aaKnown RBP24.45■■□□□ 1.51
HOXC6-201ENST00000243108 ACEP12821 1306 aa24.45■■□□□ 1.5
HOXC6-201ENST00000243108 HAP1P54257 671 aaPredicted RBP24.44■■□□□ 1.5
HOXC6-201ENST00000243108 CABP2Q9NPB3 220 aa24.44■■□□□ 1.5
HOXC6-201ENST00000243108 PLEKHG3A1L390 1219 aa24.44■■□□□ 1.5
HOXC6-201ENST00000243108 PAK3O75914 559 aaPredicted RBP24.44■■□□□ 1.5
HOXC6-201ENST00000243108 UNC5CLQ8IV45 518 aa24.44■■□□□ 1.5
HOXC6-201ENST00000243108 GLI3P10071 1580 aa24.43■■□□□ 1.5
HOXC6-201ENST00000243108 NWD2Q9ULI1 1742 aa24.43■■□□□ 1.5
HOXC6-201ENST00000243108 FAM83GA6ND36 823 aa24.42■■□□□ 1.5
HOXC6-201ENST00000243108 SRPK2P78362 688 aaKnown RBP24.41■■□□□ 1.5
HOXC6-201ENST00000243108 GJD4Q96KN9 370 aaPredicted RBP24.41■■□□□ 1.5
HOXC6-201ENST00000243108 PPIP5K1Q6PFW1 1433 aa24.4■■□□□ 1.5
HOXC6-201ENST00000243108 RALGAPBQ86X10 1494 aa24.39■■□□□ 1.5
HOXC6-201ENST00000243108 NRAPQ86VF7 1730 aa24.38■■□□□ 1.49
HOXC6-201ENST00000243108 PHRF1Q9P1Y6 1649 aaKnown RBP24.37■■□□□ 1.49
HOXC6-201ENST00000243108 NUTM2GQ5VZR2 741 aa24.36■■□□□ 1.49
HOXC6-201ENST00000243108 COL14A1Q05707 1796 aaKnown RBP24.35■■□□□ 1.49
HOXC6-201ENST00000243108 CABP1Q9NZU7 370 aa24.34■■□□□ 1.49
HOXC6-201ENST00000243108 VPS72Q15906 364 aa24.33■■□□□ 1.49
HOXC6-201ENST00000243108 BRWD3Q6RI45 1802 aa24.33■■□□□ 1.49
HOXC6-201ENST00000243108 EVC2Q86UK5 1308 aa24.32■■□□□ 1.48
HOXC6-201ENST00000243108 BTG4Q9NY30 223 aa24.32■■□□□ 1.48
HOXC6-201ENST00000243108 CARD11Q9BXL7 1154 aa24.3■■□□□ 1.48
HOXC6-201ENST00000243108 KIAA0232Q92628 1395 aa24.29■■□□□ 1.48
HOXC6-201ENST00000243108 ATAD2Q6PL18 1390 aa24.28■■□□□ 1.48
HOXC6-201ENST00000243108 NRKQ7Z2Y5 1582 aa24.28■■□□□ 1.48
HOXC6-201ENST00000243108 ABTB2Q8N961 1025 aa24.28■■□□□ 1.48
HOXC6-201ENST00000243108 USP6P35125 1406 aa24.28■■□□□ 1.48
HOXC6-201ENST00000243108 PRDM11Q9NQV5 511 aa24.27■■□□□ 1.48
HOXC6-201ENST00000243108 SSH2Q76I76 1423 aa24.26■■□□□ 1.47
HOXC6-201ENST00000243108 AKAP12Q02952 1782 aa24.26■■□□□ 1.47
HOXC6-201ENST00000243108 ZC3H6P61129 1189 aaKnown RBP24.26■■□□□ 1.47
HOXC6-201ENST00000243108 CHRNA2Q15822 529 aa24.26■■□□□ 1.47
HOXC6-201ENST00000243108 MIER1Q8N108 512 aa24.26■■□□□ 1.47
HOXC6-201ENST00000243108 CCDC9Q9Y3X0 531 aaKnown RBP24.26■■□□□ 1.47
HOXC6-201ENST00000243108 SBNO2Q9Y2G9 1366 aa24.26■■□□□ 1.47
HOXC6-201ENST00000243108 ONECUT3O60422 494 aaPredicted RBP24.25■■□□□ 1.47
HOXC6-201ENST00000243108 USP19O94966 1318 aa24.25■■□□□ 1.47
HOXC6-201ENST00000243108 SEPT12Q8IYM1 358 aa24.24■■□□□ 1.47
HOXC6-201ENST00000243108 PIK3C2AO00443 1686 aa24.23■■□□□ 1.47
HOXC6-201ENST00000243108 BRD4O60885 1362 aaPredicted RBP24.21■■□□□ 1.47
HOXC6-201ENST00000243108 LMO7Q8WWI1 1683 aa24.2■■□□□ 1.46
HOXC6-201ENST00000243108 SPATA31A5Q5VU36 1347 aa24.2■■□□□ 1.46
HOXC6-201ENST00000243108 SPATA31A7Q8IWB4 1347 aa24.2■■□□□ 1.46
HOXC6-201ENST00000243108 FAM98CQ17RN3 349 aaKnown RBP24.19■■□□□ 1.46
HOXC6-201ENST00000243108 NLRP13Q86W25 1043 aa24.19■■□□□ 1.46
HOXC6-201ENST00000243108 CPSF1Q10570 1443 aaKnown RBP24.19■■□□□ 1.46
HOXC6-201ENST00000243108 CAMTA1Q9Y6Y1 1673 aa24.19■■□□□ 1.46
HOXC6-201ENST00000243108 CPDO75976 1380 aa24.18■■□□□ 1.46
HOXC6-201ENST00000243108 GCP02774 474 aa24.18■■□□□ 1.46
HOXC6-201ENST00000243108 SLIT3O75094 1523 aa24.17■■□□□ 1.46
HOXC6-201ENST00000243108 MON2Q7Z3U7 1717 aa24.16■■□□□ 1.46
HOXC6-201ENST00000243108 NLRP6P59044 892 aa24.16■■□□□ 1.46
HOXC6-201ENST00000243108 CD163L1Q9NR16 1453 aa24.16■■□□□ 1.46
HOXC6-201ENST00000243108 TTC21BQ7Z4L5 1316 aa24.15■■□□□ 1.46
HOXC6-201ENST00000243108 THSD7AQ9UPZ6 1657 aa24.15■■□□□ 1.46
HOXC6-201ENST00000243108 TESK2Q96S53 571 aa24.15■■□□□ 1.46
HOXC6-201ENST00000243108 STRN4Q9NRL3 753 aa24.15■■□□□ 1.46
HOXC6-201ENST00000243108 ZNF692Q9BU19 519 aaPredicted RBP24.14■■□□□ 1.45
HOXC6-201ENST00000243108 SPATA31A1Q5TZJ5 1347 aa24.13■■□□□ 1.45
HOXC6-201ENST00000243108 ST20-MTHFSA0A0A6YYL1 179 aa24.13■■□□□ 1.45
HOXC6-201ENST00000243108 KRT27Q7Z3Y8 459 aa24.13■■□□□ 1.45
HOXC6-201ENST00000243108 KTN1Q86UP2 1357 aaKnown RBP24.12■■□□□ 1.45
HOXC6-201ENST00000243108 EIF4G2P78344 907 aaKnown RBP eCLIP24.11■■□□□ 1.45
HOXC6-201ENST00000243108 COL18A1P39060 1754 aa24.11■■□□□ 1.45
HOXC6-201ENST00000243108 A0A0G2JS52 829 aa24.1■■□□□ 1.45
HOXC6-201ENST00000243108 HSPA5P11021 654 aaKnown RBP24.1■■□□□ 1.45
HOXC6-201ENST00000243108 MYT1Q01538 1121 aa24.1■■□□□ 1.45
HOXC6-201ENST00000243108 SLC12A5Q9H2X9 1139 aa24.1■■□□□ 1.45
HOXC6-201ENST00000243108 LARP1Q6PKG0 1096 aaKnown RBP24.1■■□□□ 1.45
HOXC6-201ENST00000243108 COL5A2P05997 1499 aaPredicted RBP24.08■■□□□ 1.45
HOXC6-201ENST00000243108 TTC21AQ8NDW8 1320 aa24.08■■□□□ 1.44
HOXC6-201ENST00000243108 CCDC125Q86Z20 511 aa24.07■■□□□ 1.44
HOXC6-201ENST00000243108 TMC1Q8TDI8 760 aa24.07■■□□□ 1.44
HOXC6-201ENST00000243108 ZRANB1Q9UGI0 708 aa24.07■■□□□ 1.44
HOXC6-201ENST00000243108 SRCAPQ6ZRS2 3230 aa24.07■■□□□ 1.44
HOXC6-201ENST00000243108 EVA1CP58658 441 aa24.07■■□□□ 1.44
HOXC6-201ENST00000243108 FAM182BQ5T319 152 aa24.07■■□□□ 1.44
HOXC6-201ENST00000243108 USP35Q9P2H5 1018 aa24.07■■□□□ 1.44
HOXC6-201ENST00000243108 BLMP54132 1417 aaPredicted RBP24.07■■□□□ 1.44
HOXC6-201ENST00000243108 RGPD5Q99666 1765 aa24.06■■□□□ 1.44
HOXC6-201ENST00000243108 DDX10Q13206 875 aaKnown RBP24.06■■□□□ 1.44
HOXC6-201ENST00000243108 ZBTB7CA1YPR0 619 aa24.05■■□□□ 1.44
HOXC6-201ENST00000243108 NFAT5O94916 1531 aa24.05■■□□□ 1.44
HOXC6-201ENST00000243108 AATKQ6ZMQ8 1374 aa24.05■■□□□ 1.44
HOXC6-201ENST00000243108 SUGP2Q8IX01 1082 aaKnown RBP eCLIP24.04■■□□□ 1.44
HOXC6-201ENST00000243108 PUS7Q96PZ0 661 aaKnown RBP24.04■■□□□ 1.44
HOXC6-201ENST00000243108 AXIN2Q9Y2T1 843 aa24.04■■□□□ 1.44
HOXC6-201ENST00000243108 USP54Q70EL1 1684 aa24.04■■□□□ 1.44
HOXC6-201ENST00000243108 USP47Q96K76 1375 aa24.04■■□□□ 1.44
HOXC6-201ENST00000243108 A0A1W2PP64 1363 aa24.03■■□□□ 1.44
HOXC6-201ENST00000243108 SOX12O15370 315 aa24.03■■□□□ 1.44
HOXC6-201ENST00000243108 NME9Q86XW9 330 aa24.03■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms