RNA–Protein interactions for RNA: ENST00000242776.8

DDX39A-201, Transcript of DExD-box helicase 39A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX39A, Length 1,471 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-201ENST00000242776 TNS1Q9HBL0 1735 aaKnown RBP20.39■□□□□ 0.85
DDX39A-201ENST00000242776 PRR36Q9H6K5 1346 aa20.39■□□□□ 0.85
DDX39A-201ENST00000242776 EZH2Q15910 746 aaKnown RBP20.38■□□□□ 0.85
DDX39A-201ENST00000242776 KDM2AQ9Y2K7 1162 aa20.38■□□□□ 0.85
DDX39A-201ENST00000242776 SPATA31A5Q5VU36 1347 aa20.38■□□□□ 0.85
DDX39A-201ENST00000242776 SPATA31A7Q8IWB4 1347 aa20.38■□□□□ 0.85
DDX39A-201ENST00000242776 ACIN1Q9UKV3 1341 aaKnown RBP20.38■□□□□ 0.85
DDX39A-201ENST00000242776 ADGRB2O60241 1585 aa20.38■□□□□ 0.85
DDX39A-201ENST00000242776 NGDNQ8NEJ9 315 aaKnown RBP20.37■□□□□ 0.85
DDX39A-201ENST00000242776 PRDM11Q9NQV5 511 aa20.37■□□□□ 0.85
DDX39A-201ENST00000242776 DLC1Q96QB1 1528 aa20.37■□□□□ 0.85
DDX39A-201ENST00000242776 CRYBG1Q9Y4K1 1723 aa20.37■□□□□ 0.85
DDX39A-201ENST00000242776 CHRNA2Q15822 529 aa20.37■□□□□ 0.85
DDX39A-201ENST00000242776 STRN4Q9NRL3 753 aa20.37■□□□□ 0.85
DDX39A-201ENST00000242776 THSD7AQ9UPZ6 1657 aa20.35■□□□□ 0.85
DDX39A-201ENST00000242776 TRIM37O94972 964 aa20.35■□□□□ 0.85
DDX39A-201ENST00000242776 NUTM2GQ5VZR2 741 aa20.35■□□□□ 0.85
DDX39A-201ENST00000242776 USP35Q9P2H5 1018 aa20.34■□□□□ 0.85
DDX39A-201ENST00000242776 TULP4Q9NRJ4 1543 aa20.34■□□□□ 0.85
DDX39A-201ENST00000242776 ADGRB1O14514 1584 aa20.34■□□□□ 0.85
DDX39A-201ENST00000242776 WASLO00401 505 aaPredicted RBP20.32■□□□□ 0.84
DDX39A-201ENST00000242776 ZC3H6P61129 1189 aaKnown RBP20.31■□□□□ 0.84
DDX39A-201ENST00000242776 KIAA0232Q92628 1395 aa20.31■□□□□ 0.84
DDX39A-201ENST00000242776 EIF3AQ14152 1382 aaKnown RBP20.3■□□□□ 0.84
DDX39A-201ENST00000242776 PHRF1Q9P1Y6 1649 aaKnown RBP20.3■□□□□ 0.84
DDX39A-201ENST00000242776 APBA3O96018 575 aa20.3■□□□□ 0.84
DDX39A-201ENST00000242776 DCAF11Q8TEB1 546 aa20.3■□□□□ 0.84
DDX39A-201ENST00000242776 SPATA31A1Q5TZJ5 1347 aa20.3■□□□□ 0.84
DDX39A-201ENST00000242776 ITSN1Q15811 1721 aa20.28■□□□□ 0.84
DDX39A-201ENST00000242776 CAMKK2Q96RR4 588 aa20.27■□□□□ 0.84
DDX39A-201ENST00000242776 DISP2A7MBM2 1401 aa20.26■□□□□ 0.83
DDX39A-201ENST00000242776 EVA1CP58658 441 aa20.26■□□□□ 0.83
DDX39A-201ENST00000242776 FAM196AQ6ZSG2 479 aa20.26■□□□□ 0.83
DDX39A-201ENST00000242776 NUDT16Q96DE0 195 aaKnown RBP20.25■□□□□ 0.83
DDX39A-201ENST00000242776 ARHGEF28Q8N1W1 1705 aaKnown RBP20.25■□□□□ 0.83
DDX39A-201ENST00000242776 PDE3BQ13370 1112 aa20.24■□□□□ 0.83
DDX39A-201ENST00000242776 ATP7BP35670 1465 aa20.23■□□□□ 0.83
DDX39A-201ENST00000242776 RAB3GAP2Q9H2M9 1393 aa20.22■□□□□ 0.83
DDX39A-201ENST00000242776 NUP188Q5SRE5 1749 aa20.22■□□□□ 0.83
DDX39A-201ENST00000242776 RREB1Q92766 1687 aa20.21■□□□□ 0.83
DDX39A-201ENST00000242776 ZBTB7CA1YPR0 619 aa20.2■□□□□ 0.82
DDX39A-201ENST00000242776 LARP1Q6PKG0 1096 aaKnown RBP20.2■□□□□ 0.82
DDX39A-201ENST00000242776 CDK19Q9BWU1 502 aa20.2■□□□□ 0.82
DDX39A-201ENST00000242776 SSH2Q76I76 1423 aa20.19■□□□□ 0.82
DDX39A-201ENST00000242776 ACEP12821 1306 aa20.19■□□□□ 0.82
DDX39A-201ENST00000242776 YY1P25490 414 aa20.18■□□□□ 0.82
DDX39A-201ENST00000242776 ABTB2Q8N961 1025 aa20.18■□□□□ 0.82
DDX39A-201ENST00000242776 NRKQ7Z2Y5 1582 aa20.17■□□□□ 0.82
DDX39A-201ENST00000242776 CAMTA1Q9Y6Y1 1673 aa20.17■□□□□ 0.82
DDX39A-201ENST00000242776 NBPF8Q3BBV2 869 aa20.17■□□□□ 0.82
DDX39A-201ENST00000242776 NBPF14Q5TI25 921 aa20.17■□□□□ 0.82
DDX39A-201ENST00000242776 TOPAZ1Q8N9V7 1692 aa20.16■□□□□ 0.82
DDX39A-201ENST00000242776 PPP1R1BQ9UD71 204 aaPredicted RBP20.16■□□□□ 0.82
DDX39A-201ENST00000242776 BARGINQ6ZT62 677 aa20.15■□□□□ 0.82
DDX39A-201ENST00000242776 TCP11L2Q8N4U5 519 aa20.15■□□□□ 0.82
DDX39A-201ENST00000242776 PARD3Q8TEW0 1356 aa20.14■□□□□ 0.82
DDX39A-201ENST00000242776 LMO7Q8WWI1 1683 aa20.12■□□□□ 0.81
DDX39A-201ENST00000242776 POLR3AO14802 1390 aaPredicted RBP20.11■□□□□ 0.81
DDX39A-201ENST00000242776 CCDC61Q9Y6R9 512 aa20.11■□□□□ 0.81
DDX39A-201ENST00000242776 SPON1Q9HCB6 807 aa20.1■□□□□ 0.81
DDX39A-201ENST00000242776 PARP4Q9UKK3 1724 aaKnown RBP20.09■□□□□ 0.81
DDX39A-201ENST00000242776 KCNQ2O43526 872 aa20.08■□□□□ 0.81
DDX39A-201ENST00000242776 GCP02774 474 aa20.08■□□□□ 0.81
DDX39A-201ENST00000242776 SRPK2P78362 688 aaKnown RBP20.08■□□□□ 0.81
DDX39A-201ENST00000242776 NLRP13Q86W25 1043 aa20.07■□□□□ 0.8
DDX39A-201ENST00000242776 SBF2Q86WG5 1849 aa20.07■□□□□ 0.8
DDX39A-201ENST00000242776 PLEKHG3A1L390 1219 aa20.06■□□□□ 0.8
DDX39A-201ENST00000242776 CABP2Q9NPB3 220 aa20.06■□□□□ 0.8
DDX39A-201ENST00000242776 USP19O94966 1318 aa20.06■□□□□ 0.8
DDX39A-201ENST00000242776 CPDO75976 1380 aa20.06■□□□□ 0.8
DDX39A-201ENST00000242776 PPIP5K1Q6PFW1 1433 aa20.06■□□□□ 0.8
DDX39A-201ENST00000242776 COL5A2P05997 1499 aaPredicted RBP20.06■□□□□ 0.8
DDX39A-201ENST00000242776 DCAF8L1A6NGE4 600 aa20.05■□□□□ 0.8
DDX39A-201ENST00000242776 THRAP3Q9Y2W1 955 aaKnown RBP20.05■□□□□ 0.8
DDX39A-201ENST00000242776 NBPF1Q3BBV0 1214 aa20.05■□□□□ 0.8
DDX39A-201ENST00000242776 PTF1AQ7RTS3 328 aa20.05■□□□□ 0.8
DDX39A-201ENST00000242776 STAC3Q96MF2 364 aa20.04■□□□□ 0.8
DDX39A-201ENST00000242776 LRRC37A3O60309 1634 aa20.03■□□□□ 0.8
DDX39A-201ENST00000242776 CRB1P82279 1406 aa20.03■□□□□ 0.8
DDX39A-201ENST00000242776 PEAK1Q9H792 1746 aa20.03■□□□□ 0.8
DDX39A-201ENST00000242776 ANO8Q9HCE9 1232 aaPredicted RBP20.03■□□□□ 0.8
DDX39A-201ENST00000242776 OVOS2A0A0G2JMS6 1433 aa20.02■□□□□ 0.8
DDX39A-201ENST00000242776 OVOS2A0A0J9YW53 1432 aa20.02■□□□□ 0.8
DDX39A-201ENST00000242776 OVOS2Q6IE36 1432 aa20.02■□□□□ 0.8
DDX39A-201ENST00000242776 NLRP6P59044 892 aa20.02■□□□□ 0.8
DDX39A-201ENST00000242776 TOM1L2Q6ZVM7 507 aa20.02■□□□□ 0.8
DDX39A-201ENST00000242776 PDGFDQ9GZP0 370 aaPredicted RBP20.02■□□□□ 0.8
DDX39A-201ENST00000242776 SOX12O15370 315 aa20■□□□□ 0.79
DDX39A-201ENST00000242776 DDB1Q16531 1140 aa20■□□□□ 0.79
DDX39A-201ENST00000242776 BCL11BQ9C0K0 894 aaPredicted RBP20■□□□□ 0.79
DDX39A-201ENST00000242776 RGPD5Q99666 1765 aa20■□□□□ 0.79
DDX39A-201ENST00000242776 KIAA1210Q9ULL0 1709 aa20■□□□□ 0.79
DDX39A-201ENST00000242776 QRICH2Q9H0J4 1663 aa20■□□□□ 0.79
DDX39A-201ENST00000242776 ZBTB7AO95365 584 aa19.99■□□□□ 0.79
DDX39A-201ENST00000242776 AKAP12Q02952 1782 aa19.99■□□□□ 0.79
DDX39A-201ENST00000242776 WNK3Q9BYP7 1800 aa19.99■□□□□ 0.79
DDX39A-201ENST00000242776 CABP1Q9NZU7 370 aa19.99■□□□□ 0.79
DDX39A-201ENST00000242776 NINLQ9Y2I6 1382 aa19.98■□□□□ 0.79
DDX39A-201ENST00000242776 CASZ1Q86V15 1759 aa19.97■□□□□ 0.79
DDX39A-201ENST00000242776 CENPJQ9HC77 1338 aaPredicted RBP19.97■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms